Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.075e-10■■■■□ 26.2
RPS3P23396 PCCB-212ENST00000474833 921 ntTSL 513.95□□□□□ -0.181e-6■■■■□ 26.2
RPS3P23396 PGC-201ENST00000356667 480 ntTSL 510.05□□□□□ -0.85e-12■■■■□ 26.2
RPS3P23396 C2-207ENST00000447952 837 ntTSL 312.9□□□□□ -0.341e-8■■■■□ 26.2
RPS3P23396 APRT-210ENST00000568575 490 ntTSL 212.45□□□□□ -0.424e-10■■■■□ 26.1
RPS3P23396 APRT-206ENST00000567057 437 ntTSL 210.41□□□□□ -0.744e-10■■■■□ 26.1
RPS3P23396 PGC-203ENST00000415707 399 ntTSL 56.4□□□□□ -1.381e-19■■■■□ 26.1
RPS3P23396 CLSTN3-215ENST00000544584 546 ntTSL 45.46□□□□□ -1.543e-13■■■■□ 26.1
RPS3P23396 APEX1-204ENST00000553368 304 ntTSL 314.34□□□□□ -0.112e-6■■■■□ 26.1
RPS3P23396 APEX1-207ENST00000554325 568 ntTSL 512.49□□□□□ -0.412e-6■■■■□ 26.1
RPS3P23396 APEX1-217ENST00000557181 566 ntTSL 312.49□□□□□ -0.412e-6■■■■□ 26.1
RPS3P23396 APEX1-213ENST00000556296 571 ntTSL 412.42□□□□□ -0.422e-6■■■■□ 26.1
RPS3P23396 APEX1-209ENST00000555306 898 ntTSL 511.91□□□□□ -0.51e-6■■■■□ 26.1
RPS3P23396 APEX1-218ENST00000557344 671 ntTSL 29.68□□□□□ -0.861e-6■■■■□ 26.1
RPS3P23396 EIF2S1-203ENST00000554332 534 ntTSL 22.39□□□□□ -2.032e-7■■■■□ 26.1
RPS3P23396 EFTUD2-217ENST00000590124 899 ntTSL 319.35■□□□□ 0.692e-7■■■■□ 26.1
RPS3P23396 EFTUD2-214ENST00000589769 689 ntTSL 315.1■□□□□ 0.012e-7■■■■□ 26.1
RPS3P23396 EFTUD2-219ENST00000590977 2422 ntTSL 29.17□□□□□ -0.942e-7■■■■□ 26.1
RPS3P23396 EFTUD2-205ENST00000586276 3678 ntTSL 28.2□□□□□ -1.12e-7■■■■□ 26.1
RPS3P23396 COPG1-210ENST00000515725 3231 ntTSL 28.79□□□□□ -15e-7■■■■□ 26.1
RPS3P23396 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.065e-7■■■■□ 26.1
RPS3P23396 FARSA-205ENST00000587488 514 ntTSL 313.58□□□□□ -0.244e-7■■■■□ 26.1
RPS3P23396 NDUFA7-202ENST00000593729 569 ntTSL 215.04■□□□□ -04e-7■■■■□ 26.1
RPS3P23396 NDUFA7-204ENST00000601101 414 ntTSL 414.69□□□□□ -0.064e-7■■■■□ 26.1
RPS3P23396 NDUFA7-206ENST00000602059 528 ntTSL 412.16□□□□□ -0.464e-7■■■■□ 26.1
RPS3P23396 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.554e-7■■■■□ 26.1
RPS3P23396 NDUFA7-205ENST00000601258 547 ntTSL 210.28□□□□□ -0.764e-7■■■■□ 26.1
RPS3P23396 NDUFA7-203ENST00000595856 553 ntTSL 59.67□□□□□ -0.864e-7■■■■□ 26.1
RPS3P23396 GALK1-206ENST00000589030 866 ntTSL 219.34■□□□□ 0.697e-7■■■■□ 26.1
RPS3P23396 GALK1-202ENST00000586244 1180 ntTSL 1 (best)18.65■□□□□ 0.587e-7■■■■□ 26.1
RPS3P23396 FBXL3-204ENST00000472949 329 ntTSL 526■■□□□ 1.758e-9■■■■□ 26.1
RPS3P23396 FBXL3-202ENST00000417323 1093 ntTSL 525.97■■□□□ 1.758e-9■■■■□ 26.1
RPS3P23396 KEAP1-207ENST00000591039 960 ntTSL 322.35■■□□□ 1.178e-9■■■■□ 26.1
RPS3P23396 KEAP1-208ENST00000591419 986 ntTSL 320.86■□□□□ 0.938e-9■■■■□ 26.1
RPS3P23396 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.868e-9■■■■□ 26.1
RPS3P23396 MRPS23-203ENST00000579380 516 ntTSL 318.98■□□□□ 0.638e-9■■■■□ 26.1
RPS3P23396 KEAP1-203ENST00000585845 774 ntTSL 518.87■□□□□ 0.618e-9■■■■□ 26.1
RPS3P23396 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.448e-9■■■■□ 26.1
RPS3P23396 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.04■□□□□ 0.328e-9■■■■□ 26.1
RPS3P23396 KEAP1-209ENST00000592055 979 ntTSL 316.99■□□□□ 0.318e-9■■■■□ 26.1
RPS3P23396 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.69■□□□□ 0.268e-9■■■■□ 26.1
RPS3P23396 MRPS23-204ENST00000579768 706 ntTSL 1 (best)15.88■□□□□ 0.138e-9■■■■□ 26.1
RPS3P23396 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.138e-9■■■■□ 26.1
RPS3P23396 KRT19-203ENST00000462611 504 ntTSL 215.84■□□□□ 0.131e-16■■■■□ 26.1
RPS3P23396 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.98□□□□□ -0.018e-9■■■■□ 26.1
RPS3P23396 PSMC3-202ENST00000524447 935 ntTSL 314.82□□□□□ -0.049e-7■■■■□ 26.1
RPS3P23396 ITPA-206ENST00000461029 378 ntTSL 514.33□□□□□ -0.121e-12■■■■□ 26.1
RPS3P23396 CCT5-207ENST00000509846 546 ntTSL 28.77□□□□□ -1.011e-16■■■■□ 26.1
RPS3P23396 EEF1E1-204ENST00000502429 591 ntTSL 38.44□□□□□ -1.068e-9■■■■□ 26.1
RPS3P23396 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.078e-9■■■■□ 26.1
RPS3P23396 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.138e-9■■■■□ 26.1
RPS3P23396 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.235e-8■■■■□ 26.1
RPS3P23396 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.395e-8■■■■□ 26.1
RPS3P23396 WDR83OS-203ENST00000598732 627 ntTSL 211.79□□□□□ -0.525e-8■■■■□ 26.1
RPS3P23396 WDR83OS-201ENST00000222190 599 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.745e-8■■■■□ 26.1
RPS3P23396 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.054e-7■■■■□ 26.1
RPS3P23396 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.87■■□□□ 1.097e-10■■■■□ 26.1
RPS3P23396 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61e-6■■■■□ 26.1
RPS3P23396 VWCE-201ENST00000301770 3368 ntTSL 1 (best)13.99□□□□□ -0.172e-7■■■■□ 26.1
RPS3P23396 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.182e-7■■■■□ 26.1
RPS3P23396 LSR-206ENST00000597446 478 ntTSL 315.57■□□□□ 0.082e-10■■■■□ 26.1
RPS3P23396 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.571e-6■■■■□ 26.1
RPS3P23396 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.051e-6■■■■□ 26.1
RPS3P23396 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.411e-6■■■■□ 26.1
RPS3P23396 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.181e-6■■■■□ 26.1
RPS3P23396 SRPRB-204ENST00000484684 512 ntTSL 214.83□□□□□ -0.042e-12■■■■□ 26.1
RPS3P23396 UPF1-212ENST00000601689 561 ntTSL 418.89■□□□□ 0.613e-8■■■■□ 26.1
RPS3P23396 VAT1-208ENST00000590924 613 ntTSL 317.45■□□□□ 0.383e-7■■■■□ 26.1
RPS3P23396 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC12.97□□□□□ -0.334e-7■■■■□ 26.1
RPS3P23396 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.39□□□□□ -0.434e-7■■■■□ 26.1
RPS3P23396 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.474e-7■■■■□ 26.1
RPS3P23396 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC9.08□□□□□ -0.964e-7■■■■□ 26.1
RPS3P23396 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC8.7□□□□□ -1.024e-7■■■■□ 26.1
RPS3P23396 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.15□□□□□ -1.114e-7■■■■□ 26.1
RPS3P23396 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.334e-7■■■■□ 26.1
RPS3P23396 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.59□□□□□ -1.354e-7■■■■□ 26.1
RPS3P23396 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.93□□□□□ -1.464e-7■■■■□ 26.1
RPS3P23396 NDUFS2-210ENST00000480762 951 ntTSL 512.12□□□□□ -0.473e-10■■■■□ 26
RPS3P23396 SERPINH1-206ENST00000526242 474 ntTSL 417.71■□□□□ 0.432e-8■■■■□ 26
RPS3P23396 TIMM17B-207ENST00000490755 666 ntTSL 518.4■□□□□ 0.543e-8■■■■□ 26
RPS3P23396 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.622e-8■■■■□ 26
RPS3P23396 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.44■□□□□ 0.223e-8■■■■□ 26
RPS3P23396 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.39■□□□□ 0.213e-8■■■■□ 26
RPS3P23396 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.153e-8■■■■□ 26
RPS3P23396 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.87□□□□□ -0.033e-8■■■■□ 26
RPS3P23396 HMBS-207ENST00000536185 441 ntTSL 315.65■□□□□ 0.19e-7■■■■□ 26
RPS3P23396 HMBS-208ENST00000536813 507 ntTSL 315.43■□□□□ 0.069e-7■■■■□ 26
RPS3P23396 F11R-201ENST00000335772 571 ntTSL 414.72□□□□□ -0.058e-8■■■■□ 26
RPS3P23396 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.41□□□□□ -0.11e-8■■■■□ 26
RPS3P23396 C2-208ENST00000452202 539 ntTSL 411.77□□□□□ -0.531e-8■■■■□ 26
RPS3P23396 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.818e-14■■■■□ 26
RPS3P23396 ETFB-203ENST00000593992 603 ntTSL 215.2■□□□□ 0.028e-14■■■■□ 26
RPS3P23396 MDH1-205ENST00000432309 844 ntTSL 58.69□□□□□ -1.021e-7■■■■□ 26
RPS3P23396 MDH1-204ENST00000421012 573 ntTSL 41.82□□□□□ -2.121e-7■■■■□ 26
RPS3P23396 CD63-213ENST00000552164 845 ntTSL 218.39■□□□□ 0.535e-8■■■■□ 26
RPS3P23396 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.254e-7■■■■□ 26
RPS3P23396 EBP-201ENST00000276096 904 ntTSL 215.23■□□□□ 0.032e-7■■■■□ 26
RPS3P23396 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.092e-7■■■■□ 26
RPS3P23396 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.611e-6■■■■□ 26
RPS3P23396 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.49□□□□□ -2.171e-6■■■■□ 26
Retrieved 100 of 24,271 protein–RNA pairs in 281.8 ms