RNA–Protein interactions for RNA: ENST00000579768.1

MRPS23-204, Transcript of mitochondrial ribosomal protein S23, humanhuman

TSL 1 (best)

Gene MRPS23, Length 706 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS23-204ENST00000579768 NISCHQ9Y2I1 1504 aa41.46■■■■■ 4.23
MRPS23-204ENST00000579768 ABCC9O60706 1549 aa37.15■■■■□ 3.54
MRPS23-204ENST00000579768 CCDC180Q9P1Z9 1646 aa37.1■■■■□ 3.53
MRPS23-204ENST00000579768 RB1CC1Q8TDY2 1594 aa35.31■■■■□ 3.24
MRPS23-204ENST00000579768 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
MRPS23-204ENST00000579768 NACADO15069 1562 aa35.06■■■■□ 3.2
MRPS23-204ENST00000579768 DNAJC5BQ9UF47 199 aa34.76■■■■□ 3.16
MRPS23-204ENST00000579768 PABPN1Q86U42 306 aaKnown RBP eCLIP34.65■■■■□ 3.14
MRPS23-204ENST00000579768 MYO15BQ96JP2 1530 aa34.55■■■■□ 3.12
MRPS23-204ENST00000579768 UNC13AQ9UPW8 1703 aa34.54■■■■□ 3.12
MRPS23-204ENST00000579768 ZCCHC6Q5VYS8 1495 aaKnown RBP34.39■■■■□ 3.1
MRPS23-204ENST00000579768 BICRAQ9NZM4 1560 aa34.31■■■■□ 3.08
MRPS23-204ENST00000579768 DCAF1Q9Y4B6 1507 aa34.18■■■■□ 3.06
MRPS23-204ENST00000579768 SCRIBQ14160 1630 aa33.96■■■■□ 3.03
MRPS23-204ENST00000579768 SHROOM4Q9ULL8 1493 aa33.74■■■□□ 2.99
MRPS23-204ENST00000579768 CC2D2AQ9P2K1 1620 aa33.52■■■□□ 2.96
MRPS23-204ENST00000579768 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
MRPS23-204ENST00000579768 CECR2Q9BXF3 1484 aa33.42■■■□□ 2.94
MRPS23-204ENST00000579768 NCAPD3P42695 1498 aa32.37■■■□□ 2.77
MRPS23-204ENST00000579768 ATAD2BQ9ULI0 1458 aa32.34■■■□□ 2.77
MRPS23-204ENST00000579768 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
MRPS23-204ENST00000579768 SMARCA2P51531 1590 aa32.22■■■□□ 2.75
MRPS23-204ENST00000579768 BAZ1AQ9NRL2 1556 aaPredicted RBP32.16■■■□□ 2.74
MRPS23-204ENST00000579768 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
MRPS23-204ENST00000579768 ERCC6Q03468 1493 aa32.05■■■□□ 2.72
MRPS23-204ENST00000579768 BAZ1BQ9UIG0 1483 aaKnown RBP32.05■■■□□ 2.72
MRPS23-204ENST00000579768 MROH2BQ7Z745 1585 aa32■■■□□ 2.71
MRPS23-204ENST00000579768 NESP48681 1621 aa31.96■■■□□ 2.71
MRPS23-204ENST00000579768 PEG3Q9GZU2 1588 aa31.95■■■□□ 2.71
MRPS23-204ENST00000579768 CUX2O14529 1486 aa31.86■■■□□ 2.69
MRPS23-204ENST00000579768 DNAJC5Q9H3Z4 198 aa31.77■■■□□ 2.68
MRPS23-204ENST00000579768 LAMC3Q9Y6N6 1575 aa31.64■■■□□ 2.65
MRPS23-204ENST00000579768 WIZO95785 1651 aa31.63■■■□□ 2.65
MRPS23-204ENST00000579768 THOC2Q8NI27 1593 aaKnown RBP31.54■■■□□ 2.64
MRPS23-204ENST00000579768 KIF21AQ7Z4S6 1674 aa31.51■■■□□ 2.63
MRPS23-204ENST00000579768 PDS5BQ9NTI5 1447 aa31.47■■■□□ 2.63
MRPS23-204ENST00000579768 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
MRPS23-204ENST00000579768 RSF1Q96T23 1441 aaPredicted RBP31.36■■■□□ 2.61
MRPS23-204ENST00000579768 MRC2Q9UBG0 1479 aa31.22■■■□□ 2.59
MRPS23-204ENST00000579768 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
MRPS23-204ENST00000579768 CEP164Q9UPV0 1460 aa31.12■■■□□ 2.57
MRPS23-204ENST00000579768 WDR62O43379 1518 aa31.12■■■□□ 2.57
MRPS23-204ENST00000579768 FANCD2Q9BXW9 1451 aa31.11■■■□□ 2.57
MRPS23-204ENST00000579768 CFTRP13569 1480 aa31.08■■■□□ 2.57
MRPS23-204ENST00000579768 CCDC88BA6NC98 1476 aa30.87■■■□□ 2.53
MRPS23-204ENST00000579768 URB2Q14146 1524 aaKnown RBP30.86■■■□□ 2.53
MRPS23-204ENST00000579768 PRDM2Q13029 1718 aa30.76■■■□□ 2.51
MRPS23-204ENST00000579768 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
MRPS23-204ENST00000579768 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
MRPS23-204ENST00000579768 ZNF608Q9ULD9 1512 aaPredicted RBP30.49■■■□□ 2.47
MRPS23-204ENST00000579768 IFT140Q96RY7 1462 aa30.47■■■□□ 2.47
MRPS23-204ENST00000579768 OSCARQ8IYS5 282 aa30.47■■■□□ 2.47
MRPS23-204ENST00000579768 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
MRPS23-204ENST00000579768 ABCC8Q09428 1581 aa30.38■■■□□ 2.45
MRPS23-204ENST00000579768 EIF4G3O43432 1585 aaKnown RBP30.29■■■□□ 2.44
MRPS23-204ENST00000579768 TARBP1Q13395 1621 aaKnown RBP30.23■■■□□ 2.43
MRPS23-204ENST00000579768 AQRO60306 1485 aaKnown RBP eCLIP30.22■■■□□ 2.43
MRPS23-204ENST00000579768 POLA1P09884 1462 aaPredicted RBP30.22■■■□□ 2.43
MRPS23-204ENST00000579768 RAD54L2Q9Y4B4 1467 aa30.16■■■□□ 2.42
MRPS23-204ENST00000579768 SUPT5HO00267 1087 aaKnown RBP30.15■■■□□ 2.42
MRPS23-204ENST00000579768 RIMBP3CA6NJZ7 1639 aa30.09■■■□□ 2.41
MRPS23-204ENST00000579768 RIMBP3BA6NNM3 1639 aa30.09■■■□□ 2.41
MRPS23-204ENST00000579768 RIMBP3Q9UFD9 1639 aa30.09■■■□□ 2.41
MRPS23-204ENST00000579768 SOGA1O94964 1423 aa30.08■■■□□ 2.41
MRPS23-204ENST00000579768 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
MRPS23-204ENST00000579768 TDRD9Q8NDG6 1382 aaKnown RBP30.06■■■□□ 2.4
MRPS23-204ENST00000579768 CUX1P39880 1505 aa30.06■■■□□ 2.4
MRPS23-204ENST00000579768 CHD1O14646 1710 aa30.05■■■□□ 2.4
MRPS23-204ENST00000579768 FBLN2P98095 1184 aa30.04■■■□□ 2.4
MRPS23-204ENST00000579768 ARHGEF11O15085 1522 aa30.01■■■□□ 2.39
MRPS23-204ENST00000579768 SNAPC4Q5SXM2 1469 aa29.91■■■□□ 2.38
MRPS23-204ENST00000579768 WDR97A6NE52 1622 aa29.84■■■□□ 2.37
MRPS23-204ENST00000579768 CYB5RLQ6IPT4 315 aa29.82■■■□□ 2.36
MRPS23-204ENST00000579768 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
MRPS23-204ENST00000579768 CHMP7Q8WUX9 453 aaPredicted RBP29.78■■■□□ 2.36
MRPS23-204ENST00000579768 MAGI1Q96QZ7 1491 aaPredicted RBP29.76■■■□□ 2.35
MRPS23-204ENST00000579768 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
MRPS23-204ENST00000579768 GAPVD1Q14C86 1478 aa29.72■■■□□ 2.35
MRPS23-204ENST00000579768 PBRM1Q86U86 1689 aa29.7■■■□□ 2.35
MRPS23-204ENST00000579768 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
MRPS23-204ENST00000579768 CLASP1Q7Z460 1538 aa29.68■■■□□ 2.34
MRPS23-204ENST00000579768 ABCA10Q8WWZ4 1543 aa29.68■■■□□ 2.34
MRPS23-204ENST00000579768 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
MRPS23-204ENST00000579768 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
MRPS23-204ENST00000579768 WRNQ14191 1432 aaPredicted RBP eCLIP29.6■■■□□ 2.33
MRPS23-204ENST00000579768 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
MRPS23-204ENST00000579768 BIVM-ERCC5R4GMW8 1640 aa29.55■■■□□ 2.32
MRPS23-204ENST00000579768 TRHP20396 242 aaPredicted RBP29.47■■■□□ 2.31
MRPS23-204ENST00000579768 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
MRPS23-204ENST00000579768 GRIN2AQ12879 1464 aa29.42■■■□□ 2.3
MRPS23-204ENST00000579768 CEP170Q5SW79 1584 aa29.34■■■□□ 2.29
MRPS23-204ENST00000579768 FHAD1B1AJZ9 1412 aa29.33■■■□□ 2.29
MRPS23-204ENST00000579768 NUP160Q12769 1436 aa29.3■■■□□ 2.28
MRPS23-204ENST00000579768 ERCC6L2Q5T890 1561 aa29.3■■■□□ 2.28
MRPS23-204ENST00000579768 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
MRPS23-204ENST00000579768 SHROOM2Q13796 1616 aa29.14■■■□□ 2.26
MRPS23-204ENST00000579768 PRG4Q92954 1404 aaPredicted RBP29.06■■■□□ 2.24
MRPS23-204ENST00000579768 JPH4Q96JJ6 628 aa29.02■■■□□ 2.24
MRPS23-204ENST00000579768 RUSC2Q8N2Y8 1516 aa29.01■■■□□ 2.23
MRPS23-204ENST00000579768 KIF27Q86VH2 1401 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms