RNA–Protein interactions for RNA: ENST00000464661.5

HM13-209, Transcript of histocompatibility minor 13, humanhuman

TSL 3

Gene HM13, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-209ENST00000464661 NISCHQ9Y2I1 1504 aa28.51■■■□□ 2.15
HM13-209ENST00000464661 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
HM13-209ENST00000464661 ABCC9O60706 1549 aa25.04■■□□□ 1.6
HM13-209ENST00000464661 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
HM13-209ENST00000464661 NACADO15069 1562 aa24.05■■□□□ 1.44
HM13-209ENST00000464661 DCAF8L2P0C7V8 631 aa23.94■■□□□ 1.42
HM13-209ENST00000464661 MYO15BQ96JP2 1530 aa23.92■■□□□ 1.42
HM13-209ENST00000464661 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
HM13-209ENST00000464661 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
HM13-209ENST00000464661 PABPN1Q86U42 306 aaKnown RBP eCLIP23.39■■□□□ 1.33
HM13-209ENST00000464661 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
HM13-209ENST00000464661 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
HM13-209ENST00000464661 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
HM13-209ENST00000464661 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
HM13-209ENST00000464661 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
HM13-209ENST00000464661 EIF4G1Q04637 1599 aaKnown RBP22.7■■□□□ 1.22
HM13-209ENST00000464661 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
HM13-209ENST00000464661 CECR2Q9BXF3 1484 aa22.61■■□□□ 1.21
HM13-209ENST00000464661 NCAPD3P42695 1498 aa22.23■■□□□ 1.15
HM13-209ENST00000464661 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.13
HM13-209ENST00000464661 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
HM13-209ENST00000464661 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
HM13-209ENST00000464661 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
HM13-209ENST00000464661 HMGXB3Q12766 1538 aa22.03■■□□□ 1.12
HM13-209ENST00000464661 PEG3Q9GZU2 1588 aa21.97■■□□□ 1.11
HM13-209ENST00000464661 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
HM13-209ENST00000464661 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
HM13-209ENST00000464661 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
HM13-209ENST00000464661 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
HM13-209ENST00000464661 CUX2O14529 1486 aa21.63■■□□□ 1.05
HM13-209ENST00000464661 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
HM13-209ENST00000464661 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.05
HM13-209ENST00000464661 CADPSQ9ULU8 1353 aa21.58■■□□□ 1.04
HM13-209ENST00000464661 NESP48681 1621 aa21.55■■□□□ 1.04
HM13-209ENST00000464661 WIZO95785 1651 aa21.54■■□□□ 1.04
HM13-209ENST00000464661 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
HM13-209ENST00000464661 CFTRP13569 1480 aa21.36■■□□□ 1.01
HM13-209ENST00000464661 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
HM13-209ENST00000464661 MRC2Q9UBG0 1479 aa21.26■□□□□ 0.99
HM13-209ENST00000464661 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
HM13-209ENST00000464661 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
HM13-209ENST00000464661 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
HM13-209ENST00000464661 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
HM13-209ENST00000464661 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
HM13-209ENST00000464661 WDR62O43379 1518 aa21.17■□□□□ 0.98
HM13-209ENST00000464661 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
HM13-209ENST00000464661 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
HM13-209ENST00000464661 PRDM2Q13029 1718 aa20.93■□□□□ 0.94
HM13-209ENST00000464661 SUPT5HO00267 1087 aaKnown RBP20.88■□□□□ 0.93
HM13-209ENST00000464661 IFT140Q96RY7 1462 aa20.86■□□□□ 0.93
HM13-209ENST00000464661 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
HM13-209ENST00000464661 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
HM13-209ENST00000464661 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
HM13-209ENST00000464661 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
HM13-209ENST00000464661 SOGA1O94964 1423 aa20.64■□□□□ 0.89
HM13-209ENST00000464661 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
HM13-209ENST00000464661 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
HM13-209ENST00000464661 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
HM13-209ENST00000464661 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
HM13-209ENST00000464661 CUX1P39880 1505 aa20.54■□□□□ 0.88
HM13-209ENST00000464661 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.887e-8■■■■□ 23.3
HM13-209ENST00000464661 RAD54L2Q9Y4B4 1467 aa20.51■□□□□ 0.87
HM13-209ENST00000464661 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
HM13-209ENST00000464661 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
HM13-209ENST00000464661 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
HM13-209ENST00000464661 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
HM13-209ENST00000464661 FBLN2P98095 1184 aa20.41■□□□□ 0.86
HM13-209ENST00000464661 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
HM13-209ENST00000464661 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
HM13-209ENST00000464661 CHMP7Q8WUX9 453 aaPredicted RBP20.39■□□□□ 0.85
HM13-209ENST00000464661 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
HM13-209ENST00000464661 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
HM13-209ENST00000464661 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
HM13-209ENST00000464661 TRIM41Q8WV44 630 aa20.33■□□□□ 0.85
HM13-209ENST00000464661 SYNJ2O15056 1496 aa20.31■□□□□ 0.84
HM13-209ENST00000464661 BIVM-ERCC5R4GMW8 1640 aa20.28■□□□□ 0.84
HM13-209ENST00000464661 ARHGEF11O15085 1522 aa20.23■□□□□ 0.83
HM13-209ENST00000464661 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
HM13-209ENST00000464661 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
HM13-209ENST00000464661 CHD1O14646 1710 aa20.19■□□□□ 0.82
HM13-209ENST00000464661 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
HM13-209ENST00000464661 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
HM13-209ENST00000464661 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
HM13-209ENST00000464661 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
HM13-209ENST00000464661 FHAD1B1AJZ9 1412 aa20.17■□□□□ 0.82
HM13-209ENST00000464661 CYB5RLQ6IPT4 315 aa20.14■□□□□ 0.81
HM13-209ENST00000464661 CLASP1Q7Z460 1538 aa20.13■□□□□ 0.81
HM13-209ENST00000464661 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
HM13-209ENST00000464661 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
HM13-209ENST00000464661 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
HM13-209ENST00000464661 NUP160Q12769 1436 aa20.08■□□□□ 0.8
HM13-209ENST00000464661 ADAMTS12P58397 1594 aa20.05■□□□□ 0.8
HM13-209ENST00000464661 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
HM13-209ENST00000464661 IGF1RP08069 1367 aa20.01■□□□□ 0.79
HM13-209ENST00000464661 JPH4Q96JJ6 628 aa19.94■□□□□ 0.78
HM13-209ENST00000464661 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
HM13-209ENST00000464661 CARMIL1Q5VZK9 1371 aa19.9■□□□□ 0.78
HM13-209ENST00000464661 CUL7Q14999 1698 aa19.87■□□□□ 0.77
HM13-209ENST00000464661 KIAA0586Q9BVV6 1533 aa19.86■□□□□ 0.77
HM13-209ENST00000464661 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms