RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 NISCHQ9Y2I1 1504 aa32.39■■■□□ 2.78
PSMB4-201ENST00000290541 ABCC9O60706 1549 aa31■■■□□ 2.55
PSMB4-201ENST00000290541 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
PSMB4-201ENST00000290541 CCDC180Q9P1Z9 1646 aa29.77■■■□□ 2.36
PSMB4-201ENST00000290541 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
PSMB4-201ENST00000290541 DNAJC5Q9H3Z4 198 aa28.85■■■□□ 2.21
PSMB4-201ENST00000290541 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
PSMB4-201ENST00000290541 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
PSMB4-201ENST00000290541 NACADO15069 1562 aa28.4■■■□□ 2.14
PSMB4-201ENST00000290541 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
PSMB4-201ENST00000290541 CECR2Q9BXF3 1484 aa28.08■■■□□ 2.09
PSMB4-201ENST00000290541 CC2D2AQ9P2K1 1620 aa28.01■■■□□ 2.07
PSMB4-201ENST00000290541 SHROOM4Q9ULL8 1493 aa27.66■■■□□ 2.02
PSMB4-201ENST00000290541 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
PSMB4-201ENST00000290541 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
PSMB4-201ENST00000290541 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
PSMB4-201ENST00000290541 CUX2O14529 1486 aa27.34■■□□□ 1.97
PSMB4-201ENST00000290541 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
PSMB4-201ENST00000290541 TRIM41Q8WV44 630 aa26.91■■□□□ 1.9
PSMB4-201ENST00000290541 ERCC6Q03468 1493 aa26.82■■□□□ 1.88
PSMB4-201ENST00000290541 DCAF1Q9Y4B6 1507 aa26.7■■□□□ 1.87
PSMB4-201ENST00000290541 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
PSMB4-201ENST00000290541 THOC2Q8NI27 1593 aaKnown RBP26.4■■□□□ 1.82
PSMB4-201ENST00000290541 NESP48681 1621 aa26.28■■□□□ 1.8
PSMB4-201ENST00000290541 NCAPD3P42695 1498 aa26.22■■□□□ 1.79
PSMB4-201ENST00000290541 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
PSMB4-201ENST00000290541 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
PSMB4-201ENST00000290541 HMGXB3Q12766 1538 aa25.95■■□□□ 1.74
PSMB4-201ENST00000290541 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
PSMB4-201ENST00000290541 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
PSMB4-201ENST00000290541 LAMC3Q9Y6N6 1575 aa25.88■■□□□ 1.73
PSMB4-201ENST00000290541 RIMBP3CA6NJZ7 1639 aa25.73■■□□□ 1.71
PSMB4-201ENST00000290541 RIMBP3BA6NNM3 1639 aa25.73■■□□□ 1.71
PSMB4-201ENST00000290541 RIMBP3Q9UFD9 1639 aa25.73■■□□□ 1.71
PSMB4-201ENST00000290541 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
PSMB4-201ENST00000290541 PDS5BQ9NTI5 1447 aa25.68■■□□□ 1.7
PSMB4-201ENST00000290541 WDR62O43379 1518 aa25.66■■□□□ 1.7
PSMB4-201ENST00000290541 MRC2Q9UBG0 1479 aa25.61■■□□□ 1.69
PSMB4-201ENST00000290541 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
PSMB4-201ENST00000290541 AEBP2Q6ZN18 517 aaPredicted RBP25.59■■□□□ 1.69
PSMB4-201ENST00000290541 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
PSMB4-201ENST00000290541 ARHGEF11O15085 1522 aa25.47■■□□□ 1.67
PSMB4-201ENST00000290541 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
PSMB4-201ENST00000290541 TRHP20396 242 aaPredicted RBP25.32■■□□□ 1.64
PSMB4-201ENST00000290541 CADPSQ9ULU8 1353 aa25.3■■□□□ 1.64
PSMB4-201ENST00000290541 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
PSMB4-201ENST00000290541 CYB5RLQ6IPT4 315 aa25.19■■□□□ 1.62
PSMB4-201ENST00000290541 ARAP1Q96P48 1450 aa25.13■■□□□ 1.61
PSMB4-201ENST00000290541 FANCD2Q9BXW9 1451 aa25.05■■□□□ 1.6
PSMB4-201ENST00000290541 URB2Q14146 1524 aaKnown RBP24.99■■□□□ 1.59
PSMB4-201ENST00000290541 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.58
PSMB4-201ENST00000290541 ZNF608Q9ULD9 1512 aaPredicted RBP24.89■■□□□ 1.57
PSMB4-201ENST00000290541 ILDR1Q86SU0 546 aaPredicted RBP24.88■■□□□ 1.57
PSMB4-201ENST00000290541 CHD1O14646 1710 aa24.83■■□□□ 1.57
PSMB4-201ENST00000290541 RSF1Q96T23 1441 aaPredicted RBP24.83■■□□□ 1.57
PSMB4-201ENST00000290541 CFTRP13569 1480 aa24.77■■□□□ 1.56
PSMB4-201ENST00000290541 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
PSMB4-201ENST00000290541 EIF4G3O43432 1585 aaKnown RBP24.74■■□□□ 1.55
PSMB4-201ENST00000290541 WIZO95785 1651 aa24.6■■□□□ 1.53
PSMB4-201ENST00000290541 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
PSMB4-201ENST00000290541 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
PSMB4-201ENST00000290541 TOPBP1Q92547 1522 aa24.45■■□□□ 1.5
PSMB4-201ENST00000290541 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.54e-8■■■■■ 62.9
PSMB4-201ENST00000290541 TARBP1Q13395 1621 aaKnown RBP24.41■■□□□ 1.5
PSMB4-201ENST00000290541 FBLN2P98095 1184 aa24.4■■□□□ 1.5
PSMB4-201ENST00000290541 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
PSMB4-201ENST00000290541 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
PSMB4-201ENST00000290541 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
PSMB4-201ENST00000290541 KIF13AQ9H1H9 1805 aa24.24■■□□□ 1.47
PSMB4-201ENST00000290541 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
PSMB4-201ENST00000290541 KDM4FA0A1W2PPD8 638 aa24.21■■□□□ 1.47
PSMB4-201ENST00000290541 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
PSMB4-201ENST00000290541 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
PSMB4-201ENST00000290541 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
PSMB4-201ENST00000290541 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
PSMB4-201ENST00000290541 WDR97A6NE52 1622 aa24.03■■□□□ 1.44
PSMB4-201ENST00000290541 ERCC6L2Q5T890 1561 aa24.02■■□□□ 1.44
PSMB4-201ENST00000290541 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
PSMB4-201ENST00000290541 RAD54L2Q9Y4B4 1467 aa24.01■■□□□ 1.43
PSMB4-201ENST00000290541 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
PSMB4-201ENST00000290541 SUPT5HO00267 1087 aaKnown RBP23.99■■□□□ 1.43
PSMB4-201ENST00000290541 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
PSMB4-201ENST00000290541 HECW2Q9P2P5 1572 aa23.9■■□□□ 1.42
PSMB4-201ENST00000290541 KDM6BO15054 1643 aa23.88■■□□□ 1.41
PSMB4-201ENST00000290541 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
PSMB4-201ENST00000290541 SOGA1O94964 1423 aa23.87■■□□□ 1.41
PSMB4-201ENST00000290541 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
PSMB4-201ENST00000290541 PBRM1Q86U86 1689 aa23.81■■□□□ 1.4
PSMB4-201ENST00000290541 CEP170Q5SW79 1584 aa23.8■■□□□ 1.4
PSMB4-201ENST00000290541 ABCC10Q5T3U5 1492 aa23.8■■□□□ 1.4
PSMB4-201ENST00000290541 DIP2BQ9P265 1576 aa23.77■■□□□ 1.4
PSMB4-201ENST00000290541 FBXO41Q8TF61 875 aa23.76■■□□□ 1.39
PSMB4-201ENST00000290541 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
PSMB4-201ENST00000290541 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
PSMB4-201ENST00000290541 ADGRL1O94910 1474 aa23.72■■□□□ 1.39
PSMB4-201ENST00000290541 FAM69CQ0P6D2 419 aa23.7■■□□□ 1.38
PSMB4-201ENST00000290541 MAPKBP1O60336 1514 aa23.67■■□□□ 1.38
PSMB4-201ENST00000290541 TSPOAP1O95153 1857 aa23.62■■□□□ 1.37
PSMB4-201ENST00000290541 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
PSMB4-201ENST00000290541 NUP160Q12769 1436 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms