RNA–Protein interactions for RNA: ENST00000424977.1

CAP1-212, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 5

Gene CAP1, Length 702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-212ENST00000424977 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
CAP1-212ENST00000424977 ABCC9O60706 1549 aa18.93■□□□□ 0.62
CAP1-212ENST00000424977 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
CAP1-212ENST00000424977 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
CAP1-212ENST00000424977 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
CAP1-212ENST00000424977 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
CAP1-212ENST00000424977 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
CAP1-212ENST00000424977 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
CAP1-212ENST00000424977 NACADO15069 1562 aa17.15■□□□□ 0.34
CAP1-212ENST00000424977 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
CAP1-212ENST00000424977 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
CAP1-212ENST00000424977 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
CAP1-212ENST00000424977 CUX2O14529 1486 aa17.03■□□□□ 0.32
CAP1-212ENST00000424977 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
CAP1-212ENST00000424977 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
CAP1-212ENST00000424977 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
CAP1-212ENST00000424977 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
CAP1-212ENST00000424977 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
CAP1-212ENST00000424977 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
CAP1-212ENST00000424977 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
CAP1-212ENST00000424977 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
CAP1-212ENST00000424977 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
CAP1-212ENST00000424977 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
CAP1-212ENST00000424977 ILDR1Q86SU0 546 aaPredicted RBP15.89■□□□□ 0.13
CAP1-212ENST00000424977 NESP48681 1621 aa15.89■□□□□ 0.13
CAP1-212ENST00000424977 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
CAP1-212ENST00000424977 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
CAP1-212ENST00000424977 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
CAP1-212ENST00000424977 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
CAP1-212ENST00000424977 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
CAP1-212ENST00000424977 NCAPD3P42695 1498 aa15.85■□□□□ 0.13
CAP1-212ENST00000424977 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
CAP1-212ENST00000424977 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
CAP1-212ENST00000424977 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
CAP1-212ENST00000424977 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
CAP1-212ENST00000424977 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
CAP1-212ENST00000424977 HMGXB3Q12766 1538 aa15.65■□□□□ 0.1
CAP1-212ENST00000424977 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
CAP1-212ENST00000424977 WDR62O43379 1518 aa15.62■□□□□ 0.09
CAP1-212ENST00000424977 PDS5BQ9NTI5 1447 aa15.61■□□□□ 0.09
CAP1-212ENST00000424977 ATAD2BQ9ULI0 1458 aa15.58■□□□□ 0.08
CAP1-212ENST00000424977 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
CAP1-212ENST00000424977 CYB5RLQ6IPT4 315 aa15.51■□□□□ 0.07
CAP1-212ENST00000424977 ARAP1Q96P48 1450 aa15.46■□□□□ 0.07
CAP1-212ENST00000424977 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
CAP1-212ENST00000424977 RSF1Q96T23 1441 aaPredicted RBP15.27■□□□□ 0.04
CAP1-212ENST00000424977 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
CAP1-212ENST00000424977 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
CAP1-212ENST00000424977 SMARCA4P51532 1647 aa15.22■□□□□ 0.03
CAP1-212ENST00000424977 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
CAP1-212ENST00000424977 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
CAP1-212ENST00000424977 LMTK3Q96Q04 1460 aa15.07■□□□□ 0
CAP1-212ENST00000424977 FANCD2Q9BXW9 1451 aa15.07■□□□□ 0
CAP1-212ENST00000424977 FBXO41Q8TF61 875 aa15.06■□□□□ 0
CAP1-212ENST00000424977 KDM4FA0A1W2PPD8 638 aa15.05■□□□□ -0
CAP1-212ENST00000424977 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
CAP1-212ENST00000424977 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
CAP1-212ENST00000424977 SOCS7O14512 581 aa15.02■□□□□ -0
CAP1-212ENST00000424977 CHD1O14646 1710 aa15.01□□□□□ -0.01
CAP1-212ENST00000424977 IFT140Q96RY7 1462 aa15□□□□□ -0.01
CAP1-212ENST00000424977 EIF4G3O43432 1585 aaKnown RBP14.94□□□□□ -0.02
CAP1-212ENST00000424977 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
CAP1-212ENST00000424977 HECW2Q9P2P5 1572 aa14.91□□□□□ -0.02
CAP1-212ENST00000424977 CFTRP13569 1480 aa14.84□□□□□ -0.03
CAP1-212ENST00000424977 GAPVD1Q14C86 1478 aa14.8□□□□□ -0.04
CAP1-212ENST00000424977 KIF13AQ9H1H9 1805 aa14.79□□□□□ -0.04
CAP1-212ENST00000424977 ILDR2Q71H61 639 aa14.78□□□□□ -0.04
CAP1-212ENST00000424977 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
CAP1-212ENST00000424977 FBLN2P98095 1184 aa14.72□□□□□ -0.05
CAP1-212ENST00000424977 SYNJ2O15056 1496 aa14.69□□□□□ -0.06
CAP1-212ENST00000424977 MROH2BQ7Z745 1585 aa14.69□□□□□ -0.06
CAP1-212ENST00000424977 KDM6BO15054 1643 aa14.69□□□□□ -0.06
CAP1-212ENST00000424977 AQRO60306 1485 aaKnown RBP eCLIP14.68□□□□□ -0.061e-6■■■■□ 24.9
CAP1-212ENST00000424977 ADGRL1O94910 1474 aa14.68□□□□□ -0.06
CAP1-212ENST00000424977 TARBP1Q13395 1621 aaKnown RBP14.64□□□□□ -0.07
CAP1-212ENST00000424977 TOPBP1Q92547 1522 aa14.64□□□□□ -0.07
CAP1-212ENST00000424977 DISP3Q9P2K9 1392 aa14.63□□□□□ -0.07
CAP1-212ENST00000424977 ABCC10Q5T3U5 1492 aa14.57□□□□□ -0.08
CAP1-212ENST00000424977 ABCC8Q09428 1581 aa14.57□□□□□ -0.08
CAP1-212ENST00000424977 PRDM2Q13029 1718 aa14.56□□□□□ -0.08
CAP1-212ENST00000424977 SNAPC4Q5SXM2 1469 aa14.56□□□□□ -0.08
CAP1-212ENST00000424977 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
CAP1-212ENST00000424977 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
CAP1-212ENST00000424977 DIP2BQ9P265 1576 aa14.51□□□□□ -0.09
CAP1-212ENST00000424977 DNMBPQ6XZF7 1577 aa14.5□□□□□ -0.09
CAP1-212ENST00000424977 SPATA31D1Q6ZQQ2 1576 aa14.48□□□□□ -0.09
CAP1-212ENST00000424977 CHMP7Q8WUX9 453 aaPredicted RBP14.48□□□□□ -0.09
CAP1-212ENST00000424977 FAM69CQ0P6D2 419 aa14.47□□□□□ -0.09
CAP1-212ENST00000424977 MAPKBP1O60336 1514 aa14.46□□□□□ -0.09
CAP1-212ENST00000424977 POLA1P09884 1462 aaPredicted RBP14.42□□□□□ -0.1
CAP1-212ENST00000424977 WIZO95785 1651 aa14.41□□□□□ -0.1
CAP1-212ENST00000424977 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
CAP1-212ENST00000424977 CEP170Q5SW79 1584 aa14.36□□□□□ -0.11
CAP1-212ENST00000424977 GRIN2BQ13224 1484 aa14.36□□□□□ -0.11
CAP1-212ENST00000424977 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
CAP1-212ENST00000424977 SHROOM2Q13796 1616 aa14.32□□□□□ -0.12
CAP1-212ENST00000424977 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
CAP1-212ENST00000424977 TSPOAP1O95153 1857 aa14.27□□□□□ -0.13
CAP1-212ENST00000424977 SOGA1O94964 1423 aa14.26□□□□□ -0.13
CAP1-212ENST00000424977 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms