RNA–Protein interactions for RNA: ENST00000340450.7

CAP1-201, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CAP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-201ENST00000340450 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
CAP1-201ENST00000340450 AEBP2Q6ZN18 517 aaPredicted RBP17.46■□□□□ 0.39
CAP1-201ENST00000340450 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
CAP1-201ENST00000340450 ABCC9O60706 1549 aa17.11■□□□□ 0.33
CAP1-201ENST00000340450 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
CAP1-201ENST00000340450 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.21
CAP1-201ENST00000340450 RB1CC1Q8TDY2 1594 aa16.29■□□□□ 0.2
CAP1-201ENST00000340450 NACADO15069 1562 aa16.23■□□□□ 0.19
CAP1-201ENST00000340450 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.16
CAP1-201ENST00000340450 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
CAP1-201ENST00000340450 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
CAP1-201ENST00000340450 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
CAP1-201ENST00000340450 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
CAP1-201ENST00000340450 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
CAP1-201ENST00000340450 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
CAP1-201ENST00000340450 SCRIBQ14160 1630 aa15.77■□□□□ 0.11
CAP1-201ENST00000340450 SHROOM4Q9ULL8 1493 aa15.57■□□□□ 0.08
CAP1-201ENST00000340450 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
CAP1-201ENST00000340450 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
CAP1-201ENST00000340450 CECR2Q9BXF3 1484 aa15.37■□□□□ 0.05
CAP1-201ENST00000340450 SMARCA4P51532 1647 aa15.03■□□□□ -0
CAP1-201ENST00000340450 NCAPD3P42695 1498 aa15.02■□□□□ -0
CAP1-201ENST00000340450 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
CAP1-201ENST00000340450 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
CAP1-201ENST00000340450 MROH2BQ7Z745 1585 aa14.95□□□□□ -0.02
CAP1-201ENST00000340450 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
CAP1-201ENST00000340450 HMGXB3Q12766 1538 aa14.89□□□□□ -0.03
CAP1-201ENST00000340450 BAZ1BQ9UIG0 1483 aaKnown RBP14.87□□□□□ -0.03
CAP1-201ENST00000340450 PEG3Q9GZU2 1588 aa14.86□□□□□ -0.03
CAP1-201ENST00000340450 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
CAP1-201ENST00000340450 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
CAP1-201ENST00000340450 NESP48681 1621 aa14.77□□□□□ -0.04
CAP1-201ENST00000340450 WIZO95785 1651 aa14.76□□□□□ -0.05
CAP1-201ENST00000340450 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
CAP1-201ENST00000340450 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
CAP1-201ENST00000340450 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
CAP1-201ENST00000340450 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
CAP1-201ENST00000340450 CUX2O14529 1486 aa14.58□□□□□ -0.08
CAP1-201ENST00000340450 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
CAP1-201ENST00000340450 PDS5BQ9NTI5 1447 aa14.54□□□□□ -0.08
CAP1-201ENST00000340450 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.09
CAP1-201ENST00000340450 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
CAP1-201ENST00000340450 CFTRP13569 1480 aa14.46□□□□□ -0.09
CAP1-201ENST00000340450 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
CAP1-201ENST00000340450 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
CAP1-201ENST00000340450 MRC2Q9UBG0 1479 aa14.41□□□□□ -0.1
CAP1-201ENST00000340450 DNAJC5Q9H3Z4 198 aa14.41□□□□□ -0.1
CAP1-201ENST00000340450 CEP164Q9UPV0 1460 aa14.4□□□□□ -0.1
CAP1-201ENST00000340450 WDR62O43379 1518 aa14.36□□□□□ -0.11
CAP1-201ENST00000340450 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
CAP1-201ENST00000340450 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
CAP1-201ENST00000340450 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
CAP1-201ENST00000340450 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
CAP1-201ENST00000340450 ZNF608Q9ULD9 1512 aaPredicted RBP14.12□□□□□ -0.15
CAP1-201ENST00000340450 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
CAP1-201ENST00000340450 IFT140Q96RY7 1462 aa14.09□□□□□ -0.15
CAP1-201ENST00000340450 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
CAP1-201ENST00000340450 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
CAP1-201ENST00000340450 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
CAP1-201ENST00000340450 AQRO60306 1485 aaKnown RBP eCLIP14.02□□□□□ -0.171e-6■■■■□ 21.4
CAP1-201ENST00000340450 CUX1P39880 1505 aa14.02□□□□□ -0.17
CAP1-201ENST00000340450 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
CAP1-201ENST00000340450 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
CAP1-201ENST00000340450 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
CAP1-201ENST00000340450 SOGA1O94964 1423 aa13.99□□□□□ -0.17
CAP1-201ENST00000340450 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
CAP1-201ENST00000340450 TDRD9Q8NDG6 1382 aaKnown RBP13.98□□□□□ -0.17
CAP1-201ENST00000340450 FBLN2P98095 1184 aa13.9□□□□□ -0.18
CAP1-201ENST00000340450 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
CAP1-201ENST00000340450 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.192e-8■■■□□ 16.7
CAP1-201ENST00000340450 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
CAP1-201ENST00000340450 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
CAP1-201ENST00000340450 CHD1O14646 1710 aa13.83□□□□□ -0.19
CAP1-201ENST00000340450 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
CAP1-201ENST00000340450 GRIN2BQ13224 1484 aa13.82□□□□□ -0.2
CAP1-201ENST00000340450 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
CAP1-201ENST00000340450 GAPVD1Q14C86 1478 aa13.81□□□□□ -0.2
CAP1-201ENST00000340450 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
CAP1-201ENST00000340450 CHMP7Q8WUX9 453 aaPredicted RBP13.79□□□□□ -0.2
CAP1-201ENST00000340450 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
CAP1-201ENST00000340450 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
CAP1-201ENST00000340450 FOXD1Q16676 465 aa13.78□□□□□ -0.2
CAP1-201ENST00000340450 ARHGEF11O15085 1522 aa13.77□□□□□ -0.2
CAP1-201ENST00000340450 RIMBP3CA6NJZ7 1639 aa13.77□□□□□ -0.2
CAP1-201ENST00000340450 RIMBP3BA6NNM3 1639 aa13.77□□□□□ -0.2
CAP1-201ENST00000340450 RIMBP3Q9UFD9 1639 aa13.77□□□□□ -0.2
CAP1-201ENST00000340450 ABCA5Q8WWZ7 1642 aa13.77□□□□□ -0.21
CAP1-201ENST00000340450 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
CAP1-201ENST00000340450 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
CAP1-201ENST00000340450 CYB5RLQ6IPT4 315 aa13.71□□□□□ -0.21
CAP1-201ENST00000340450 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
CAP1-201ENST00000340450 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
CAP1-201ENST00000340450 GRIN2AQ12879 1464 aa13.65□□□□□ -0.22
CAP1-201ENST00000340450 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
CAP1-201ENST00000340450 FHAD1B1AJZ9 1412 aa13.64□□□□□ -0.23
CAP1-201ENST00000340450 ERICH3Q5RHP9 1530 aa13.63□□□□□ -0.23
CAP1-201ENST00000340450 PLPPR3Q6T4P5 718 aa13.61□□□□□ -0.23
CAP1-201ENST00000340450 NUP160Q12769 1436 aa13.6□□□□□ -0.23
CAP1-201ENST00000340450 CEP170Q5SW79 1584 aa13.6□□□□□ -0.23
CAP1-201ENST00000340450 IGF1RP08069 1367 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms