RNA–Protein interactions for RNA: ENST00000599353.1

PLD3-220, Transcript of phospholipase D family member 3, humanhuman

TSL 3

Gene PLD3, Length 332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-220ENST00000599353 NISCHQ9Y2I1 1504 aa40.38■■■■■ 4.06
PLD3-220ENST00000599353 CCDC180Q9P1Z9 1646 aa35.82■■■■□ 3.32
PLD3-220ENST00000599353 ABCC9O60706 1549 aa35.06■■■■□ 3.2
PLD3-220ENST00000599353 DCAF8L2P0C7V8 631 aa33.8■■■■□ 3
PLD3-220ENST00000599353 RB1CC1Q8TDY2 1594 aa33.76■■■□□ 2.99
PLD3-220ENST00000599353 NACADO15069 1562 aa33.75■■■□□ 2.99
PLD3-220ENST00000599353 ZCCHC6Q5VYS8 1495 aaKnown RBP33.61■■■□□ 2.97
PLD3-220ENST00000599353 MYO15BQ96JP2 1530 aa33.59■■■□□ 2.97
PLD3-220ENST00000599353 DCAF1Q9Y4B6 1507 aa33.44■■■□□ 2.94
PLD3-220ENST00000599353 UNC13AQ9UPW8 1703 aa32.87■■■□□ 2.85
PLD3-220ENST00000599353 PABPN1Q86U42 306 aaKnown RBP eCLIP32.83■■■□□ 2.85
PLD3-220ENST00000599353 BICRAQ9NZM4 1560 aa32.7■■■□□ 2.83
PLD3-220ENST00000599353 SCRIBQ14160 1630 aa32.66■■■□□ 2.82
PLD3-220ENST00000599353 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
PLD3-220ENST00000599353 DNAJC5BQ9UF47 199 aa32.24■■■□□ 2.75
PLD3-220ENST00000599353 EIF4G1Q04637 1599 aaKnown RBP31.85■■■□□ 2.69
PLD3-220ENST00000599353 CC2D2AQ9P2K1 1620 aa31.7■■■□□ 2.66
PLD3-220ENST00000599353 CECR2Q9BXF3 1484 aa31.52■■■□□ 2.64
PLD3-220ENST00000599353 BAZ1AQ9NRL2 1556 aaPredicted RBP31.28■■■□□ 2.6
PLD3-220ENST00000599353 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
PLD3-220ENST00000599353 NCAPD3P42695 1498 aa31.19■■■□□ 2.58
PLD3-220ENST00000599353 ATAD2BQ9ULI0 1458 aa31.16■■■□□ 2.58
PLD3-220ENST00000599353 SMARCA2P51531 1590 aa31.12■■■□□ 2.57
PLD3-220ENST00000599353 MROH2BQ7Z745 1585 aa31.09■■■□□ 2.57
PLD3-220ENST00000599353 PEG3Q9GZU2 1588 aa31■■■□□ 2.55
PLD3-220ENST00000599353 HMGXB3Q12766 1538 aa30.95■■■□□ 2.55
PLD3-220ENST00000599353 BAZ1BQ9UIG0 1483 aaKnown RBP30.89■■■□□ 2.53
PLD3-220ENST00000599353 RSF1Q96T23 1441 aaPredicted RBP30.8■■■□□ 2.52
PLD3-220ENST00000599353 WIZO95785 1651 aa30.71■■■□□ 2.51
PLD3-220ENST00000599353 TOP2AP11388 1531 aaKnown RBP30.42■■■□□ 2.46
PLD3-220ENST00000599353 NESP48681 1621 aa30.33■■■□□ 2.45
PLD3-220ENST00000599353 LAMC3Q9Y6N6 1575 aa30.29■■■□□ 2.44
PLD3-220ENST00000599353 CADPSQ9ULU8 1353 aa30.28■■■□□ 2.44
PLD3-220ENST00000599353 ERCC6Q03468 1493 aa30.23■■■□□ 2.43
PLD3-220ENST00000599353 PDS5BQ9NTI5 1447 aa30.15■■■□□ 2.42
PLD3-220ENST00000599353 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
PLD3-220ENST00000599353 CFTRP13569 1480 aa30.08■■■□□ 2.41
PLD3-220ENST00000599353 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
PLD3-220ENST00000599353 CUX2O14529 1486 aa29.93■■■□□ 2.38
PLD3-220ENST00000599353 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
PLD3-220ENST00000599353 FANCD2Q9BXW9 1451 aa29.87■■■□□ 2.37
PLD3-220ENST00000599353 THOC2Q8NI27 1593 aaKnown RBP29.82■■■□□ 2.36
PLD3-220ENST00000599353 CEP164Q9UPV0 1460 aa29.82■■■□□ 2.36
PLD3-220ENST00000599353 MRC2Q9UBG0 1479 aa29.78■■■□□ 2.36
PLD3-220ENST00000599353 PRDM2Q13029 1718 aa29.7■■■□□ 2.34
PLD3-220ENST00000599353 WDR62O43379 1518 aa29.66■■■□□ 2.34
PLD3-220ENST00000599353 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
PLD3-220ENST00000599353 ABCC8Q09428 1581 aa29.47■■■□□ 2.31
PLD3-220ENST00000599353 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
PLD3-220ENST00000599353 DNMBPQ6XZF7 1577 aa29.34■■■□□ 2.29
PLD3-220ENST00000599353 IFT140Q96RY7 1462 aa29.23■■■□□ 2.27
PLD3-220ENST00000599353 CUX1P39880 1505 aa29.16■■■□□ 2.26
PLD3-220ENST00000599353 POLA1P09884 1462 aaPredicted RBP29.14■■■□□ 2.26
PLD3-220ENST00000599353 SOGA1O94964 1423 aa29.09■■■□□ 2.25
PLD3-220ENST00000599353 DNAJC5Q9H3Z4 198 aa29.08■■■□□ 2.25
PLD3-220ENST00000599353 FGD5Q6ZNL6 1462 aa29.06■■■□□ 2.24
PLD3-220ENST00000599353 ZNF608Q9ULD9 1512 aaPredicted RBP29.05■■■□□ 2.24
PLD3-220ENST00000599353 TARBP1Q13395 1621 aaKnown RBP29.04■■■□□ 2.24
PLD3-220ENST00000599353 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
PLD3-220ENST00000599353 RAD54L2Q9Y4B4 1467 aa29.02■■■□□ 2.24
PLD3-220ENST00000599353 AQRO60306 1485 aaKnown RBP eCLIP28.93■■■□□ 2.222e-6■□□□□ 10.6
PLD3-220ENST00000599353 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
PLD3-220ENST00000599353 TDRD9Q8NDG6 1382 aaKnown RBP28.9■■■□□ 2.22
PLD3-220ENST00000599353 BIVM-ERCC5R4GMW8 1640 aa28.89■■■□□ 2.22
PLD3-220ENST00000599353 EIF4G3O43432 1585 aaKnown RBP28.88■■■□□ 2.21
PLD3-220ENST00000599353 SYNJ1O43426 1573 aa28.87■■■□□ 2.21
PLD3-220ENST00000599353 WDR97A6NE52 1622 aa28.84■■■□□ 2.21
PLD3-220ENST00000599353 ABCA10Q8WWZ4 1543 aa28.82■■■□□ 2.2
PLD3-220ENST00000599353 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
PLD3-220ENST00000599353 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
PLD3-220ENST00000599353 GAPVD1Q14C86 1478 aa28.72■■■□□ 2.19
PLD3-220ENST00000599353 MAGI1Q96QZ7 1491 aaPredicted RBP28.63■■■□□ 2.17
PLD3-220ENST00000599353 ABCA5Q8WWZ7 1642 aa28.62■■■□□ 2.17
PLD3-220ENST00000599353 SNAPC4Q5SXM2 1469 aa28.62■■■□□ 2.17
PLD3-220ENST00000599353 FBLN2P98095 1184 aa28.61■■■□□ 2.17
PLD3-220ENST00000599353 CHMP7Q8WUX9 453 aaPredicted RBP28.58■■■□□ 2.17
PLD3-220ENST00000599353 PBRM1Q86U86 1689 aa28.53■■■□□ 2.16
PLD3-220ENST00000599353 SYNJ2O15056 1496 aa28.52■■■□□ 2.16
PLD3-220ENST00000599353 CHD1O14646 1710 aa28.49■■■□□ 2.15
PLD3-220ENST00000599353 ERICH3Q5RHP9 1530 aa28.47■■■□□ 2.15
PLD3-220ENST00000599353 KIF27Q86VH2 1401 aa28.44■■■□□ 2.14
PLD3-220ENST00000599353 TRIM41Q8WV44 630 aa28.42■■■□□ 2.14
PLD3-220ENST00000599353 FHAD1B1AJZ9 1412 aa28.41■■■□□ 2.14
PLD3-220ENST00000599353 IGF1RP08069 1367 aa28.37■■■□□ 2.13
PLD3-220ENST00000599353 ADAMTS12P58397 1594 aa28.34■■■□□ 2.13
PLD3-220ENST00000599353 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
PLD3-220ENST00000599353 CLASP1Q7Z460 1538 aa28.25■■■□□ 2.11
PLD3-220ENST00000599353 NUP160Q12769 1436 aa28.22■■■□□ 2.11
PLD3-220ENST00000599353 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
PLD3-220ENST00000599353 CARMIL1Q5VZK9 1371 aa28.18■■■□□ 2.1
PLD3-220ENST00000599353 RIMBP3CA6NJZ7 1639 aa28.17■■■□□ 2.1
PLD3-220ENST00000599353 RIMBP3BA6NNM3 1639 aa28.17■■■□□ 2.1
PLD3-220ENST00000599353 RIMBP3Q9UFD9 1639 aa28.17■■■□□ 2.1
PLD3-220ENST00000599353 CUL7Q14999 1698 aa28.16■■■□□ 2.1
PLD3-220ENST00000599353 RUSC2Q8N2Y8 1516 aa28.14■■■□□ 2.1
PLD3-220ENST00000599353 CEP170Q5SW79 1584 aa28.12■■■□□ 2.09
PLD3-220ENST00000599353 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
PLD3-220ENST00000599353 CYB5RLQ6IPT4 315 aa28.03■■■□□ 2.08
PLD3-220ENST00000599353 JPH4Q96JJ6 628 aa28.02■■■□□ 2.08
PLD3-220ENST00000599353 RAPGEF2Q9Y4G8 1499 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms