RNA–Protein interactions for RNA: ENST00000460225.5

HM13-205, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-205ENST00000460225 NISCHQ9Y2I1 1504 aa34.06■■■■□ 3.04
HM13-205ENST00000460225 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
HM13-205ENST00000460225 ABCC9O60706 1549 aa30.04■■■□□ 2.4
HM13-205ENST00000460225 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
HM13-205ENST00000460225 NACADO15069 1562 aa28.67■■■□□ 2.18
HM13-205ENST00000460225 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
HM13-205ENST00000460225 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
HM13-205ENST00000460225 ZCCHC6Q5VYS8 1495 aaKnown RBP28.33■■■□□ 2.13
HM13-205ENST00000460225 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
HM13-205ENST00000460225 DCAF1Q9Y4B6 1507 aa28.16■■■□□ 2.1
HM13-205ENST00000460225 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
HM13-205ENST00000460225 BICRAQ9NZM4 1560 aa27.92■■■□□ 2.06
HM13-205ENST00000460225 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
HM13-205ENST00000460225 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
HM13-205ENST00000460225 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
HM13-205ENST00000460225 EIF4G1Q04637 1599 aaKnown RBP27.21■■□□□ 1.95
HM13-205ENST00000460225 CC2D2AQ9P2K1 1620 aa27.18■■□□□ 1.94
HM13-205ENST00000460225 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
HM13-205ENST00000460225 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
HM13-205ENST00000460225 BAZ1AQ9NRL2 1556 aaPredicted RBP26.44■■□□□ 1.82
HM13-205ENST00000460225 NCAPD3P42695 1498 aa26.41■■□□□ 1.82
HM13-205ENST00000460225 ATAD2BQ9ULI0 1458 aa26.4■■□□□ 1.82
HM13-205ENST00000460225 SMARCA2P51531 1590 aa26.39■■□□□ 1.82
HM13-205ENST00000460225 HMGXB3Q12766 1538 aa26.31■■□□□ 1.8
HM13-205ENST00000460225 MROH2BQ7Z745 1585 aa26.26■■□□□ 1.79
HM13-205ENST00000460225 PEG3Q9GZU2 1588 aa26.24■■□□□ 1.79
HM13-205ENST00000460225 BAZ1BQ9UIG0 1483 aaKnown RBP26.21■■□□□ 1.79
HM13-205ENST00000460225 WIZO95785 1651 aa26.01■■□□□ 1.75
HM13-205ENST00000460225 ERCC6Q03468 1493 aa25.92■■□□□ 1.74
HM13-205ENST00000460225 NESP48681 1621 aa25.92■■□□□ 1.74
HM13-205ENST00000460225 RSF1Q96T23 1441 aaPredicted RBP25.82■■□□□ 1.72
HM13-205ENST00000460225 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
HM13-205ENST00000460225 CUX2O14529 1486 aa25.72■■□□□ 1.71
HM13-205ENST00000460225 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
HM13-205ENST00000460225 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
HM13-205ENST00000460225 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
HM13-205ENST00000460225 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
HM13-205ENST00000460225 PDS5BQ9NTI5 1447 aa25.61■■□□□ 1.69
HM13-205ENST00000460225 CFTRP13569 1480 aa25.43■■□□□ 1.66
HM13-205ENST00000460225 MRC2Q9UBG0 1479 aa25.39■■□□□ 1.65
HM13-205ENST00000460225 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
HM13-205ENST00000460225 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
HM13-205ENST00000460225 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
HM13-205ENST00000460225 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
HM13-205ENST00000460225 WDR62O43379 1518 aa25.32■■□□□ 1.64
HM13-205ENST00000460225 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
HM13-205ENST00000460225 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.62
HM13-205ENST00000460225 SUPT5HO00267 1087 aaKnown RBP24.98■■□□□ 1.59
HM13-205ENST00000460225 TOPBP1Q92547 1522 aa24.94■■□□□ 1.58
HM13-205ENST00000460225 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
HM13-205ENST00000460225 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
HM13-205ENST00000460225 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
HM13-205ENST00000460225 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
HM13-205ENST00000460225 TARBP1Q13395 1621 aaKnown RBP24.72■■□□□ 1.55
HM13-205ENST00000460225 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
HM13-205ENST00000460225 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.55
HM13-205ENST00000460225 CUX1P39880 1505 aa24.66■■□□□ 1.54
HM13-205ENST00000460225 FGD5Q6ZNL6 1462 aa24.62■■□□□ 1.53
HM13-205ENST00000460225 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
HM13-205ENST00000460225 SOGA1O94964 1423 aa24.58■■□□□ 1.53
HM13-205ENST00000460225 AQRO60306 1485 aaKnown RBP eCLIP24.57■■□□□ 1.527e-8■■■□□ 18.6
HM13-205ENST00000460225 OSCARQ8IYS5 282 aa24.56■■□□□ 1.52
HM13-205ENST00000460225 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
HM13-205ENST00000460225 CHD1O14646 1710 aa24.49■■□□□ 1.51
HM13-205ENST00000460225 TDRD9Q8NDG6 1382 aaKnown RBP24.47■■□□□ 1.51
HM13-205ENST00000460225 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
HM13-205ENST00000460225 TOP2BQ02880 1626 aa24.39■■□□□ 1.49
HM13-205ENST00000460225 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
HM13-205ENST00000460225 PBRM1Q86U86 1689 aa24.37■■□□□ 1.49
HM13-205ENST00000460225 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
HM13-205ENST00000460225 SNAPC4Q5SXM2 1469 aa24.37■■□□□ 1.49
HM13-205ENST00000460225 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
HM13-205ENST00000460225 GRIN2BQ13224 1484 aa24.34■■□□□ 1.49
HM13-205ENST00000460225 FBLN2P98095 1184 aa24.33■■□□□ 1.49
HM13-205ENST00000460225 ABCA5Q8WWZ7 1642 aa24.32■■□□□ 1.48
HM13-205ENST00000460225 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
HM13-205ENST00000460225 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
HM13-205ENST00000460225 TRIM41Q8WV44 630 aa24.3■■□□□ 1.48
HM13-205ENST00000460225 RIMBP3CA6NJZ7 1639 aa24.29■■□□□ 1.48
HM13-205ENST00000460225 RIMBP3BA6NNM3 1639 aa24.29■■□□□ 1.48
HM13-205ENST00000460225 RIMBP3Q9UFD9 1639 aa24.29■■□□□ 1.48
HM13-205ENST00000460225 ARHGEF11O15085 1522 aa24.23■■□□□ 1.47
HM13-205ENST00000460225 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
HM13-205ENST00000460225 CHMP7Q8WUX9 453 aaPredicted RBP24.2■■□□□ 1.46
HM13-205ENST00000460225 CLASP1Q7Z460 1538 aa24.14■■□□□ 1.45
HM13-205ENST00000460225 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
HM13-205ENST00000460225 ERICH3Q5RHP9 1530 aa24.06■■□□□ 1.44
HM13-205ENST00000460225 GRIN2AQ12879 1464 aa24.03■■□□□ 1.44
HM13-205ENST00000460225 ARAP1Q96P48 1450 aa24.01■■□□□ 1.43
HM13-205ENST00000460225 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
HM13-205ENST00000460225 CYB5RLQ6IPT4 315 aa23.97■■□□□ 1.43
HM13-205ENST00000460225 CEP170Q5SW79 1584 aa23.95■■□□□ 1.43
HM13-205ENST00000460225 NUP160Q12769 1436 aa23.92■■□□□ 1.42
HM13-205ENST00000460225 KIF27Q86VH2 1401 aa23.88■■□□□ 1.41
HM13-205ENST00000460225 CUL7Q14999 1698 aa23.84■■□□□ 1.41
HM13-205ENST00000460225 SHROOM2Q13796 1616 aa23.82■■□□□ 1.4
HM13-205ENST00000460225 ERCC6L2Q5T890 1561 aa23.8■■□□□ 1.4
HM13-205ENST00000460225 IGF1RP08069 1367 aa23.78■■□□□ 1.4
HM13-205ENST00000460225 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
HM13-205ENST00000460225 CARMIL1Q5VZK9 1371 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms