RNA–Protein interactions for RNA: ENST00000449038.5

PLOD1-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 1, humanhuman

TSL 5

Gene PLOD1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD1-204ENST00000449038 NISCHQ9Y2I1 1504 aa40.97■■■■■ 4.15
PLOD1-204ENST00000449038 CCDC180Q9P1Z9 1646 aa36.48■■■■□ 3.43
PLOD1-204ENST00000449038 ABCC9O60706 1549 aa35.92■■■■□ 3.34
PLOD1-204ENST00000449038 DCAF8L2P0C7V8 631 aa34.6■■■■□ 3.13
PLOD1-204ENST00000449038 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
PLOD1-204ENST00000449038 NACADO15069 1562 aa34.42■■■■□ 3.1
PLOD1-204ENST00000449038 MYO15BQ96JP2 1530 aa34.12■■■■□ 3.05
PLOD1-204ENST00000449038 ZCCHC6Q5VYS8 1495 aaKnown RBP34.05■■■■□ 3.04
PLOD1-204ENST00000449038 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
PLOD1-204ENST00000449038 PABPN1Q86U42 306 aaKnown RBP eCLIP33.59■■■□□ 2.97
PLOD1-204ENST00000449038 UNC13AQ9UPW8 1703 aa33.48■■■□□ 2.95
PLOD1-204ENST00000449038 SCRIBQ14160 1630 aa33.28■■■□□ 2.92
PLOD1-204ENST00000449038 BICRAQ9NZM4 1560 aa33.27■■■□□ 2.92
PLOD1-204ENST00000449038 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
PLOD1-204ENST00000449038 DNAJC5BQ9UF47 199 aa33.02■■■□□ 2.88
PLOD1-204ENST00000449038 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
PLOD1-204ENST00000449038 CC2D2AQ9P2K1 1620 aa32.43■■■□□ 2.78
PLOD1-204ENST00000449038 CECR2Q9BXF3 1484 aa32.33■■■□□ 2.77
PLOD1-204ENST00000449038 BAZ1AQ9NRL2 1556 aaPredicted RBP31.83■■■□□ 2.69
PLOD1-204ENST00000449038 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
PLOD1-204ENST00000449038 NCAPD3P42695 1498 aa31.74■■■□□ 2.67
PLOD1-204ENST00000449038 SMARCA2P51531 1590 aa31.73■■■□□ 2.67
PLOD1-204ENST00000449038 ATAD2BQ9ULI0 1458 aa31.71■■■□□ 2.67
PLOD1-204ENST00000449038 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
PLOD1-204ENST00000449038 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
PLOD1-204ENST00000449038 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.64
PLOD1-204ENST00000449038 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
PLOD1-204ENST00000449038 WIZO95785 1651 aa31.16■■■□□ 2.58
PLOD1-204ENST00000449038 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
PLOD1-204ENST00000449038 ERCC6Q03468 1493 aa31.12■■■□□ 2.57
PLOD1-204ENST00000449038 NESP48681 1621 aa30.95■■■□□ 2.55
PLOD1-204ENST00000449038 LAMC3Q9Y6N6 1575 aa30.95■■■□□ 2.54
PLOD1-204ENST00000449038 TOP2AP11388 1531 aaKnown RBP30.89■■■□□ 2.54
PLOD1-204ENST00000449038 CADPSQ9ULU8 1353 aa30.87■■■□□ 2.53
PLOD1-204ENST00000449038 PDS5BQ9NTI5 1447 aa30.87■■■□□ 2.53
PLOD1-204ENST00000449038 CUX2O14529 1486 aa30.76■■■□□ 2.52
PLOD1-204ENST00000449038 CFTRP13569 1480 aa30.57■■■□□ 2.48
PLOD1-204ENST00000449038 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
PLOD1-204ENST00000449038 CCDC88BA6NC98 1476 aa30.53■■■□□ 2.48
PLOD1-204ENST00000449038 CEP164Q9UPV0 1460 aa30.49■■■□□ 2.47
PLOD1-204ENST00000449038 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
PLOD1-204ENST00000449038 THOC2Q8NI27 1593 aaKnown RBP30.48■■■□□ 2.47
PLOD1-204ENST00000449038 MRC2Q9UBG0 1479 aa30.46■■■□□ 2.47
PLOD1-204ENST00000449038 SUPT5HO00267 1087 aaKnown RBP30.43■■■□□ 2.46
PLOD1-204ENST00000449038 WDR62O43379 1518 aa30.28■■■□□ 2.44
PLOD1-204ENST00000449038 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
PLOD1-204ENST00000449038 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
PLOD1-204ENST00000449038 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
PLOD1-204ENST00000449038 DNAJC5Q9H3Z4 198 aa30.04■■■□□ 2.4
PLOD1-204ENST00000449038 TOPBP1Q92547 1522 aa29.93■■■□□ 2.38
PLOD1-204ENST00000449038 DNMBPQ6XZF7 1577 aa29.9■■■□□ 2.38
PLOD1-204ENST00000449038 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
PLOD1-204ENST00000449038 POLA1P09884 1462 aaPredicted RBP29.66■■■□□ 2.34
PLOD1-204ENST00000449038 SOGA1O94964 1423 aa29.64■■■□□ 2.34
PLOD1-204ENST00000449038 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
PLOD1-204ENST00000449038 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
PLOD1-204ENST00000449038 CUX1P39880 1505 aa29.58■■■□□ 2.33
PLOD1-204ENST00000449038 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
PLOD1-204ENST00000449038 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
PLOD1-204ENST00000449038 RAD54L2Q9Y4B4 1467 aa29.53■■■□□ 2.32
PLOD1-204ENST00000449038 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.317e-7■■■■■ 34.2
PLOD1-204ENST00000449038 EIF4G3O43432 1585 aaKnown RBP29.5■■■□□ 2.31
PLOD1-204ENST00000449038 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.31
PLOD1-204ENST00000449038 TDRD9Q8NDG6 1382 aaKnown RBP29.46■■■□□ 2.31
PLOD1-204ENST00000449038 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
PLOD1-204ENST00000449038 FBLN2P98095 1184 aa29.4■■■□□ 2.3
PLOD1-204ENST00000449038 TOP2BQ02880 1626 aa29.33■■■□□ 2.29
PLOD1-204ENST00000449038 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
PLOD1-204ENST00000449038 BIVM-ERCC5R4GMW8 1640 aa29.29■■■□□ 2.28
PLOD1-204ENST00000449038 ABCA10Q8WWZ4 1543 aa29.29■■■□□ 2.28
PLOD1-204ENST00000449038 CHMP7Q8WUX9 453 aaPredicted RBP29.28■■■□□ 2.28
PLOD1-204ENST00000449038 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
PLOD1-204ENST00000449038 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
PLOD1-204ENST00000449038 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
PLOD1-204ENST00000449038 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
PLOD1-204ENST00000449038 CHD1O14646 1710 aa29.14■■■□□ 2.25
PLOD1-204ENST00000449038 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
PLOD1-204ENST00000449038 ABCA5Q8WWZ7 1642 aa29.1■■■□□ 2.25
PLOD1-204ENST00000449038 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
PLOD1-204ENST00000449038 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
PLOD1-204ENST00000449038 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
PLOD1-204ENST00000449038 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
PLOD1-204ENST00000449038 KIF27Q86VH2 1401 aa28.93■■■□□ 2.22
PLOD1-204ENST00000449038 ARHGEF11O15085 1522 aa28.92■■■□□ 2.22
PLOD1-204ENST00000449038 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
PLOD1-204ENST00000449038 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
PLOD1-204ENST00000449038 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
PLOD1-204ENST00000449038 GRIN2AQ12879 1464 aa28.87■■■□□ 2.21
PLOD1-204ENST00000449038 ADAMTS12P58397 1594 aa28.87■■■□□ 2.21
PLOD1-204ENST00000449038 CYB5RLQ6IPT4 315 aa28.82■■■□□ 2.2
PLOD1-204ENST00000449038 CLASP1Q7Z460 1538 aa28.82■■■□□ 2.2
PLOD1-204ENST00000449038 IGF1RP08069 1367 aa28.74■■■□□ 2.19
PLOD1-204ENST00000449038 NUP160Q12769 1436 aa28.71■■■□□ 2.19
PLOD1-204ENST00000449038 CUL7Q14999 1698 aa28.67■■■□□ 2.18
PLOD1-204ENST00000449038 CEP170Q5SW79 1584 aa28.64■■■□□ 2.18
PLOD1-204ENST00000449038 CARMIL1Q5VZK9 1371 aa28.63■■■□□ 2.17
PLOD1-204ENST00000449038 ARAP1Q96P48 1450 aa28.63■■■□□ 2.17
PLOD1-204ENST00000449038 JPH4Q96JJ6 628 aa28.57■■■□□ 2.16
PLOD1-204ENST00000449038 PRG4Q92954 1404 aaPredicted RBP28.48■■■□□ 2.15
PLOD1-204ENST00000449038 KIAA0586Q9BVV6 1533 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms