RNA–Protein interactions for RNA: ENST00000531140.1

SC5D-207, Transcript of sterol-C5-desaturase, humanhuman

TSL 1 (best)

Gene SC5D, Length 767 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-207ENST00000531140 NISCHQ9Y2I1 1504 aa37.75■■■■□ 3.63
SC5D-207ENST00000531140 ABCC9O60706 1549 aa33.88■■■■□ 3.01
SC5D-207ENST00000531140 CCDC180Q9P1Z9 1646 aa33.79■■■■□ 3
SC5D-207ENST00000531140 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.75
SC5D-207ENST00000531140 NACADO15069 1562 aa32.06■■■□□ 2.72
SC5D-207ENST00000531140 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
SC5D-207ENST00000531140 DNAJC5BQ9UF47 199 aa31.82■■■□□ 2.68
SC5D-207ENST00000531140 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
SC5D-207ENST00000531140 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
SC5D-207ENST00000531140 AEBP2Q6ZN18 517 aaPredicted RBP31.55■■■□□ 2.64
SC5D-207ENST00000531140 ZCCHC6Q5VYS8 1495 aaKnown RBP31.49■■■□□ 2.63
SC5D-207ENST00000531140 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.61
SC5D-207ENST00000531140 UNC13AQ9UPW8 1703 aa31.32■■■□□ 2.6
SC5D-207ENST00000531140 BICRAQ9NZM4 1560 aa31.22■■■□□ 2.59
SC5D-207ENST00000531140 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
SC5D-207ENST00000531140 CHIC1Q5VXU3 224 aa30.81■■■□□ 2.52
SC5D-207ENST00000531140 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
SC5D-207ENST00000531140 CC2D2AQ9P2K1 1620 aa30.56■■■□□ 2.48
SC5D-207ENST00000531140 CECR2Q9BXF3 1484 aa30.56■■■□□ 2.48
SC5D-207ENST00000531140 EIF4G1Q04637 1599 aaKnown RBP30.5■■■□□ 2.47
SC5D-207ENST00000531140 NCAPD3P42695 1498 aa29.62■■■□□ 2.33
SC5D-207ENST00000531140 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
SC5D-207ENST00000531140 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
SC5D-207ENST00000531140 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
SC5D-207ENST00000531140 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
SC5D-207ENST00000531140 ERCC6Q03468 1493 aa29.33■■■□□ 2.29
SC5D-207ENST00000531140 HMGXB3Q12766 1538 aa29.33■■■□□ 2.29
SC5D-207ENST00000531140 BAZ1AQ9NRL2 1556 aaPredicted RBP29.3■■■□□ 2.28
SC5D-207ENST00000531140 CUX2O14529 1486 aa29.26■■■□□ 2.27
SC5D-207ENST00000531140 BAZ1BQ9UIG0 1483 aaKnown RBP29.22■■■□□ 2.27
SC5D-207ENST00000531140 PEG3Q9GZU2 1588 aa29.12■■■□□ 2.25
SC5D-207ENST00000531140 NESP48681 1621 aa29.06■■■□□ 2.24
SC5D-207ENST00000531140 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
SC5D-207ENST00000531140 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
SC5D-207ENST00000531140 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
SC5D-207ENST00000531140 RSF1Q96T23 1441 aaPredicted RBP28.77■■■□□ 2.2
SC5D-207ENST00000531140 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
SC5D-207ENST00000531140 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
SC5D-207ENST00000531140 WIZO95785 1651 aa28.64■■■□□ 2.18
SC5D-207ENST00000531140 KIF21AQ7Z4S6 1674 aa28.6■■■□□ 2.17
SC5D-207ENST00000531140 MRC2Q9UBG0 1479 aa28.51■■■□□ 2.15
SC5D-207ENST00000531140 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
SC5D-207ENST00000531140 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
SC5D-207ENST00000531140 WDR62O43379 1518 aa28.38■■■□□ 2.13
SC5D-207ENST00000531140 CFTRP13569 1480 aa28.37■■■□□ 2.13
SC5D-207ENST00000531140 FANCD2Q9BXW9 1451 aa28.37■■■□□ 2.13
SC5D-207ENST00000531140 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
SC5D-207ENST00000531140 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
SC5D-207ENST00000531140 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
SC5D-207ENST00000531140 OSCARQ8IYS5 282 aa28.05■■■□□ 2.08
SC5D-207ENST00000531140 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
SC5D-207ENST00000531140 PRDM2Q13029 1718 aa27.91■■■□□ 2.06
SC5D-207ENST00000531140 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
SC5D-207ENST00000531140 ABCC8Q09428 1581 aa27.86■■■□□ 2.05
SC5D-207ENST00000531140 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
SC5D-207ENST00000531140 ZNF608Q9ULD9 1512 aaPredicted RBP27.74■■■□□ 2.03
SC5D-207ENST00000531140 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
SC5D-207ENST00000531140 AQRO60306 1485 aaKnown RBP eCLIP27.55■■■□□ 2
SC5D-207ENST00000531140 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
SC5D-207ENST00000531140 POLA1P09884 1462 aaPredicted RBP27.51■■■□□ 2
SC5D-207ENST00000531140 TARBP1Q13395 1621 aaKnown RBP27.49■■□□□ 1.99
SC5D-207ENST00000531140 FBLN2P98095 1184 aa27.49■■□□□ 1.99
SC5D-207ENST00000531140 SOGA1O94964 1423 aa27.49■■□□□ 1.99
SC5D-207ENST00000531140 RIMBP3CA6NJZ7 1639 aa27.45■■□□□ 1.99
SC5D-207ENST00000531140 RIMBP3BA6NNM3 1639 aa27.45■■□□□ 1.99
SC5D-207ENST00000531140 RIMBP3Q9UFD9 1639 aa27.45■■□□□ 1.99
SC5D-207ENST00000531140 RAD54L2Q9Y4B4 1467 aa27.42■■□□□ 1.98
SC5D-207ENST00000531140 TDRD9Q8NDG6 1382 aaKnown RBP27.41■■□□□ 1.98
SC5D-207ENST00000531140 ARHGEF11O15085 1522 aa27.41■■□□□ 1.98
SC5D-207ENST00000531140 CYB5RLQ6IPT4 315 aa27.36■■□□□ 1.97
SC5D-207ENST00000531140 FGD5Q6ZNL6 1462 aa27.34■■□□□ 1.97
SC5D-207ENST00000531140 CHMP7Q8WUX9 453 aaPredicted RBP27.3■■□□□ 1.96
SC5D-207ENST00000531140 CUX1P39880 1505 aa27.29■■□□□ 1.96
SC5D-207ENST00000531140 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
SC5D-207ENST00000531140 CHD1O14646 1710 aa27.29■■□□□ 1.96
SC5D-207ENST00000531140 SNAPC4Q5SXM2 1469 aa27.23■■□□□ 1.95
SC5D-207ENST00000531140 GRIN2BQ13224 1484 aa27.22■■□□□ 1.95
SC5D-207ENST00000531140 MAGI1Q96QZ7 1491 aaPredicted RBP27.2■■□□□ 1.95
SC5D-207ENST00000531140 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
SC5D-207ENST00000531140 WRNQ14191 1432 aaPredicted RBP eCLIP27.15■■□□□ 1.94
SC5D-207ENST00000531140 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
SC5D-207ENST00000531140 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
SC5D-207ENST00000531140 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
SC5D-207ENST00000531140 SYNJ2O15056 1496 aa27.11■■□□□ 1.93
SC5D-207ENST00000531140 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
SC5D-207ENST00000531140 TRHP20396 242 aaPredicted RBP27.09■■□□□ 1.93
SC5D-207ENST00000531140 PHF23Q9BUL5 403 aaPredicted RBP27.08■■□□□ 1.93
SC5D-207ENST00000531140 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
SC5D-207ENST00000531140 CLASP1Q7Z460 1538 aa27.04■■□□□ 1.92
SC5D-207ENST00000531140 PBRM1Q86U86 1689 aa26.94■■□□□ 1.9
SC5D-207ENST00000531140 ABCA5Q8WWZ7 1642 aa26.92■■□□□ 1.9
SC5D-207ENST00000531140 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
SC5D-207ENST00000531140 SENP3Q9H4L4 574 aaPredicted RBP26.8■■□□□ 1.88
SC5D-207ENST00000531140 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
SC5D-207ENST00000531140 NUP160Q12769 1436 aa26.74■■□□□ 1.87
SC5D-207ENST00000531140 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
SC5D-207ENST00000531140 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
SC5D-207ENST00000531140 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
SC5D-207ENST00000531140 JPH4Q96JJ6 628 aa26.6■■□□□ 1.85
SC5D-207ENST00000531140 KIF27Q86VH2 1401 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms