RNA–Protein interactions for RNA: ENST00000420216.5

CAP1-210, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 5

Gene CAP1, Length 668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-210ENST00000420216 NISCHQ9Y2I1 1504 aa36.15■■■■□ 3.38
CAP1-210ENST00000420216 CCDC180Q9P1Z9 1646 aa32.21■■■□□ 2.75
CAP1-210ENST00000420216 ABCC9O60706 1549 aa31.95■■■□□ 2.71
CAP1-210ENST00000420216 RB1CC1Q8TDY2 1594 aa30.43■■■□□ 2.46
CAP1-210ENST00000420216 NACADO15069 1562 aa30.32■■■□□ 2.44
CAP1-210ENST00000420216 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
CAP1-210ENST00000420216 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
CAP1-210ENST00000420216 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.39
CAP1-210ENST00000420216 UNC13AQ9UPW8 1703 aa29.98■■■□□ 2.39
CAP1-210ENST00000420216 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
CAP1-210ENST00000420216 DCAF1Q9Y4B6 1507 aa29.8■■■□□ 2.36
CAP1-210ENST00000420216 DNAJC5BQ9UF47 199 aa29.77■■■□□ 2.36
CAP1-210ENST00000420216 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.35
CAP1-210ENST00000420216 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
CAP1-210ENST00000420216 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
CAP1-210ENST00000420216 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
CAP1-210ENST00000420216 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
CAP1-210ENST00000420216 CECR2Q9BXF3 1484 aa28.66■■■□□ 2.18
CAP1-210ENST00000420216 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
CAP1-210ENST00000420216 ATAD2BQ9ULI0 1458 aa28.06■■■□□ 2.08
CAP1-210ENST00000420216 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
CAP1-210ENST00000420216 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
CAP1-210ENST00000420216 BAZ1AQ9NRL2 1556 aaPredicted RBP27.95■■■□□ 2.07
CAP1-210ENST00000420216 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
CAP1-210ENST00000420216 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
CAP1-210ENST00000420216 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
CAP1-210ENST00000420216 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
CAP1-210ENST00000420216 WIZO95785 1651 aa27.65■■■□□ 2.02
CAP1-210ENST00000420216 NESP48681 1621 aa27.64■■■□□ 2.02
CAP1-210ENST00000420216 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
CAP1-210ENST00000420216 ERCC6Q03468 1493 aa27.39■■□□□ 1.98
CAP1-210ENST00000420216 LAMC3Q9Y6N6 1575 aa27.3■■□□□ 1.96
CAP1-210ENST00000420216 KIF21AQ7Z4S6 1674 aa27.25■■□□□ 1.95
CAP1-210ENST00000420216 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
CAP1-210ENST00000420216 TOP2AP11388 1531 aaKnown RBP27.22■■□□□ 1.95
CAP1-210ENST00000420216 CUX2O14529 1486 aa27.21■■□□□ 1.95
CAP1-210ENST00000420216 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
CAP1-210ENST00000420216 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
CAP1-210ENST00000420216 CFTRP13569 1480 aa27■■□□□ 1.91
CAP1-210ENST00000420216 CCDC88BA6NC98 1476 aa26.95■■□□□ 1.91
CAP1-210ENST00000420216 FANCD2Q9BXW9 1451 aa26.91■■□□□ 1.9
CAP1-210ENST00000420216 MRC2Q9UBG0 1479 aa26.91■■□□□ 1.9
CAP1-210ENST00000420216 WDR62O43379 1518 aa26.87■■□□□ 1.89
CAP1-210ENST00000420216 CEP164Q9UPV0 1460 aa26.86■■□□□ 1.89
CAP1-210ENST00000420216 DNAJC5Q9H3Z4 198 aa26.81■■□□□ 1.88
CAP1-210ENST00000420216 URB2Q14146 1524 aaKnown RBP26.76■■□□□ 1.87
CAP1-210ENST00000420216 PRDM2Q13029 1718 aa26.76■■□□□ 1.87
CAP1-210ENST00000420216 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
CAP1-210ENST00000420216 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
CAP1-210ENST00000420216 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.82
CAP1-210ENST00000420216 DNMBPQ6XZF7 1577 aa26.37■■□□□ 1.81
CAP1-210ENST00000420216 IFT140Q96RY7 1462 aa26.29■■□□□ 1.8
CAP1-210ENST00000420216 TARBP1Q13395 1621 aaKnown RBP26.26■■□□□ 1.79
CAP1-210ENST00000420216 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
CAP1-210ENST00000420216 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
CAP1-210ENST00000420216 CUX1P39880 1505 aa26.24■■□□□ 1.79
CAP1-210ENST00000420216 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.79
CAP1-210ENST00000420216 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.78
CAP1-210ENST00000420216 AQRO60306 1485 aaKnown RBP eCLIP26.15■■□□□ 1.781e-6■■■■□ 24.9
CAP1-210ENST00000420216 FGD5Q6ZNL6 1462 aa26.14■■□□□ 1.78
CAP1-210ENST00000420216 SOGA1O94964 1423 aa26.05■■□□□ 1.76
CAP1-210ENST00000420216 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
CAP1-210ENST00000420216 OSCARQ8IYS5 282 aa26■■□□□ 1.75
CAP1-210ENST00000420216 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
CAP1-210ENST00000420216 CHD1O14646 1710 aa25.97■■□□□ 1.75
CAP1-210ENST00000420216 SYNJ1O43426 1573 aa25.92■■□□□ 1.74
CAP1-210ENST00000420216 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
CAP1-210ENST00000420216 BIVM-ERCC5R4GMW8 1640 aa25.85■■□□□ 1.73
CAP1-210ENST00000420216 TOP2BQ02880 1626 aa25.83■■□□□ 1.73
CAP1-210ENST00000420216 WRNQ14191 1432 aaPredicted RBP eCLIP25.82■■□□□ 1.722e-8■■■□□ 16.7
CAP1-210ENST00000420216 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
CAP1-210ENST00000420216 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
CAP1-210ENST00000420216 RIMBP3CA6NJZ7 1639 aa25.81■■□□□ 1.72
CAP1-210ENST00000420216 RIMBP3BA6NNM3 1639 aa25.81■■□□□ 1.72
CAP1-210ENST00000420216 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
CAP1-210ENST00000420216 RIMBP3Q9UFD9 1639 aa25.81■■□□□ 1.72
CAP1-210ENST00000420216 PBRM1Q86U86 1689 aa25.78■■□□□ 1.72
CAP1-210ENST00000420216 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
CAP1-210ENST00000420216 FBLN2P98095 1184 aa25.76■■□□□ 1.71
CAP1-210ENST00000420216 GAPVD1Q14C86 1478 aa25.75■■□□□ 1.71
CAP1-210ENST00000420216 ARHGEF11O15085 1522 aa25.73■■□□□ 1.71
CAP1-210ENST00000420216 MAGI1Q96QZ7 1491 aaPredicted RBP25.71■■□□□ 1.71
CAP1-210ENST00000420216 CLASP1Q7Z460 1538 aa25.66■■□□□ 1.7
CAP1-210ENST00000420216 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
CAP1-210ENST00000420216 CHMP7Q8WUX9 453 aaPredicted RBP25.59■■□□□ 1.69
CAP1-210ENST00000420216 ADAMTS12P58397 1594 aa25.57■■□□□ 1.68
CAP1-210ENST00000420216 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
CAP1-210ENST00000420216 GRIN2AQ12879 1464 aa25.48■■□□□ 1.67
CAP1-210ENST00000420216 CEP170Q5SW79 1584 aa25.47■■□□□ 1.67
CAP1-210ENST00000420216 CYB5RLQ6IPT4 315 aa25.46■■□□□ 1.67
CAP1-210ENST00000420216 ERICH3Q5RHP9 1530 aa25.45■■□□□ 1.66
CAP1-210ENST00000420216 ERCC6L2Q5T890 1561 aa25.42■■□□□ 1.66
CAP1-210ENST00000420216 FHAD1B1AJZ9 1412 aa25.41■■□□□ 1.66
CAP1-210ENST00000420216 NUP160Q12769 1436 aa25.4■■□□□ 1.66
CAP1-210ENST00000420216 IGF1RP08069 1367 aa25.3■■□□□ 1.64
CAP1-210ENST00000420216 SHROOM2Q13796 1616 aa25.27■■□□□ 1.64
CAP1-210ENST00000420216 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
CAP1-210ENST00000420216 RUSC2Q8N2Y8 1516 aa25.21■■□□□ 1.63
CAP1-210ENST00000420216 CUL7Q14999 1698 aa25.14■■□□□ 1.62
CAP1-210ENST00000420216 PRG4Q92954 1404 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms