RNA–Protein interactions for RNA: ENST00000427843.5

CAP1-213, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 5

Gene CAP1, Length 739 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-213ENST00000427843 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
CAP1-213ENST00000427843 CCDC180Q9P1Z9 1646 aa21.97■■□□□ 1.11
CAP1-213ENST00000427843 ABCC9O60706 1549 aa21.27■■□□□ 1
CAP1-213ENST00000427843 ZCCHC6Q5VYS8 1495 aaKnown RBP20.64■□□□□ 0.89
CAP1-213ENST00000427843 NACADO15069 1562 aa20.63■□□□□ 0.89
CAP1-213ENST00000427843 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
CAP1-213ENST00000427843 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
CAP1-213ENST00000427843 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
CAP1-213ENST00000427843 DCAF8L2P0C7V8 631 aa20.39■□□□□ 0.85
CAP1-213ENST00000427843 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
CAP1-213ENST00000427843 BICRAQ9NZM4 1560 aa19.98■□□□□ 0.79
CAP1-213ENST00000427843 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
CAP1-213ENST00000427843 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
CAP1-213ENST00000427843 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
CAP1-213ENST00000427843 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
CAP1-213ENST00000427843 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
CAP1-213ENST00000427843 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
CAP1-213ENST00000427843 CECR2Q9BXF3 1484 aa19.21■□□□□ 0.67
CAP1-213ENST00000427843 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
CAP1-213ENST00000427843 SMARCA4P51532 1647 aa19.14■□□□□ 0.66
CAP1-213ENST00000427843 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
CAP1-213ENST00000427843 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
CAP1-213ENST00000427843 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
CAP1-213ENST00000427843 SMARCA2P51531 1590 aa19.02■□□□□ 0.64
CAP1-213ENST00000427843 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
CAP1-213ENST00000427843 HMGXB3Q12766 1538 aa18.96■□□□□ 0.63
CAP1-213ENST00000427843 RSF1Q96T23 1441 aaPredicted RBP18.86■□□□□ 0.61
CAP1-213ENST00000427843 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
CAP1-213ENST00000427843 WIZO95785 1651 aa18.79■□□□□ 0.6
CAP1-213ENST00000427843 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
CAP1-213ENST00000427843 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
CAP1-213ENST00000427843 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
CAP1-213ENST00000427843 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
CAP1-213ENST00000427843 NESP48681 1621 aa18.45■□□□□ 0.54
CAP1-213ENST00000427843 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
CAP1-213ENST00000427843 CFTRP13569 1480 aa18.39■□□□□ 0.54
CAP1-213ENST00000427843 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
CAP1-213ENST00000427843 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
CAP1-213ENST00000427843 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
CAP1-213ENST00000427843 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
CAP1-213ENST00000427843 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
CAP1-213ENST00000427843 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
CAP1-213ENST00000427843 FANCD2Q9BXW9 1451 aa18.21■□□□□ 0.51
CAP1-213ENST00000427843 CUX2O14529 1486 aa18.2■□□□□ 0.5
CAP1-213ENST00000427843 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
CAP1-213ENST00000427843 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
CAP1-213ENST00000427843 WDR62O43379 1518 aa18.13■□□□□ 0.49
CAP1-213ENST00000427843 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
CAP1-213ENST00000427843 ABCC8Q09428 1581 aa18■□□□□ 0.47
CAP1-213ENST00000427843 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
CAP1-213ENST00000427843 DNMBPQ6XZF7 1577 aa17.95■□□□□ 0.46
CAP1-213ENST00000427843 CUX1P39880 1505 aa17.84■□□□□ 0.45
CAP1-213ENST00000427843 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
CAP1-213ENST00000427843 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
CAP1-213ENST00000427843 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
CAP1-213ENST00000427843 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.432e-8■■■□□ 16.7
CAP1-213ENST00000427843 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
CAP1-213ENST00000427843 TOP2BQ02880 1626 aa17.73■□□□□ 0.43
CAP1-213ENST00000427843 BIVM-ERCC5R4GMW8 1640 aa17.73■□□□□ 0.43
CAP1-213ENST00000427843 SOGA1O94964 1423 aa17.71■□□□□ 0.43
CAP1-213ENST00000427843 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
CAP1-213ENST00000427843 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
CAP1-213ENST00000427843 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
CAP1-213ENST00000427843 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
CAP1-213ENST00000427843 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
CAP1-213ENST00000427843 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
CAP1-213ENST00000427843 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■■■■□ 24.9
CAP1-213ENST00000427843 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
CAP1-213ENST00000427843 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
CAP1-213ENST00000427843 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
CAP1-213ENST00000427843 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
CAP1-213ENST00000427843 MAGI1Q96QZ7 1491 aaPredicted RBP17.49■□□□□ 0.39
CAP1-213ENST00000427843 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
CAP1-213ENST00000427843 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
CAP1-213ENST00000427843 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
CAP1-213ENST00000427843 SYNJ2O15056 1496 aa17.4■□□□□ 0.38
CAP1-213ENST00000427843 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
CAP1-213ENST00000427843 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
CAP1-213ENST00000427843 CHD1O14646 1710 aa17.37■□□□□ 0.37
CAP1-213ENST00000427843 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
CAP1-213ENST00000427843 FHAD1B1AJZ9 1412 aa17.34■□□□□ 0.37
CAP1-213ENST00000427843 IGF1RP08069 1367 aa17.32■□□□□ 0.36
CAP1-213ENST00000427843 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
CAP1-213ENST00000427843 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
CAP1-213ENST00000427843 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
CAP1-213ENST00000427843 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
CAP1-213ENST00000427843 CUL7Q14999 1698 aa17.26■□□□□ 0.35
CAP1-213ENST00000427843 FBLN2P98095 1184 aa17.26■□□□□ 0.35
CAP1-213ENST00000427843 NUP160Q12769 1436 aa17.25■□□□□ 0.35
CAP1-213ENST00000427843 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
CAP1-213ENST00000427843 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.34
CAP1-213ENST00000427843 CARMIL1Q5VZK9 1371 aa17.19■□□□□ 0.34
CAP1-213ENST00000427843 CEP170Q5SW79 1584 aa17.18■□□□□ 0.34
CAP1-213ENST00000427843 EEA1Q15075 1411 aa17.16■□□□□ 0.34
CAP1-213ENST00000427843 ARHGEF11O15085 1522 aa17.13■□□□□ 0.33
CAP1-213ENST00000427843 PRXQ9BXM0 1461 aa17.12■□□□□ 0.33
CAP1-213ENST00000427843 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
CAP1-213ENST00000427843 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
CAP1-213ENST00000427843 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
CAP1-213ENST00000427843 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms