RNA–Protein interactions for RNA: ENST00000495918.1

LAMC1-206, Transcript of laminin subunit gamma 1, humanhuman

TSL 2

Gene LAMC1, Length 672 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1-206ENST00000495918 AEBP2Q6ZN18 517 aaPredicted RBP23.82■■□□□ 1.4
LAMC1-206ENST00000495918 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
LAMC1-206ENST00000495918 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
LAMC1-206ENST00000495918 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
LAMC1-206ENST00000495918 FOXD1Q16676 465 aa18.9■□□□□ 0.62
LAMC1-206ENST00000495918 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
LAMC1-206ENST00000495918 ADRA2BP18089 450 aa17.83■□□□□ 0.44
LAMC1-206ENST00000495918 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
LAMC1-206ENST00000495918 PIAS4Q8N2W9 510 aaPredicted RBP17.79■□□□□ 0.44
LAMC1-206ENST00000495918 MSH5O43196 834 aa17.63■□□□□ 0.41
LAMC1-206ENST00000495918 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
LAMC1-206ENST00000495918 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
LAMC1-206ENST00000495918 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
LAMC1-206ENST00000495918 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
LAMC1-206ENST00000495918 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
LAMC1-206ENST00000495918 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
LAMC1-206ENST00000495918 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
LAMC1-206ENST00000495918 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
LAMC1-206ENST00000495918 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
LAMC1-206ENST00000495918 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
LAMC1-206ENST00000495918 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
LAMC1-206ENST00000495918 KCNA4P22459 653 aa15.33■□□□□ 0.04
LAMC1-206ENST00000495918 RNF39Q9H2S5 420 aa15.03■□□□□ -0
LAMC1-206ENST00000495918 CACNB1Q02641 598 aaPredicted RBP15.02■□□□□ -0
LAMC1-206ENST00000495918 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
LAMC1-206ENST00000495918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.012e-9■■■■□ 21.7
LAMC1-206ENST00000495918 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
LAMC1-206ENST00000495918 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
LAMC1-206ENST00000495918 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
LAMC1-206ENST00000495918 SLC4A1APQ9BWU0 796 aaKnown RBP14.57□□□□□ -0.08
LAMC1-206ENST00000495918 CAPN15O75808 1086 aa14.39□□□□□ -0.11
LAMC1-206ENST00000495918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
LAMC1-206ENST00000495918 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
LAMC1-206ENST00000495918 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
LAMC1-206ENST00000495918 APLP2Q06481 763 aa14.34□□□□□ -0.11
LAMC1-206ENST00000495918 MYCNP04198 464 aaPredicted RBP14.28□□□□□ -0.12
LAMC1-206ENST00000495918 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
LAMC1-206ENST00000495918 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
LAMC1-206ENST00000495918 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
LAMC1-206ENST00000495918 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
LAMC1-206ENST00000495918 DSG3P32926 999 aa14.16□□□□□ -0.14
LAMC1-206ENST00000495918 ABCB7O75027 752 aa14.07□□□□□ -0.16
LAMC1-206ENST00000495918 ZBTB22O15209 634 aa14.06□□□□□ -0.16
LAMC1-206ENST00000495918 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
LAMC1-206ENST00000495918 POLA2Q14181 598 aa13.86□□□□□ -0.19
LAMC1-206ENST00000495918 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
LAMC1-206ENST00000495918 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
LAMC1-206ENST00000495918 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
LAMC1-206ENST00000495918 ZBTB12Q9Y330 459 aaPredicted RBP13.62□□□□□ -0.23
LAMC1-206ENST00000495918 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
LAMC1-206ENST00000495918 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
LAMC1-206ENST00000495918 FBLN2P98095 1184 aa13.41□□□□□ -0.26
LAMC1-206ENST00000495918 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
LAMC1-206ENST00000495918 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
LAMC1-206ENST00000495918 POTEHQ6S545 545 aa13.21□□□□□ -0.29
LAMC1-206ENST00000495918 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
LAMC1-206ENST00000495918 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
LAMC1-206ENST00000495918 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
LAMC1-206ENST00000495918 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
LAMC1-206ENST00000495918 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
LAMC1-206ENST00000495918 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
LAMC1-206ENST00000495918 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
LAMC1-206ENST00000495918 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
LAMC1-206ENST00000495918 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
LAMC1-206ENST00000495918 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
LAMC1-206ENST00000495918 SPDYE1Q8NFV5 336 aaPredicted RBP12.91□□□□□ -0.34
LAMC1-206ENST00000495918 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
LAMC1-206ENST00000495918 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
LAMC1-206ENST00000495918 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.364e-16■■□□□ 12.4
LAMC1-206ENST00000495918 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
LAMC1-206ENST00000495918 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
LAMC1-206ENST00000495918 HAX1O00165 279 aa12.64□□□□□ -0.39
LAMC1-206ENST00000495918 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
LAMC1-206ENST00000495918 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
LAMC1-206ENST00000495918 SP7Q8TDD2 431 aaPredicted RBP12.5□□□□□ -0.41
LAMC1-206ENST00000495918 FKBP8Q14318 412 aa12.45□□□□□ -0.42
LAMC1-206ENST00000495918 PROM2Q8N271 834 aa12.44□□□□□ -0.42
LAMC1-206ENST00000495918 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
LAMC1-206ENST00000495918 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
LAMC1-206ENST00000495918 EVX2Q03828 476 aa12.4□□□□□ -0.42
LAMC1-206ENST00000495918 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
LAMC1-206ENST00000495918 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.44
LAMC1-206ENST00000495918 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
LAMC1-206ENST00000495918 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
LAMC1-206ENST00000495918 MIER1Q8N108 512 aa12.22□□□□□ -0.45
LAMC1-206ENST00000495918 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
LAMC1-206ENST00000495918 ZRANB1Q9UGI0 708 aa12.19□□□□□ -0.46
LAMC1-206ENST00000495918 MNX1P50219 401 aaPredicted RBP12.18□□□□□ -0.46
LAMC1-206ENST00000495918 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
LAMC1-206ENST00000495918 GABBR2O75899 941 aa12.17□□□□□ -0.46
LAMC1-206ENST00000495918 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
LAMC1-206ENST00000495918 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
LAMC1-206ENST00000495918 CLCN6P51797 869 aa12.06□□□□□ -0.48
LAMC1-206ENST00000495918 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
LAMC1-206ENST00000495918 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
LAMC1-206ENST00000495918 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
LAMC1-206ENST00000495918 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
LAMC1-206ENST00000495918 GALR2O43603 387 aaPredicted RBP11.95□□□□□ -0.5
LAMC1-206ENST00000495918 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
LAMC1-206ENST00000495918 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms