RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 NISCHQ9Y2I1 1504 aa38.18■■■■□ 3.7
PSMB4-205ENST00000493673 CCDC180Q9P1Z9 1646 aa33.83■■■■□ 3.01
PSMB4-205ENST00000493673 ABCC9O60706 1549 aa33.26■■■□□ 2.91
PSMB4-205ENST00000493673 DCAF8L2P0C7V8 631 aa32.19■■■□□ 2.74
PSMB4-205ENST00000493673 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
PSMB4-205ENST00000493673 NACADO15069 1562 aa31.93■■■□□ 2.7
PSMB4-205ENST00000493673 ZCCHC6Q5VYS8 1495 aaKnown RBP31.75■■■□□ 2.67
PSMB4-205ENST00000493673 MYO15BQ96JP2 1530 aa31.72■■■□□ 2.67
PSMB4-205ENST00000493673 DCAF1Q9Y4B6 1507 aa31.57■■■□□ 2.64
PSMB4-205ENST00000493673 PABPN1Q86U42 306 aaKnown RBP eCLIP31.19■■■□□ 2.58
PSMB4-205ENST00000493673 UNC13AQ9UPW8 1703 aa31.01■■■□□ 2.55
PSMB4-205ENST00000493673 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
PSMB4-205ENST00000493673 BICRAQ9NZM4 1560 aa30.89■■■□□ 2.54
PSMB4-205ENST00000493673 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
PSMB4-205ENST00000493673 DNAJC5BQ9UF47 199 aa30.58■■■□□ 2.49
PSMB4-205ENST00000493673 EIF4G1Q04637 1599 aaKnown RBP30.13■■■□□ 2.41
PSMB4-205ENST00000493673 CC2D2AQ9P2K1 1620 aa30.01■■■□□ 2.39
PSMB4-205ENST00000493673 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
PSMB4-205ENST00000493673 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
PSMB4-205ENST00000493673 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
PSMB4-205ENST00000493673 NCAPD3P42695 1498 aa29.51■■■□□ 2.31
PSMB4-205ENST00000493673 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
PSMB4-205ENST00000493673 SMARCA2P51531 1590 aa29.45■■■□□ 2.31
PSMB4-205ENST00000493673 MROH2BQ7Z745 1585 aa29.4■■■□□ 2.3
PSMB4-205ENST00000493673 PEG3Q9GZU2 1588 aa29.27■■■□□ 2.28
PSMB4-205ENST00000493673 BAZ1BQ9UIG0 1483 aaKnown RBP29.27■■■□□ 2.28
PSMB4-205ENST00000493673 HMGXB3Q12766 1538 aa29.26■■■□□ 2.27
PSMB4-205ENST00000493673 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
PSMB4-205ENST00000493673 WIZO95785 1651 aa29.03■■■□□ 2.24
PSMB4-205ENST00000493673 TOP2AP11388 1531 aaKnown RBP28.77■■■□□ 2.2
PSMB4-205ENST00000493673 ERCC6Q03468 1493 aa28.73■■■□□ 2.19
PSMB4-205ENST00000493673 NESP48681 1621 aa28.73■■■□□ 2.19
PSMB4-205ENST00000493673 CADPSQ9ULU8 1353 aa28.7■■■□□ 2.18
PSMB4-205ENST00000493673 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
PSMB4-205ENST00000493673 PDS5BQ9NTI5 1447 aa28.61■■■□□ 2.17
PSMB4-205ENST00000493673 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
PSMB4-205ENST00000493673 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
PSMB4-205ENST00000493673 CFTRP13569 1480 aa28.45■■■□□ 2.15
PSMB4-205ENST00000493673 CUX2O14529 1486 aa28.38■■■□□ 2.13
PSMB4-205ENST00000493673 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
PSMB4-205ENST00000493673 KIF21AQ7Z4S6 1674 aa28.27■■■□□ 2.12
PSMB4-205ENST00000493673 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
PSMB4-205ENST00000493673 MRC2Q9UBG0 1479 aa28.22■■■□□ 2.11
PSMB4-205ENST00000493673 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
PSMB4-205ENST00000493673 WDR62O43379 1518 aa28.05■■■□□ 2.08
PSMB4-205ENST00000493673 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
PSMB4-205ENST00000493673 URB2Q14146 1524 aaKnown RBP27.96■■■□□ 2.07
PSMB4-205ENST00000493673 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
PSMB4-205ENST00000493673 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
PSMB4-205ENST00000493673 DNMBPQ6XZF7 1577 aa27.75■■■□□ 2.03
PSMB4-205ENST00000493673 IFT140Q96RY7 1462 aa27.7■■■□□ 2.03
PSMB4-205ENST00000493673 DNAJC5Q9H3Z4 198 aa27.64■■■□□ 2.02
PSMB4-205ENST00000493673 SOGA1O94964 1423 aa27.58■■■□□ 2.01
PSMB4-205ENST00000493673 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
PSMB4-205ENST00000493673 CUX1P39880 1505 aa27.57■■■□□ 2
PSMB4-205ENST00000493673 FGD5Q6ZNL6 1462 aa27.52■■■□□ 2
PSMB4-205ENST00000493673 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
PSMB4-205ENST00000493673 WRNQ14191 1432 aaPredicted RBP eCLIP27.49■■□□□ 1.99
PSMB4-205ENST00000493673 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
PSMB4-205ENST00000493673 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
PSMB4-205ENST00000493673 AQRO60306 1485 aaKnown RBP eCLIP27.43■■□□□ 1.984e-8■■■■■ 62.9
PSMB4-205ENST00000493673 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
PSMB4-205ENST00000493673 OSCARQ8IYS5 282 aa27.38■■□□□ 1.97
PSMB4-205ENST00000493673 TOP2BQ02880 1626 aa27.33■■□□□ 1.97
PSMB4-205ENST00000493673 EIF4G3O43432 1585 aaKnown RBP27.32■■□□□ 1.96
PSMB4-205ENST00000493673 SYNJ1O43426 1573 aa27.28■■□□□ 1.96
PSMB4-205ENST00000493673 FBLN2P98095 1184 aa27.27■■□□□ 1.96
PSMB4-205ENST00000493673 BIVM-ERCC5R4GMW8 1640 aa27.26■■□□□ 1.96
PSMB4-205ENST00000493673 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
PSMB4-205ENST00000493673 ABCA10Q8WWZ4 1543 aa27.26■■□□□ 1.95
PSMB4-205ENST00000493673 GRIN2BQ13224 1484 aa27.21■■□□□ 1.95
PSMB4-205ENST00000493673 GAPVD1Q14C86 1478 aa27.21■■□□□ 1.95
PSMB4-205ENST00000493673 CHMP7Q8WUX9 453 aaPredicted RBP27.18■■□□□ 1.94
PSMB4-205ENST00000493673 SNAPC4Q5SXM2 1469 aa27.12■■□□□ 1.93
PSMB4-205ENST00000493673 MAGI1Q96QZ7 1491 aaPredicted RBP27.11■■□□□ 1.93
PSMB4-205ENST00000493673 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
PSMB4-205ENST00000493673 SYNJ2O15056 1496 aa27.02■■□□□ 1.92
PSMB4-205ENST00000493673 TRIM41Q8WV44 630 aa27■■□□□ 1.91
PSMB4-205ENST00000493673 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
PSMB4-205ENST00000493673 PBRM1Q86U86 1689 aa26.96■■□□□ 1.91
PSMB4-205ENST00000493673 CHD1O14646 1710 aa26.93■■□□□ 1.9
PSMB4-205ENST00000493673 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
PSMB4-205ENST00000493673 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
PSMB4-205ENST00000493673 IGF1RP08069 1367 aa26.86■■□□□ 1.89
PSMB4-205ENST00000493673 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
PSMB4-205ENST00000493673 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
PSMB4-205ENST00000493673 ARHGEF11O15085 1522 aa26.72■■□□□ 1.87
PSMB4-205ENST00000493673 CARMIL1Q5VZK9 1371 aa26.72■■□□□ 1.87
PSMB4-205ENST00000493673 CLASP1Q7Z460 1538 aa26.7■■□□□ 1.87
PSMB4-205ENST00000493673 NUP160Q12769 1436 aa26.69■■□□□ 1.86
PSMB4-205ENST00000493673 RIMBP3CA6NJZ7 1639 aa26.67■■□□□ 1.86
PSMB4-205ENST00000493673 RIMBP3BA6NNM3 1639 aa26.67■■□□□ 1.86
PSMB4-205ENST00000493673 RIMBP3Q9UFD9 1639 aa26.67■■□□□ 1.86
PSMB4-205ENST00000493673 CYB5RLQ6IPT4 315 aa26.67■■□□□ 1.86
PSMB4-205ENST00000493673 CUL7Q14999 1698 aa26.62■■□□□ 1.85
PSMB4-205ENST00000493673 RUSC2Q8N2Y8 1516 aa26.61■■□□□ 1.85
PSMB4-205ENST00000493673 CEP170Q5SW79 1584 aa26.61■■□□□ 1.85
PSMB4-205ENST00000493673 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
PSMB4-205ENST00000493673 JPH4Q96JJ6 628 aa26.6■■□□□ 1.85
PSMB4-205ENST00000493673 CSRNP3Q8WYN3 585 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms