RNA–Protein interactions for RNA: ENST00000417287.5

CAP1-209, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 5

Gene CAP1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-209ENST00000417287 NISCHQ9Y2I1 1504 aa31.13■■■□□ 2.57
CAP1-209ENST00000417287 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
CAP1-209ENST00000417287 ABCC9O60706 1549 aa26.79■■□□□ 1.88
CAP1-209ENST00000417287 ZCCHC6Q5VYS8 1495 aaKnown RBP25.95■■□□□ 1.74
CAP1-209ENST00000417287 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
CAP1-209ENST00000417287 NACADO15069 1562 aa25.86■■□□□ 1.73
CAP1-209ENST00000417287 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
CAP1-209ENST00000417287 MYO15BQ96JP2 1530 aa25.76■■□□□ 1.71
CAP1-209ENST00000417287 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
CAP1-209ENST00000417287 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
CAP1-209ENST00000417287 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
CAP1-209ENST00000417287 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
CAP1-209ENST00000417287 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.61
CAP1-209ENST00000417287 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
CAP1-209ENST00000417287 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
CAP1-209ENST00000417287 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
CAP1-209ENST00000417287 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
CAP1-209ENST00000417287 CECR2Q9BXF3 1484 aa24.25■■□□□ 1.47
CAP1-209ENST00000417287 SMARCA4P51532 1647 aa24.12■■□□□ 1.45
CAP1-209ENST00000417287 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
CAP1-209ENST00000417287 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
CAP1-209ENST00000417287 ATAD2BQ9ULI0 1458 aa23.91■■□□□ 1.42
CAP1-209ENST00000417287 SMARCA2P51531 1590 aa23.88■■□□□ 1.41
CAP1-209ENST00000417287 NCAPD3P42695 1498 aa23.86■■□□□ 1.41
CAP1-209ENST00000417287 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
CAP1-209ENST00000417287 RSF1Q96T23 1441 aaPredicted RBP23.8■■□□□ 1.4
CAP1-209ENST00000417287 WIZO95785 1651 aa23.79■■□□□ 1.4
CAP1-209ENST00000417287 HMGXB3Q12766 1538 aa23.75■■□□□ 1.39
CAP1-209ENST00000417287 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
CAP1-209ENST00000417287 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
CAP1-209ENST00000417287 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
CAP1-209ENST00000417287 NESP48681 1621 aa23.26■■□□□ 1.31
CAP1-209ENST00000417287 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
CAP1-209ENST00000417287 LAMC3Q9Y6N6 1575 aa23.2■■□□□ 1.3
CAP1-209ENST00000417287 CADPSQ9ULU8 1353 aa23.18■■□□□ 1.3
CAP1-209ENST00000417287 CFTRP13569 1480 aa23.08■■□□□ 1.29
CAP1-209ENST00000417287 ERCC6Q03468 1493 aa23.04■■□□□ 1.28
CAP1-209ENST00000417287 KIF21AQ7Z4S6 1674 aa23.03■■□□□ 1.28
CAP1-209ENST00000417287 PDS5BQ9NTI5 1447 aa23.02■■□□□ 1.28
CAP1-209ENST00000417287 PRDM2Q13029 1718 aa23■■□□□ 1.27
CAP1-209ENST00000417287 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
CAP1-209ENST00000417287 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
CAP1-209ENST00000417287 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
CAP1-209ENST00000417287 MRC2Q9UBG0 1479 aa22.78■■□□□ 1.24
CAP1-209ENST00000417287 CUX2O14529 1486 aa22.72■■□□□ 1.23
CAP1-209ENST00000417287 WDR62O43379 1518 aa22.7■■□□□ 1.22
CAP1-209ENST00000417287 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
CAP1-209ENST00000417287 TOPBP1Q92547 1522 aa22.58■■□□□ 1.21
CAP1-209ENST00000417287 DNMBPQ6XZF7 1577 aa22.58■■□□□ 1.2
CAP1-209ENST00000417287 ABCC8Q09428 1581 aa22.57■■□□□ 1.2
CAP1-209ENST00000417287 CUX1P39880 1505 aa22.5■■□□□ 1.19
CAP1-209ENST00000417287 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.182e-8■■■□□ 16.7
CAP1-209ENST00000417287 POLA1P09884 1462 aaPredicted RBP22.4■■□□□ 1.18
CAP1-209ENST00000417287 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
CAP1-209ENST00000417287 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
CAP1-209ENST00000417287 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
CAP1-209ENST00000417287 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
CAP1-209ENST00000417287 TOP2BQ02880 1626 aa22.37■■□□□ 1.17
CAP1-209ENST00000417287 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
CAP1-209ENST00000417287 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.16
CAP1-209ENST00000417287 SOGA1O94964 1423 aa22.31■■□□□ 1.16
CAP1-209ENST00000417287 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
CAP1-209ENST00000417287 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
CAP1-209ENST00000417287 EIF4G3O43432 1585 aaKnown RBP22.2■■□□□ 1.14
CAP1-209ENST00000417287 AQRO60306 1485 aaKnown RBP eCLIP22.18■■□□□ 1.141e-6■■■■□ 24.9
CAP1-209ENST00000417287 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
CAP1-209ENST00000417287 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
CAP1-209ENST00000417287 ABCA5Q8WWZ7 1642 aa22.08■■□□□ 1.13
CAP1-209ENST00000417287 GAPVD1Q14C86 1478 aa22.06■■□□□ 1.12
CAP1-209ENST00000417287 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
CAP1-209ENST00000417287 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
CAP1-209ENST00000417287 GRIN2BQ13224 1484 aa22.02■■□□□ 1.12
CAP1-209ENST00000417287 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
CAP1-209ENST00000417287 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
CAP1-209ENST00000417287 CHD1O14646 1710 aa21.93■■□□□ 1.1
CAP1-209ENST00000417287 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
CAP1-209ENST00000417287 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
CAP1-209ENST00000417287 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
CAP1-209ENST00000417287 FBLN2P98095 1184 aa21.87■■□□□ 1.09
CAP1-209ENST00000417287 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
CAP1-209ENST00000417287 SYNJ2O15056 1496 aa21.84■■□□□ 1.09
CAP1-209ENST00000417287 ADAMTS12P58397 1594 aa21.84■■□□□ 1.09
CAP1-209ENST00000417287 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
CAP1-209ENST00000417287 IGF1RP08069 1367 aa21.84■■□□□ 1.09
CAP1-209ENST00000417287 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
CAP1-209ENST00000417287 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
CAP1-209ENST00000417287 DNAJC5Q9H3Z4 198 aa21.8■■□□□ 1.08
CAP1-209ENST00000417287 CUL7Q14999 1698 aa21.76■■□□□ 1.07
CAP1-209ENST00000417287 GRIN2AQ12879 1464 aa21.74■■□□□ 1.07
CAP1-209ENST00000417287 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.06
CAP1-209ENST00000417287 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
CAP1-209ENST00000417287 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
CAP1-209ENST00000417287 EEA1Q15075 1411 aa21.63■■□□□ 1.05
CAP1-209ENST00000417287 NUP160Q12769 1436 aa21.63■■□□□ 1.05
CAP1-209ENST00000417287 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
CAP1-209ENST00000417287 CSRNP3Q8WYN3 585 aa21.62■■□□□ 1.05
CAP1-209ENST00000417287 RAPGEF2Q9Y4G8 1499 aa21.59■■□□□ 1.05
CAP1-209ENST00000417287 PRXQ9BXM0 1461 aa21.57■■□□□ 1.04
CAP1-209ENST00000417287 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
CAP1-209ENST00000417287 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms