RNA–Protein interactions for RNA: ENST00000372797.7

CAP1-203, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAP1, Length 3,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-203ENST00000372797 NISCHQ9Y2I1 1504 aa28.35■■■□□ 2.13
CAP1-203ENST00000372797 SHROOM4Q9ULL8 1493 aa24.57■■□□□ 1.52
CAP1-203ENST00000372797 SUPT5HO00267 1087 aaKnown RBP24.08■■□□□ 1.45
CAP1-203ENST00000372797 DCAF8L2P0C7V8 631 aa23.99■■□□□ 1.43
CAP1-203ENST00000372797 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
CAP1-203ENST00000372797 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
CAP1-203ENST00000372797 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
CAP1-203ENST00000372797 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
CAP1-203ENST00000372797 DCAF1Q9Y4B6 1507 aa23.07■■□□□ 1.28
CAP1-203ENST00000372797 HRCP23327 699 aa22.96■■□□□ 1.27
CAP1-203ENST00000372797 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
CAP1-203ENST00000372797 PELP1Q8IZL8 1130 aaKnown RBP22.73■■□□□ 1.23
CAP1-203ENST00000372797 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
CAP1-203ENST00000372797 PCGF6Q9BYE7 350 aa22.66■■□□□ 1.22
CAP1-203ENST00000372797 PPARGC1BQ86YN6 1023 aaKnown RBP22.64■■□□□ 1.21
CAP1-203ENST00000372797 ABCC9O60706 1549 aa22.6■■□□□ 1.21
CAP1-203ENST00000372797 RSF1Q96T23 1441 aaPredicted RBP22.5■■□□□ 1.19
CAP1-203ENST00000372797 FAM9AQ8IZU1 332 aaPredicted RBP22.33■■□□□ 1.16
CAP1-203ENST00000372797 RB1CC1Q8TDY2 1594 aa22.32■■□□□ 1.16
CAP1-203ENST00000372797 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
CAP1-203ENST00000372797 EHMT2Q96KQ7 1210 aa22.31■■□□□ 1.16
CAP1-203ENST00000372797 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
CAP1-203ENST00000372797 NACADO15069 1562 aa22.22■■□□□ 1.15
CAP1-203ENST00000372797 MROH2BQ7Z745 1585 aa22.13■■□□□ 1.13
CAP1-203ENST00000372797 MYT1Q01538 1121 aa22.06■■□□□ 1.12
CAP1-203ENST00000372797 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
CAP1-203ENST00000372797 WIZO95785 1651 aa22.04■■□□□ 1.12
CAP1-203ENST00000372797 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
CAP1-203ENST00000372797 BAZ1AQ9NRL2 1556 aaPredicted RBP21.76■■□□□ 1.07
CAP1-203ENST00000372797 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
CAP1-203ENST00000372797 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.05
CAP1-203ENST00000372797 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
CAP1-203ENST00000372797 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
CAP1-203ENST00000372797 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
CAP1-203ENST00000372797 TOP2AP11388 1531 aaKnown RBP21.57■■□□□ 1.04
CAP1-203ENST00000372797 EIF4G1Q04637 1599 aaKnown RBP21.55■■□□□ 1.04
CAP1-203ENST00000372797 TTBK1Q5TCY1 1321 aaPredicted RBP21.55■■□□□ 1.04
CAP1-203ENST00000372797 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
CAP1-203ENST00000372797 ZEB1P37275 1124 aaPredicted RBP21.46■■□□□ 1.03
CAP1-203ENST00000372797 SOGA1O94964 1423 aa21.4■■□□□ 1.02
CAP1-203ENST00000372797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
CAP1-203ENST00000372797 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
CAP1-203ENST00000372797 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
CAP1-203ENST00000372797 RUSC2Q8N2Y8 1516 aa21.31■■□□□ 1
CAP1-203ENST00000372797 ACIN1Q9UKV3 1341 aaKnown RBP21.3■■□□□ 1
CAP1-203ENST00000372797 NEUROD1Q13562 356 aa21.27■■□□□ 1
CAP1-203ENST00000372797 CEP162Q5TB80 1403 aa21.25■□□□□ 0.99
CAP1-203ENST00000372797 CCER1Q8TC90 406 aaPredicted RBP21.25■□□□□ 0.99
CAP1-203ENST00000372797 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
CAP1-203ENST00000372797 GTF3C3Q9Y5Q9 886 aa21.22■□□□□ 0.99
CAP1-203ENST00000372797 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.982e-8■■■□□ 16.7
CAP1-203ENST00000372797 TNIKQ9UKE5 1360 aa21.13■□□□□ 0.97
CAP1-203ENST00000372797 RANGAP1P46060 587 aaPredicted RBP21.12■□□□□ 0.97
CAP1-203ENST00000372797 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.96
CAP1-203ENST00000372797 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
CAP1-203ENST00000372797 EEA1Q15075 1411 aa21.06■□□□□ 0.96
CAP1-203ENST00000372797 SYNJ1O43426 1573 aa21.05■□□□□ 0.96
CAP1-203ENST00000372797 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
CAP1-203ENST00000372797 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
CAP1-203ENST00000372797 CENPBP07199 599 aaPredicted RBP20.98■□□□□ 0.95
CAP1-203ENST00000372797 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
CAP1-203ENST00000372797 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.94
CAP1-203ENST00000372797 CLIP1P30622 1438 aa20.86■□□□□ 0.93
CAP1-203ENST00000372797 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
CAP1-203ENST00000372797 APLP2Q06481 763 aa20.8■□□□□ 0.92
CAP1-203ENST00000372797 KIF21BO75037 1637 aa20.8■□□□□ 0.92
CAP1-203ENST00000372797 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
CAP1-203ENST00000372797 VPS8Q8N3P4 1428 aa20.71■□□□□ 0.91
CAP1-203ENST00000372797 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
CAP1-203ENST00000372797 YTHDC1Q96MU7 727 aaKnown RBP20.64■□□□□ 0.89
CAP1-203ENST00000372797 BCL11AQ9H165 835 aa20.64■□□□□ 0.89
CAP1-203ENST00000372797 BIVM-ERCC5R4GMW8 1640 aa20.59■□□□□ 0.89
CAP1-203ENST00000372797 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
CAP1-203ENST00000372797 CUX1P39880 1505 aa20.58■□□□□ 0.89
CAP1-203ENST00000372797 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
CAP1-203ENST00000372797 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
CAP1-203ENST00000372797 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
CAP1-203ENST00000372797 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
CAP1-203ENST00000372797 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
CAP1-203ENST00000372797 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
CAP1-203ENST00000372797 CFTRP13569 1480 aa20.46■□□□□ 0.87
CAP1-203ENST00000372797 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
CAP1-203ENST00000372797 ITGAEP38570 1179 aa20.43■□□□□ 0.86
CAP1-203ENST00000372797 CUX2O14529 1486 aa20.37■□□□□ 0.85
CAP1-203ENST00000372797 MIER1Q8N108 512 aa20.36■□□□□ 0.85
CAP1-203ENST00000372797 PRKCSHP14314 528 aaPredicted RBP20.35■□□□□ 0.85
CAP1-203ENST00000372797 ARHGAP35Q9NRY4 1499 aa20.31■□□□□ 0.84
CAP1-203ENST00000372797 P3H3Q8IVL6 736 aa20.29■□□□□ 0.84
CAP1-203ENST00000372797 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
CAP1-203ENST00000372797 ATP1B4Q9UN42 357 aaPredicted RBP20.28■□□□□ 0.84
CAP1-203ENST00000372797 IGF1RP08069 1367 aa20.28■□□□□ 0.84
CAP1-203ENST00000372797 ANP32EQ9BTT0 268 aa20.27■□□□□ 0.83
CAP1-203ENST00000372797 DHX57Q6P158 1386 aaKnown RBP20.26■□□□□ 0.83
CAP1-203ENST00000372797 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
CAP1-203ENST00000372797 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
CAP1-203ENST00000372797 PRDM2Q13029 1718 aa20.2■□□□□ 0.82
CAP1-203ENST00000372797 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
CAP1-203ENST00000372797 CCNB3Q8WWL7 1395 aa20.19■□□□□ 0.82
CAP1-203ENST00000372797 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
CAP1-203ENST00000372797 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms