RNA–Protein interactions for RNA: ENST00000435719.5

CAP1-214, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 3

Gene CAP1, Length 817 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-214ENST00000435719 NISCHQ9Y2I1 1504 aa30.65■■■□□ 2.5
CAP1-214ENST00000435719 CCDC180Q9P1Z9 1646 aa27.13■■□□□ 1.93
CAP1-214ENST00000435719 ABCC9O60706 1549 aa26.06■■□□□ 1.76
CAP1-214ENST00000435719 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
CAP1-214ENST00000435719 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
CAP1-214ENST00000435719 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
CAP1-214ENST00000435719 NACADO15069 1562 aa25.36■■□□□ 1.65
CAP1-214ENST00000435719 MYO15BQ96JP2 1530 aa25.33■■□□□ 1.65
CAP1-214ENST00000435719 RB1CC1Q8TDY2 1594 aa25.31■■□□□ 1.64
CAP1-214ENST00000435719 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
CAP1-214ENST00000435719 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
CAP1-214ENST00000435719 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
CAP1-214ENST00000435719 BICRAQ9NZM4 1560 aa24.44■■□□□ 1.5
CAP1-214ENST00000435719 PABPN1Q86U42 306 aaKnown RBP eCLIP24.36■■□□□ 1.49
CAP1-214ENST00000435719 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
CAP1-214ENST00000435719 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
CAP1-214ENST00000435719 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
CAP1-214ENST00000435719 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
CAP1-214ENST00000435719 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
CAP1-214ENST00000435719 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
CAP1-214ENST00000435719 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
CAP1-214ENST00000435719 SMARCA2P51531 1590 aa23.49■■□□□ 1.35
CAP1-214ENST00000435719 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
CAP1-214ENST00000435719 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
CAP1-214ENST00000435719 WIZO95785 1651 aa23.41■■□□□ 1.34
CAP1-214ENST00000435719 HMGXB3Q12766 1538 aa23.35■■□□□ 1.33
CAP1-214ENST00000435719 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
CAP1-214ENST00000435719 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
CAP1-214ENST00000435719 NCAPD3P42695 1498 aa23.33■■□□□ 1.33
CAP1-214ENST00000435719 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
CAP1-214ENST00000435719 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
CAP1-214ENST00000435719 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
CAP1-214ENST00000435719 LAMC3Q9Y6N6 1575 aa22.72■■□□□ 1.23
CAP1-214ENST00000435719 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
CAP1-214ENST00000435719 CFTRP13569 1480 aa22.66■■□□□ 1.22
CAP1-214ENST00000435719 NESP48681 1621 aa22.65■■□□□ 1.22
CAP1-214ENST00000435719 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
CAP1-214ENST00000435719 PDS5BQ9NTI5 1447 aa22.54■■□□□ 1.2
CAP1-214ENST00000435719 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
CAP1-214ENST00000435719 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
CAP1-214ENST00000435719 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
CAP1-214ENST00000435719 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
CAP1-214ENST00000435719 MRC2Q9UBG0 1479 aa22.31■■□□□ 1.16
CAP1-214ENST00000435719 THOC2Q8NI27 1593 aaKnown RBP22.28■■□□□ 1.16
CAP1-214ENST00000435719 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
CAP1-214ENST00000435719 DNMBPQ6XZF7 1577 aa22.21■■□□□ 1.15
CAP1-214ENST00000435719 WDR62O43379 1518 aa22.21■■□□□ 1.15
CAP1-214ENST00000435719 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.142e-8■■■□□ 16.7
CAP1-214ENST00000435719 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.14
CAP1-214ENST00000435719 CUX1P39880 1505 aa22.16■■□□□ 1.14
CAP1-214ENST00000435719 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
CAP1-214ENST00000435719 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
CAP1-214ENST00000435719 TOP2BQ02880 1626 aa22.11■■□□□ 1.13
CAP1-214ENST00000435719 BIVM-ERCC5R4GMW8 1640 aa22.11■■□□□ 1.13
CAP1-214ENST00000435719 CUX2O14529 1486 aa22.05■■□□□ 1.12
CAP1-214ENST00000435719 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
CAP1-214ENST00000435719 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
CAP1-214ENST00000435719 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
CAP1-214ENST00000435719 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
CAP1-214ENST00000435719 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
CAP1-214ENST00000435719 SOGA1O94964 1423 aa21.89■■□□□ 1.1
CAP1-214ENST00000435719 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
CAP1-214ENST00000435719 TARBP1Q13395 1621 aaKnown RBP21.87■■□□□ 1.09
CAP1-214ENST00000435719 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
CAP1-214ENST00000435719 ABCA10Q8WWZ4 1543 aa21.83■■□□□ 1.09
CAP1-214ENST00000435719 EIF4G3O43432 1585 aaKnown RBP21.76■■□□□ 1.07
CAP1-214ENST00000435719 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
CAP1-214ENST00000435719 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
CAP1-214ENST00000435719 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
CAP1-214ENST00000435719 TDRD9Q8NDG6 1382 aaKnown RBP21.7■■□□□ 1.06
CAP1-214ENST00000435719 GAPVD1Q14C86 1478 aa21.68■■□□□ 1.06
CAP1-214ENST00000435719 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.061e-6■■■■□ 24.9
CAP1-214ENST00000435719 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
CAP1-214ENST00000435719 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
CAP1-214ENST00000435719 EEA1Q15075 1411 aa21.62■■□□□ 1.05
CAP1-214ENST00000435719 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
CAP1-214ENST00000435719 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
CAP1-214ENST00000435719 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
CAP1-214ENST00000435719 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
CAP1-214ENST00000435719 CUL7Q14999 1698 aa21.53■■□□□ 1.04
CAP1-214ENST00000435719 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
CAP1-214ENST00000435719 FAM9AQ8IZU1 332 aaPredicted RBP21.49■■□□□ 1.03
CAP1-214ENST00000435719 IGF1RP08069 1367 aa21.47■■□□□ 1.03
CAP1-214ENST00000435719 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
CAP1-214ENST00000435719 SYNJ2O15056 1496 aa21.44■■□□□ 1.02
CAP1-214ENST00000435719 CSRNP3Q8WYN3 585 aa21.42■■□□□ 1.02
CAP1-214ENST00000435719 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
CAP1-214ENST00000435719 CHD1O14646 1710 aa21.39■■□□□ 1.01
CAP1-214ENST00000435719 PRXQ9BXM0 1461 aa21.37■■□□□ 1.01
CAP1-214ENST00000435719 KIF21BO75037 1637 aa21.37■■□□□ 1.01
CAP1-214ENST00000435719 RAPGEF2Q9Y4G8 1499 aa21.36■■□□□ 1.01
CAP1-214ENST00000435719 FBLN2P98095 1184 aa21.35■■□□□ 1.01
CAP1-214ENST00000435719 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
CAP1-214ENST00000435719 GRIN2AQ12879 1464 aa21.34■■□□□ 1.01
CAP1-214ENST00000435719 GOLGA3Q08378 1498 aa21.28■■□□□ 1
CAP1-214ENST00000435719 CEP170Q5SW79 1584 aa21.22■□□□□ 0.99
CAP1-214ENST00000435719 NUP160Q12769 1436 aa21.21■□□□□ 0.99
CAP1-214ENST00000435719 CTTNBP2Q8WZ74 1663 aa21.2■□□□□ 0.98
CAP1-214ENST00000435719 EHMT2Q96KQ7 1210 aa21.19■□□□□ 0.98
CAP1-214ENST00000435719 OSCARQ8IYS5 282 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms