RNA–Protein interactions for RNA: ENST00000372798.5

CAP1-204, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CAP1, Length 1,563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-204ENST00000372798 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
CAP1-204ENST00000372798 CCDC180Q9P1Z9 1646 aa24.77■■□□□ 1.56
CAP1-204ENST00000372798 ABCC9O60706 1549 aa24.51■■□□□ 1.51
CAP1-204ENST00000372798 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
CAP1-204ENST00000372798 NACADO15069 1562 aa23.34■■□□□ 1.33
CAP1-204ENST00000372798 MYO15BQ96JP2 1530 aa23.11■■□□□ 1.29
CAP1-204ENST00000372798 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
CAP1-204ENST00000372798 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
CAP1-204ENST00000372798 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
CAP1-204ENST00000372798 DCAF1Q9Y4B6 1507 aa22.88■■□□□ 1.25
CAP1-204ENST00000372798 DNAJC5BQ9UF47 199 aa22.83■■□□□ 1.25
CAP1-204ENST00000372798 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.24
CAP1-204ENST00000372798 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
CAP1-204ENST00000372798 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
CAP1-204ENST00000372798 SHROOM4Q9ULL8 1493 aa22.5■■□□□ 1.19
CAP1-204ENST00000372798 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
CAP1-204ENST00000372798 CC2D2AQ9P2K1 1620 aa22.19■■□□□ 1.14
CAP1-204ENST00000372798 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
CAP1-204ENST00000372798 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
CAP1-204ENST00000372798 NCAPD3P42695 1498 aa21.54■■□□□ 1.04
CAP1-204ENST00000372798 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
CAP1-204ENST00000372798 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
CAP1-204ENST00000372798 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
CAP1-204ENST00000372798 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
CAP1-204ENST00000372798 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
CAP1-204ENST00000372798 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
CAP1-204ENST00000372798 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
CAP1-204ENST00000372798 NESP48681 1621 aa21.13■□□□□ 0.97
CAP1-204ENST00000372798 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
CAP1-204ENST00000372798 CUX2O14529 1486 aa21.08■□□□□ 0.96
CAP1-204ENST00000372798 WIZO95785 1651 aa21.07■□□□□ 0.96
CAP1-204ENST00000372798 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
CAP1-204ENST00000372798 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
CAP1-204ENST00000372798 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
CAP1-204ENST00000372798 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
CAP1-204ENST00000372798 CADPSQ9ULU8 1353 aa20.86■□□□□ 0.93
CAP1-204ENST00000372798 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
CAP1-204ENST00000372798 DNAJC5Q9H3Z4 198 aa20.81■□□□□ 0.92
CAP1-204ENST00000372798 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
CAP1-204ENST00000372798 CFTRP13569 1480 aa20.7■□□□□ 0.9
CAP1-204ENST00000372798 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
CAP1-204ENST00000372798 WDR62O43379 1518 aa20.67■□□□□ 0.9
CAP1-204ENST00000372798 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.9
CAP1-204ENST00000372798 FANCD2Q9BXW9 1451 aa20.64■□□□□ 0.89
CAP1-204ENST00000372798 PRDM2Q13029 1718 aa20.57■□□□□ 0.88
CAP1-204ENST00000372798 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
CAP1-204ENST00000372798 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
CAP1-204ENST00000372798 TOPBP1Q92547 1522 aa20.28■□□□□ 0.84
CAP1-204ENST00000372798 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
CAP1-204ENST00000372798 DNMBPQ6XZF7 1577 aa20.24■□□□□ 0.83
CAP1-204ENST00000372798 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
CAP1-204ENST00000372798 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
CAP1-204ENST00000372798 TARBP1Q13395 1621 aaKnown RBP20.12■□□□□ 0.81
CAP1-204ENST00000372798 EIF4G3O43432 1585 aaKnown RBP20.11■□□□□ 0.81
CAP1-204ENST00000372798 POLA1P09884 1462 aaPredicted RBP20.09■□□□□ 0.81
CAP1-204ENST00000372798 OSCARQ8IYS5 282 aa20.08■□□□□ 0.8
CAP1-204ENST00000372798 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
CAP1-204ENST00000372798 CUX1P39880 1505 aa20.01■□□□□ 0.79
CAP1-204ENST00000372798 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.791e-6■■■■□ 21.4
CAP1-204ENST00000372798 RAD54L2Q9Y4B4 1467 aa19.99■□□□□ 0.79
CAP1-204ENST00000372798 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
CAP1-204ENST00000372798 SOGA1O94964 1423 aa19.95■□□□□ 0.78
CAP1-204ENST00000372798 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
CAP1-204ENST00000372798 CHD1O14646 1710 aa19.93■□□□□ 0.78
CAP1-204ENST00000372798 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
CAP1-204ENST00000372798 TDRD9Q8NDG6 1382 aaKnown RBP19.89■□□□□ 0.77
CAP1-204ENST00000372798 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
CAP1-204ENST00000372798 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
CAP1-204ENST00000372798 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
CAP1-204ENST00000372798 ARHGEF11O15085 1522 aa19.82■□□□□ 0.76
CAP1-204ENST00000372798 SNAPC4Q5SXM2 1469 aa19.82■□□□□ 0.76
CAP1-204ENST00000372798 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
CAP1-204ENST00000372798 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
CAP1-204ENST00000372798 ABCA10Q8WWZ4 1543 aa19.78■□□□□ 0.76
CAP1-204ENST00000372798 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
CAP1-204ENST00000372798 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.75
CAP1-204ENST00000372798 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
CAP1-204ENST00000372798 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
CAP1-204ENST00000372798 FBLN2P98095 1184 aa19.74■□□□□ 0.75
CAP1-204ENST00000372798 GAPVD1Q14C86 1478 aa19.74■□□□□ 0.75
CAP1-204ENST00000372798 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
CAP1-204ENST00000372798 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.752e-8■■■□□ 16.7
CAP1-204ENST00000372798 SYNJ2O15056 1496 aa19.71■□□□□ 0.75
CAP1-204ENST00000372798 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
CAP1-204ENST00000372798 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
CAP1-204ENST00000372798 ARAP1Q96P48 1450 aa19.65■□□□□ 0.74
CAP1-204ENST00000372798 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
CAP1-204ENST00000372798 CYB5RLQ6IPT4 315 aa19.58■□□□□ 0.73
CAP1-204ENST00000372798 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
CAP1-204ENST00000372798 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
CAP1-204ENST00000372798 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
CAP1-204ENST00000372798 NUP160Q12769 1436 aa19.49■□□□□ 0.71
CAP1-204ENST00000372798 CEP170Q5SW79 1584 aa19.49■□□□□ 0.71
CAP1-204ENST00000372798 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
CAP1-204ENST00000372798 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
CAP1-204ENST00000372798 KIF27Q86VH2 1401 aa19.32■□□□□ 0.68
CAP1-204ENST00000372798 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
CAP1-204ENST00000372798 CUL7Q14999 1698 aa19.3■□□□□ 0.68
CAP1-204ENST00000372798 IGF1RP08069 1367 aa19.29■□□□□ 0.68
CAP1-204ENST00000372798 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms