RNA–Protein interactions for RNA: ENST00000430877.5

PDCD6IP-204, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 3

Gene PDCD6IP, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-204ENST00000430877 NISCHQ9Y2I1 1504 aa40.34■■■■■ 4.05
PDCD6IP-204ENST00000430877 CCDC180Q9P1Z9 1646 aa36.19■■■■□ 3.38
PDCD6IP-204ENST00000430877 ABCC9O60706 1549 aa35.44■■■■□ 3.26
PDCD6IP-204ENST00000430877 RB1CC1Q8TDY2 1594 aa34.13■■■■□ 3.05
PDCD6IP-204ENST00000430877 NACADO15069 1562 aa34.04■■■■□ 3.04
PDCD6IP-204ENST00000430877 MYO15BQ96JP2 1530 aa33.85■■■■□ 3.01
PDCD6IP-204ENST00000430877 ZCCHC6Q5VYS8 1495 aaKnown RBP33.57■■■□□ 2.97
PDCD6IP-204ENST00000430877 DCAF1Q9Y4B6 1507 aa33.53■■■□□ 2.96
PDCD6IP-204ENST00000430877 DCAF8L2P0C7V8 631 aa33.4■■■□□ 2.94
PDCD6IP-204ENST00000430877 UNC13AQ9UPW8 1703 aa33.39■■■□□ 2.94
PDCD6IP-204ENST00000430877 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
PDCD6IP-204ENST00000430877 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
PDCD6IP-204ENST00000430877 PABPN1Q86U42 306 aaKnown RBP eCLIP32.91■■■□□ 2.86
PDCD6IP-204ENST00000430877 DNAJC5BQ9UF47 199 aa32.84■■■□□ 2.85
PDCD6IP-204ENST00000430877 SCRIBQ14160 1630 aa32.73■■■□□ 2.83
PDCD6IP-204ENST00000430877 EIF4G1Q04637 1599 aaKnown RBP32.24■■■□□ 2.75
PDCD6IP-204ENST00000430877 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
PDCD6IP-204ENST00000430877 CECR2Q9BXF3 1484 aa31.97■■■□□ 2.71
PDCD6IP-204ENST00000430877 SMARCA4P51532 1647 aa31.4■■■□□ 2.62
PDCD6IP-204ENST00000430877 NCAPD3P42695 1498 aa31.38■■■□□ 2.61
PDCD6IP-204ENST00000430877 BAZ1AQ9NRL2 1556 aaPredicted RBP31.32■■■□□ 2.6
PDCD6IP-204ENST00000430877 SMARCA2P51531 1590 aa31.3■■■□□ 2.6
PDCD6IP-204ENST00000430877 ATAD2BQ9ULI0 1458 aa31.28■■■□□ 2.6
PDCD6IP-204ENST00000430877 HMGXB3Q12766 1538 aa31.26■■■□□ 2.59
PDCD6IP-204ENST00000430877 PEG3Q9GZU2 1588 aa31.23■■■□□ 2.59
PDCD6IP-204ENST00000430877 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
PDCD6IP-204ENST00000430877 BAZ1BQ9UIG0 1483 aaKnown RBP30.97■■■□□ 2.55
PDCD6IP-204ENST00000430877 WIZO95785 1651 aa30.65■■■□□ 2.5
PDCD6IP-204ENST00000430877 LAMC3Q9Y6N6 1575 aa30.64■■■□□ 2.5
PDCD6IP-204ENST00000430877 ERCC6Q03468 1493 aa30.6■■■□□ 2.49
PDCD6IP-204ENST00000430877 CUX2O14529 1486 aa30.59■■■□□ 2.49
PDCD6IP-204ENST00000430877 NESP48681 1621 aa30.57■■■□□ 2.48
PDCD6IP-204ENST00000430877 RSF1Q96T23 1441 aaPredicted RBP30.52■■■□□ 2.48
PDCD6IP-204ENST00000430877 DNAJC5Q9H3Z4 198 aa30.4■■■□□ 2.46
PDCD6IP-204ENST00000430877 TOP2AP11388 1531 aaKnown RBP30.4■■■□□ 2.46
PDCD6IP-204ENST00000430877 THOC2Q8NI27 1593 aaKnown RBP30.38■■■□□ 2.45
PDCD6IP-204ENST00000430877 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
PDCD6IP-204ENST00000430877 PDS5BQ9NTI5 1447 aa30.35■■■□□ 2.45
PDCD6IP-204ENST00000430877 KIF21AQ7Z4S6 1674 aa30.33■■■□□ 2.45
PDCD6IP-204ENST00000430877 CFTRP13569 1480 aa30.17■■■□□ 2.42
PDCD6IP-204ENST00000430877 MRC2Q9UBG0 1479 aa30.07■■■□□ 2.4
PDCD6IP-204ENST00000430877 WDR62O43379 1518 aa30.06■■■□□ 2.4
PDCD6IP-204ENST00000430877 PRDM2Q13029 1718 aa30.05■■■□□ 2.4
PDCD6IP-204ENST00000430877 CEP164Q9UPV0 1460 aa30.03■■■□□ 2.4
PDCD6IP-204ENST00000430877 FANCD2Q9BXW9 1451 aa30■■■□□ 2.39
PDCD6IP-204ENST00000430877 CCDC88BA6NC98 1476 aa29.93■■■□□ 2.38
PDCD6IP-204ENST00000430877 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
PDCD6IP-204ENST00000430877 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
PDCD6IP-204ENST00000430877 TOPBP1Q92547 1522 aa29.51■■■□□ 2.32
PDCD6IP-204ENST00000430877 DNMBPQ6XZF7 1577 aa29.49■■■□□ 2.31
PDCD6IP-204ENST00000430877 IFT140Q96RY7 1462 aa29.44■■■□□ 2.3
PDCD6IP-204ENST00000430877 TARBP1Q13395 1621 aaKnown RBP29.28■■■□□ 2.28
PDCD6IP-204ENST00000430877 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
PDCD6IP-204ENST00000430877 POLA1P09884 1462 aaPredicted RBP29.23■■■□□ 2.27
PDCD6IP-204ENST00000430877 EIF4G3O43432 1585 aaKnown RBP29.22■■■□□ 2.27
PDCD6IP-204ENST00000430877 WDR97A6NE52 1622 aa29.17■■■□□ 2.26
PDCD6IP-204ENST00000430877 SUPT5HO00267 1087 aaKnown RBP29.15■■■□□ 2.26
PDCD6IP-204ENST00000430877 CUX1P39880 1505 aa29.14■■■□□ 2.25
PDCD6IP-204ENST00000430877 FGD5Q6ZNL6 1462 aa29.07■■■□□ 2.24
PDCD6IP-204ENST00000430877 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
PDCD6IP-204ENST00000430877 SOGA1O94964 1423 aa29.03■■■□□ 2.24
PDCD6IP-204ENST00000430877 RAD54L2Q9Y4B4 1467 aa29■■■□□ 2.23
PDCD6IP-204ENST00000430877 AQRO60306 1485 aaKnown RBP eCLIP28.98■■■□□ 2.232e-9■■□□□ 12.5
PDCD6IP-204ENST00000430877 CHD1O14646 1710 aa28.91■■■□□ 2.22
PDCD6IP-204ENST00000430877 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
PDCD6IP-204ENST00000430877 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
PDCD6IP-204ENST00000430877 TOP2BQ02880 1626 aa28.86■■■□□ 2.21
PDCD6IP-204ENST00000430877 TDRD9Q8NDG6 1382 aaKnown RBP28.84■■■□□ 2.21
PDCD6IP-204ENST00000430877 MAGI1Q96QZ7 1491 aaPredicted RBP28.84■■■□□ 2.21
PDCD6IP-204ENST00000430877 TRIM41Q8WV44 630 aa28.83■■■□□ 2.21
PDCD6IP-204ENST00000430877 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
PDCD6IP-204ENST00000430877 GRIN2BQ13224 1484 aa28.81■■■□□ 2.2
PDCD6IP-204ENST00000430877 PBRM1Q86U86 1689 aa28.79■■■□□ 2.2
PDCD6IP-204ENST00000430877 WRNQ14191 1432 aaPredicted RBP eCLIP28.78■■■□□ 2.2
PDCD6IP-204ENST00000430877 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
PDCD6IP-204ENST00000430877 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
PDCD6IP-204ENST00000430877 RIMBP3CA6NJZ7 1639 aa28.75■■■□□ 2.19
PDCD6IP-204ENST00000430877 RIMBP3BA6NNM3 1639 aa28.75■■■□□ 2.19
PDCD6IP-204ENST00000430877 RIMBP3Q9UFD9 1639 aa28.75■■■□□ 2.19
PDCD6IP-204ENST00000430877 GAPVD1Q14C86 1478 aa28.73■■■□□ 2.19
PDCD6IP-204ENST00000430877 ARHGEF11O15085 1522 aa28.71■■■□□ 2.19
PDCD6IP-204ENST00000430877 SYNJ2O15056 1496 aa28.7■■■□□ 2.18
PDCD6IP-204ENST00000430877 CLASP1Q7Z460 1538 aa28.65■■■□□ 2.18
PDCD6IP-204ENST00000430877 FBLN2P98095 1184 aa28.54■■■□□ 2.16
PDCD6IP-204ENST00000430877 ADAMTS12P58397 1594 aa28.54■■■□□ 2.16
PDCD6IP-204ENST00000430877 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
PDCD6IP-204ENST00000430877 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
PDCD6IP-204ENST00000430877 GRIN2AQ12879 1464 aa28.45■■■□□ 2.14
PDCD6IP-204ENST00000430877 ARAP1Q96P48 1450 aa28.43■■■□□ 2.14
PDCD6IP-204ENST00000430877 FHAD1B1AJZ9 1412 aa28.42■■■□□ 2.14
PDCD6IP-204ENST00000430877 NUP160Q12769 1436 aa28.38■■■□□ 2.13
PDCD6IP-204ENST00000430877 CEP170Q5SW79 1584 aa28.33■■■□□ 2.12
PDCD6IP-204ENST00000430877 SHROOM2Q13796 1616 aa28.28■■■□□ 2.12
PDCD6IP-204ENST00000430877 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
PDCD6IP-204ENST00000430877 CUL7Q14999 1698 aa28.23■■■□□ 2.11
PDCD6IP-204ENST00000430877 KIF27Q86VH2 1401 aa28.21■■■□□ 2.11
PDCD6IP-204ENST00000430877 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
PDCD6IP-204ENST00000430877 IGF1RP08069 1367 aa28.11■■■□□ 2.09
PDCD6IP-204ENST00000430877 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
PDCD6IP-204ENST00000430877 KIAA0586Q9BVV6 1533 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms