RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 NISCHQ9Y2I1 1504 aa39.8■■■■□ 3.96
CDC42EP4-209ENST00000630622 CCDC180Q9P1Z9 1646 aa35.22■■■■□ 3.23
CDC42EP4-209ENST00000630622 ABCC9O60706 1549 aa33.99■■■■□ 3.03
CDC42EP4-209ENST00000630622 ZCCHC6Q5VYS8 1495 aaKnown RBP33.25■■■□□ 2.91
CDC42EP4-209ENST00000630622 NACADO15069 1562 aa32.98■■■□□ 2.87
CDC42EP4-209ENST00000630622 DCAF1Q9Y4B6 1507 aa32.96■■■□□ 2.87
CDC42EP4-209ENST00000630622 DCAF8L2P0C7V8 631 aa32.95■■■□□ 2.87
CDC42EP4-209ENST00000630622 MYO15BQ96JP2 1530 aa32.93■■■□□ 2.86
CDC42EP4-209ENST00000630622 RB1CC1Q8TDY2 1594 aa32.89■■■□□ 2.86
CDC42EP4-209ENST00000630622 UNC13AQ9UPW8 1703 aa32.23■■■□□ 2.75
CDC42EP4-209ENST00000630622 SCRIBQ14160 1630 aa32.14■■■□□ 2.74
CDC42EP4-209ENST00000630622 BICRAQ9NZM4 1560 aa31.94■■■□□ 2.7
CDC42EP4-209ENST00000630622 PABPN1Q86U42 306 aaKnown RBP eCLIP31.8■■■□□ 2.68
CDC42EP4-209ENST00000630622 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
CDC42EP4-209ENST00000630622 EIF4G1Q04637 1599 aaKnown RBP31.02■■■□□ 2.56
CDC42EP4-209ENST00000630622 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.55
CDC42EP4-209ENST00000630622 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
CDC42EP4-209ENST00000630622 SMARCA4P51532 1647 aa30.8■■■□□ 2.52
CDC42EP4-209ENST00000630622 BAZ1AQ9NRL2 1556 aaPredicted RBP30.8■■■□□ 2.52
CDC42EP4-209ENST00000630622 CC2D2AQ9P2K1 1620 aa30.79■■■□□ 2.52
CDC42EP4-209ENST00000630622 MROH2BQ7Z745 1585 aa30.69■■■□□ 2.5
CDC42EP4-209ENST00000630622 ATAD2BQ9ULI0 1458 aa30.5■■■□□ 2.47
CDC42EP4-209ENST00000630622 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
CDC42EP4-209ENST00000630622 RSF1Q96T23 1441 aaPredicted RBP30.48■■■□□ 2.47
CDC42EP4-209ENST00000630622 SMARCA2P51531 1590 aa30.48■■■□□ 2.47
CDC42EP4-209ENST00000630622 NCAPD3P42695 1498 aa30.42■■■□□ 2.46
CDC42EP4-209ENST00000630622 WIZO95785 1651 aa30.39■■■□□ 2.45
CDC42EP4-209ENST00000630622 HMGXB3Q12766 1538 aa30.32■■■□□ 2.44
CDC42EP4-209ENST00000630622 BAZ1BQ9UIG0 1483 aaKnown RBP30.25■■■□□ 2.43
CDC42EP4-209ENST00000630622 TOP2AP11388 1531 aaKnown RBP30.07■■■□□ 2.4
CDC42EP4-209ENST00000630622 SUPT5HO00267 1087 aaKnown RBP29.96■■■□□ 2.39
CDC42EP4-209ENST00000630622 CCDC88BA6NC98 1476 aa29.71■■■□□ 2.35
CDC42EP4-209ENST00000630622 NESP48681 1621 aa29.56■■■□□ 2.32
CDC42EP4-209ENST00000630622 LAMC3Q9Y6N6 1575 aa29.55■■■□□ 2.32
CDC42EP4-209ENST00000630622 CADPSQ9ULU8 1353 aa29.53■■■□□ 2.32
CDC42EP4-209ENST00000630622 CFTRP13569 1480 aa29.48■■■□□ 2.31
CDC42EP4-209ENST00000630622 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
CDC42EP4-209ENST00000630622 PDS5BQ9NTI5 1447 aa29.29■■■□□ 2.28
CDC42EP4-209ENST00000630622 KIF21AQ7Z4S6 1674 aa29.25■■■□□ 2.27
CDC42EP4-209ENST00000630622 ERCC6Q03468 1493 aa29.22■■■□□ 2.27
CDC42EP4-209ENST00000630622 FANCD2Q9BXW9 1451 aa29.2■■■□□ 2.26
CDC42EP4-209ENST00000630622 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
CDC42EP4-209ENST00000630622 THOC2Q8NI27 1593 aaKnown RBP29.05■■■□□ 2.24
CDC42EP4-209ENST00000630622 MRC2Q9UBG0 1479 aa28.99■■■□□ 2.23
CDC42EP4-209ENST00000630622 WDR62O43379 1518 aa28.91■■■□□ 2.22
CDC42EP4-209ENST00000630622 URB2Q14146 1524 aaKnown RBP28.91■■■□□ 2.22
CDC42EP4-209ENST00000630622 DNMBPQ6XZF7 1577 aa28.81■■■□□ 2.2
CDC42EP4-209ENST00000630622 TOPBP1Q92547 1522 aa28.81■■■□□ 2.2
CDC42EP4-209ENST00000630622 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
CDC42EP4-209ENST00000630622 CUX2O14529 1486 aa28.78■■■□□ 2.2
CDC42EP4-209ENST00000630622 CUX1P39880 1505 aa28.77■■■□□ 2.2
CDC42EP4-209ENST00000630622 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
CDC42EP4-209ENST00000630622 SYNJ1O43426 1573 aa28.66■■■□□ 2.18
CDC42EP4-209ENST00000630622 BIVM-ERCC5R4GMW8 1640 aa28.65■■■□□ 2.18
CDC42EP4-209ENST00000630622 TOP2BQ02880 1626 aa28.63■■■□□ 2.17
CDC42EP4-209ENST00000630622 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
CDC42EP4-209ENST00000630622 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
CDC42EP4-209ENST00000630622 TARBP1Q13395 1621 aaKnown RBP28.49■■■□□ 2.15
CDC42EP4-209ENST00000630622 IFT140Q96RY7 1462 aa28.48■■■□□ 2.15
CDC42EP4-209ENST00000630622 RAD54L2Q9Y4B4 1467 aa28.45■■■□□ 2.14
CDC42EP4-209ENST00000630622 SOGA1O94964 1423 aa28.44■■■□□ 2.14
CDC42EP4-209ENST00000630622 WDR97A6NE52 1622 aa28.39■■■□□ 2.13
CDC42EP4-209ENST00000630622 ZNF608Q9ULD9 1512 aaPredicted RBP28.34■■■□□ 2.13
CDC42EP4-209ENST00000630622 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
CDC42EP4-209ENST00000630622 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
CDC42EP4-209ENST00000630622 EIF4G3O43432 1585 aaKnown RBP28.27■■■□□ 2.12
CDC42EP4-209ENST00000630622 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
CDC42EP4-209ENST00000630622 TDRD9Q8NDG6 1382 aaKnown RBP28.23■■■□□ 2.11
CDC42EP4-209ENST00000630622 AQRO60306 1485 aaKnown RBP eCLIP28.22■■■□□ 2.11
CDC42EP4-209ENST00000630622 ABCA5Q8WWZ7 1642 aa28.21■■■□□ 2.11
CDC42EP4-209ENST00000630622 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
CDC42EP4-209ENST00000630622 PBRM1Q86U86 1689 aa28.1■■■□□ 2.09
CDC42EP4-209ENST00000630622 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
CDC42EP4-209ENST00000630622 KIF27Q86VH2 1401 aa28.06■■■□□ 2.08
CDC42EP4-209ENST00000630622 ERICH3Q5RHP9 1530 aa28■■■□□ 2.07
CDC42EP4-209ENST00000630622 RUSC2Q8N2Y8 1516 aa27.98■■■□□ 2.07
CDC42EP4-209ENST00000630622 SNAPC4Q5SXM2 1469 aa27.98■■■□□ 2.07
CDC42EP4-209ENST00000630622 MAGI1Q96QZ7 1491 aaPredicted RBP27.96■■■□□ 2.07
CDC42EP4-209ENST00000630622 IGF1RP08069 1367 aa27.91■■■□□ 2.06
CDC42EP4-209ENST00000630622 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
CDC42EP4-209ENST00000630622 CHD1O14646 1710 aa27.84■■■□□ 2.05
CDC42EP4-209ENST00000630622 SYNJ2O15056 1496 aa27.84■■■□□ 2.05
CDC42EP4-209ENST00000630622 CUL7Q14999 1698 aa27.84■■■□□ 2.05
CDC42EP4-209ENST00000630622 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
CDC42EP4-209ENST00000630622 EEA1Q15075 1411 aa27.82■■■□□ 2.04
CDC42EP4-209ENST00000630622 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
CDC42EP4-209ENST00000630622 CARMIL1Q5VZK9 1371 aa27.73■■■□□ 2.03
CDC42EP4-209ENST00000630622 GRIN2AQ12879 1464 aa27.73■■■□□ 2.03
CDC42EP4-209ENST00000630622 FBLN2P98095 1184 aa27.73■■■□□ 2.03
CDC42EP4-209ENST00000630622 CSRNP3Q8WYN3 585 aa27.69■■■□□ 2.02
CDC42EP4-209ENST00000630622 FAM9AQ8IZU1 332 aaPredicted RBP27.68■■■□□ 2.02
CDC42EP4-209ENST00000630622 PRXQ9BXM0 1461 aa27.67■■■□□ 2.02
CDC42EP4-209ENST00000630622 OSCARQ8IYS5 282 aa27.63■■■□□ 2.01
CDC42EP4-209ENST00000630622 RAPGEF2Q9Y4G8 1499 aa27.63■■■□□ 2.01
CDC42EP4-209ENST00000630622 NUP160Q12769 1436 aa27.6■■■□□ 2.01
CDC42EP4-209ENST00000630622 CEP170Q5SW79 1584 aa27.59■■■□□ 2.01
CDC42EP4-209ENST00000630622 CLASP1Q7Z460 1538 aa27.55■■■□□ 2
CDC42EP4-209ENST00000630622 KIF21BO75037 1637 aa27.54■■■□□ 2
CDC42EP4-209ENST00000630622 KIAA0586Q9BVV6 1533 aa27.42■■□□□ 1.98
CDC42EP4-209ENST00000630622 CTTNBP2Q8WZ74 1663 aa27.4■■□□□ 1.98
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