RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
COL9A2-207ENST00000482722 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
COL9A2-207ENST00000482722 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
COL9A2-207ENST00000482722 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
COL9A2-207ENST00000482722 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
COL9A2-207ENST00000482722 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
COL9A2-207ENST00000482722 HRCP23327 699 aa24.02■■□□□ 1.44
COL9A2-207ENST00000482722 ABCC9O60706 1549 aa23.93■■□□□ 1.42
COL9A2-207ENST00000482722 DCAF1Q9Y4B6 1507 aa23.7■■□□□ 1.38
COL9A2-207ENST00000482722 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.38
COL9A2-207ENST00000482722 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.36
COL9A2-207ENST00000482722 PCGF6Q9BYE7 350 aa23.58■■□□□ 1.36
COL9A2-207ENST00000482722 SCRIBQ14160 1630 aa23.56■■□□□ 1.36
COL9A2-207ENST00000482722 PPARGC1BQ86YN6 1023 aaKnown RBP23.55■■□□□ 1.36
COL9A2-207ENST00000482722 NACADO15069 1562 aa23.16■■□□□ 1.3
COL9A2-207ENST00000482722 LOC105371045A0A1W2PR82 267 aa23.13■■□□□ 1.29
COL9A2-207ENST00000482722 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
COL9A2-207ENST00000482722 RSF1Q96T23 1441 aaPredicted RBP23.01■■□□□ 1.27
COL9A2-207ENST00000482722 PELP1Q8IZL8 1130 aaKnown RBP22.99■■□□□ 1.27
COL9A2-207ENST00000482722 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.271e-7■■■■□ 23.6
COL9A2-207ENST00000482722 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
COL9A2-207ENST00000482722 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
COL9A2-207ENST00000482722 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
COL9A2-207ENST00000482722 EHMT2Q96KQ7 1210 aa22.71■■□□□ 1.23
COL9A2-207ENST00000482722 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
COL9A2-207ENST00000482722 UNC13AQ9UPW8 1703 aa22.69■■□□□ 1.22
COL9A2-207ENST00000482722 WIZO95785 1651 aa22.66■■□□□ 1.22
COL9A2-207ENST00000482722 FAM9AQ8IZU1 332 aaPredicted RBP22.64■■□□□ 1.21
COL9A2-207ENST00000482722 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
COL9A2-207ENST00000482722 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
COL9A2-207ENST00000482722 BICRAQ9NZM4 1560 aa22.43■■□□□ 1.18
COL9A2-207ENST00000482722 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
COL9A2-207ENST00000482722 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
COL9A2-207ENST00000482722 CCDC88BA6NC98 1476 aa22.18■■□□□ 1.14
COL9A2-207ENST00000482722 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.14
COL9A2-207ENST00000482722 TOP2AP11388 1531 aaKnown RBP22.1■■□□□ 1.13
COL9A2-207ENST00000482722 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
COL9A2-207ENST00000482722 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
COL9A2-207ENST00000482722 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
COL9A2-207ENST00000482722 MYT1Q01538 1121 aa22.05■■□□□ 1.12
COL9A2-207ENST00000482722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.99■■□□□ 1.11
COL9A2-207ENST00000482722 GTF3C3Q9Y5Q9 886 aa21.97■■□□□ 1.11
COL9A2-207ENST00000482722 TTBK1Q5TCY1 1321 aaPredicted RBP21.96■■□□□ 1.11
COL9A2-207ENST00000482722 ATAD2BQ9ULI0 1458 aa21.94■■□□□ 1.1
COL9A2-207ENST00000482722 EIF4G1Q04637 1599 aaKnown RBP21.89■■□□□ 1.09
COL9A2-207ENST00000482722 CCER1Q8TC90 406 aaPredicted RBP21.89■■□□□ 1.09
COL9A2-207ENST00000482722 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
COL9A2-207ENST00000482722 CENPBP07199 599 aaPredicted RBP21.85■■□□□ 1.09
COL9A2-207ENST00000482722 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
COL9A2-207ENST00000482722 SOGA1O94964 1423 aa21.78■■□□□ 1.08
COL9A2-207ENST00000482722 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
COL9A2-207ENST00000482722 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
COL9A2-207ENST00000482722 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
COL9A2-207ENST00000482722 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
COL9A2-207ENST00000482722 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
COL9A2-207ENST00000482722 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
COL9A2-207ENST00000482722 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
COL9A2-207ENST00000482722 CEP162Q5TB80 1403 aa21.53■■□□□ 1.04
COL9A2-207ENST00000482722 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
COL9A2-207ENST00000482722 YTHDC1Q96MU7 727 aaKnown RBP21.45■■□□□ 1.02
COL9A2-207ENST00000482722 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
COL9A2-207ENST00000482722 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
COL9A2-207ENST00000482722 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
COL9A2-207ENST00000482722 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
COL9A2-207ENST00000482722 HMGXB3Q12766 1538 aa21.36■■□□□ 1.01
COL9A2-207ENST00000482722 EEA1Q15075 1411 aa21.32■■□□□ 1
COL9A2-207ENST00000482722 GOLGA3Q08378 1498 aa21.29■■□□□ 1
COL9A2-207ENST00000482722 MIER1Q8N108 512 aa21.27■■□□□ 1
COL9A2-207ENST00000482722 CFTRP13569 1480 aa21.23■□□□□ 0.99
COL9A2-207ENST00000482722 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
COL9A2-207ENST00000482722 CUX1P39880 1505 aa21.22■□□□□ 0.99
COL9A2-207ENST00000482722 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
COL9A2-207ENST00000482722 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
COL9A2-207ENST00000482722 CADPSQ9ULU8 1353 aa21.17■□□□□ 0.98
COL9A2-207ENST00000482722 NESP48681 1621 aa21.17■□□□□ 0.98
COL9A2-207ENST00000482722 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
COL9A2-207ENST00000482722 CLIP1P30622 1438 aa21.12■□□□□ 0.97
COL9A2-207ENST00000482722 APLP2Q06481 763 aa21.1■□□□□ 0.97
COL9A2-207ENST00000482722 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
COL9A2-207ENST00000482722 KIF21BO75037 1637 aa21.01■□□□□ 0.95
COL9A2-207ENST00000482722 FANCD2Q9BXW9 1451 aa20.98■□□□□ 0.95
COL9A2-207ENST00000482722 CUX2O14529 1486 aa20.97■□□□□ 0.95
COL9A2-207ENST00000482722 VPS8Q8N3P4 1428 aa20.97■□□□□ 0.95
COL9A2-207ENST00000482722 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
COL9A2-207ENST00000482722 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
COL9A2-207ENST00000482722 SUPT16HQ9Y5B9 1047 aaKnown RBP20.93■□□□□ 0.94
COL9A2-207ENST00000482722 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
COL9A2-207ENST00000482722 PRXQ9BXM0 1461 aa20.89■□□□□ 0.94
COL9A2-207ENST00000482722 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
COL9A2-207ENST00000482722 IGF1RP08069 1367 aa20.87■□□□□ 0.93
COL9A2-207ENST00000482722 CLSPNQ9HAW4 1339 aa20.85■□□□□ 0.93
COL9A2-207ENST00000482722 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
COL9A2-207ENST00000482722 TSHZ2Q9NRE2 1034 aa20.83■□□□□ 0.92
COL9A2-207ENST00000482722 ANP32EQ9BTT0 268 aa20.81■□□□□ 0.92
COL9A2-207ENST00000482722 KANK4Q5T7N3 995 aaPredicted RBP20.79■□□□□ 0.92
COL9A2-207ENST00000482722 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
COL9A2-207ENST00000482722 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
COL9A2-207ENST00000482722 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
COL9A2-207ENST00000482722 ATP1B4Q9UN42 357 aaPredicted RBP20.75■□□□□ 0.91
COL9A2-207ENST00000482722 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms