RNA–Protein interactions for RNA: ENST00000396825.3

FITM2-201, Transcript of fat storage inducing transmembrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FITM2, Length 4,597 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FITM2-201ENST00000396825 NISCHQ9Y2I1 1504 aa25.09■■□□□ 1.61
FITM2-201ENST00000396825 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
FITM2-201ENST00000396825 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
FITM2-201ENST00000396825 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
FITM2-201ENST00000396825 SUPT5HO00267 1087 aaKnown RBP21.18■□□□□ 0.98
FITM2-201ENST00000396825 ABCC9O60706 1549 aa21.07■□□□□ 0.96
FITM2-201ENST00000396825 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
FITM2-201ENST00000396825 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
FITM2-201ENST00000396825 NACADO15069 1562 aa20.31■□□□□ 0.84
FITM2-201ENST00000396825 SCRIBQ14160 1630 aa20.31■□□□□ 0.84
FITM2-201ENST00000396825 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
FITM2-201ENST00000396825 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
FITM2-201ENST00000396825 MYO15BQ96JP2 1530 aa20.09■□□□□ 0.81
FITM2-201ENST00000396825 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
FITM2-201ENST00000396825 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
FITM2-201ENST00000396825 FAM9AQ8IZU1 332 aaPredicted RBP19.7■□□□□ 0.74
FITM2-201ENST00000396825 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
FITM2-201ENST00000396825 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
FITM2-201ENST00000396825 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
FITM2-201ENST00000396825 BAZ1AQ9NRL2 1556 aaPredicted RBP19.51■□□□□ 0.71
FITM2-201ENST00000396825 MROH2BQ7Z745 1585 aa19.39■□□□□ 0.7
FITM2-201ENST00000396825 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
FITM2-201ENST00000396825 UBTFP17480 764 aaKnown RBP19.21■□□□□ 0.67
FITM2-201ENST00000396825 LOC105371045A0A1W2PR82 267 aa19.2■□□□□ 0.66
FITM2-201ENST00000396825 WIZO95785 1651 aa19.16■□□□□ 0.66
FITM2-201ENST00000396825 SMARCA4P51532 1647 aa19.16■□□□□ 0.66
FITM2-201ENST00000396825 SMARCA2P51531 1590 aa19.11■□□□□ 0.65
FITM2-201ENST00000396825 APLP2Q06481 763 aa19.08■□□□□ 0.65
FITM2-201ENST00000396825 RANGAP1P46060 587 aaPredicted RBP19.07■□□□□ 0.64
FITM2-201ENST00000396825 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
FITM2-201ENST00000396825 BICRAQ9NZM4 1560 aa19.03■□□□□ 0.64
FITM2-201ENST00000396825 ATAD2BQ9ULI0 1458 aa19.02■□□□□ 0.63
FITM2-201ENST00000396825 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
FITM2-201ENST00000396825 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
FITM2-201ENST00000396825 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
FITM2-201ENST00000396825 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
FITM2-201ENST00000396825 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
FITM2-201ENST00000396825 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
FITM2-201ENST00000396825 WRNQ14191 1432 aaPredicted RBP eCLIP18.84■□□□□ 0.61
FITM2-201ENST00000396825 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
FITM2-201ENST00000396825 ATP1B4Q9UN42 357 aaPredicted RBP18.73■□□□□ 0.59
FITM2-201ENST00000396825 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
FITM2-201ENST00000396825 ABCC8Q09428 1581 aa18.67■□□□□ 0.58
FITM2-201ENST00000396825 EEA1Q15075 1411 aa18.66■□□□□ 0.58
FITM2-201ENST00000396825 TRIM26Q12899 539 aaPredicted RBP18.63■□□□□ 0.57
FITM2-201ENST00000396825 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
FITM2-201ENST00000396825 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
FITM2-201ENST00000396825 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
FITM2-201ENST00000396825 CC2D2AQ9P2K1 1620 aa18.57■□□□□ 0.56
FITM2-201ENST00000396825 SOGA1O94964 1423 aa18.51■□□□□ 0.55
FITM2-201ENST00000396825 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
FITM2-201ENST00000396825 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
FITM2-201ENST00000396825 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
FITM2-201ENST00000396825 FBLN2P98095 1184 aa18.42■□□□□ 0.54
FITM2-201ENST00000396825 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
FITM2-201ENST00000396825 CEP164Q9UPV0 1460 aa18.4■□□□□ 0.54
FITM2-201ENST00000396825 CFTRP13569 1480 aa18.39■□□□□ 0.53
FITM2-201ENST00000396825 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
FITM2-201ENST00000396825 CUX2O14529 1486 aa18.36■□□□□ 0.53
FITM2-201ENST00000396825 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
FITM2-201ENST00000396825 CCER1Q8TC90 406 aaPredicted RBP18.33■□□□□ 0.53
FITM2-201ENST00000396825 P3H3Q8IVL6 736 aa18.33■□□□□ 0.52
FITM2-201ENST00000396825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.52
FITM2-201ENST00000396825 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
FITM2-201ENST00000396825 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
FITM2-201ENST00000396825 CLIP1P30622 1438 aa18.31■□□□□ 0.52
FITM2-201ENST00000396825 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
FITM2-201ENST00000396825 CARMIL1Q5VZK9 1371 aa18.24■□□□□ 0.51
FITM2-201ENST00000396825 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
FITM2-201ENST00000396825 NESP48681 1621 aa18.22■□□□□ 0.51
FITM2-201ENST00000396825 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
FITM2-201ENST00000396825 ITGAEP38570 1179 aa18.2■□□□□ 0.5
FITM2-201ENST00000396825 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
FITM2-201ENST00000396825 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
FITM2-201ENST00000396825 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
FITM2-201ENST00000396825 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
FITM2-201ENST00000396825 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
FITM2-201ENST00000396825 HRCP23327 699 aa18.11■□□□□ 0.49
FITM2-201ENST00000396825 CUX1P39880 1505 aa18.1■□□□□ 0.49
FITM2-201ENST00000396825 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
FITM2-201ENST00000396825 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.48
FITM2-201ENST00000396825 FAM50AQ14320 339 aaKnown RBP18.07■□□□□ 0.48
FITM2-201ENST00000396825 RAD54L2Q9Y4B4 1467 aa18.06■□□□□ 0.48
FITM2-201ENST00000396825 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
FITM2-201ENST00000396825 TOPBP1Q92547 1522 aa18.02■□□□□ 0.48
FITM2-201ENST00000396825 IGF1RP08069 1367 aa18.01■□□□□ 0.47
FITM2-201ENST00000396825 DNMBPQ6XZF7 1577 aa17.98■□□□□ 0.47
FITM2-201ENST00000396825 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
FITM2-201ENST00000396825 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.47
FITM2-201ENST00000396825 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
FITM2-201ENST00000396825 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
FITM2-201ENST00000396825 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
FITM2-201ENST00000396825 KIF21BO75037 1637 aa17.91■□□□□ 0.46
FITM2-201ENST00000396825 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
FITM2-201ENST00000396825 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
FITM2-201ENST00000396825 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
FITM2-201ENST00000396825 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
FITM2-201ENST00000396825 PRXQ9BXM0 1461 aa17.85■□□□□ 0.45
FITM2-201ENST00000396825 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.45
FITM2-201ENST00000396825 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms