RNA–Protein interactions for RNA: ENST00000525566.5

TXNRD1-208, Transcript of thioredoxin reductase 1, humanhuman

TSL 1 (best) BASIC

Gene TXNRD1, Length 3,836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNRD1-208ENST00000525566 NISCHQ9Y2I1 1504 aa18.88■□□□□ 0.61
TXNRD1-208ENST00000525566 CCDC180Q9P1Z9 1646 aa16.15■□□□□ 0.18
TXNRD1-208ENST00000525566 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
TXNRD1-208ENST00000525566 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
TXNRD1-208ENST00000525566 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
TXNRD1-208ENST00000525566 SUPT5HO00267 1087 aaKnown RBP15.55■□□□□ 0.08
TXNRD1-208ENST00000525566 DCAF1Q9Y4B6 1507 aa15.49■□□□□ 0.07
TXNRD1-208ENST00000525566 ABCC9O60706 1549 aa15.23■□□□□ 0.03
TXNRD1-208ENST00000525566 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
TXNRD1-208ENST00000525566 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
TXNRD1-208ENST00000525566 NACADO15069 1562 aa15.02■□□□□ -0
TXNRD1-208ENST00000525566 CHIC1Q5VXU3 224 aa14.97□□□□□ -0.01
TXNRD1-208ENST00000525566 RSF1Q96T23 1441 aaPredicted RBP14.85□□□□□ -0.03
TXNRD1-208ENST00000525566 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
TXNRD1-208ENST00000525566 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
TXNRD1-208ENST00000525566 MROH2BQ7Z745 1585 aa14.66□□□□□ -0.06
TXNRD1-208ENST00000525566 WIZO95785 1651 aa14.56□□□□□ -0.08
TXNRD1-208ENST00000525566 UNC13AQ9UPW8 1703 aa14.54□□□□□ -0.08
TXNRD1-208ENST00000525566 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
TXNRD1-208ENST00000525566 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
TXNRD1-208ENST00000525566 LOC105371045A0A1W2PR82 267 aa14.52□□□□□ -0.09
TXNRD1-208ENST00000525566 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
TXNRD1-208ENST00000525566 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
TXNRD1-208ENST00000525566 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
TXNRD1-208ENST00000525566 FAM9AQ8IZU1 332 aaPredicted RBP14.38□□□□□ -0.11
TXNRD1-208ENST00000525566 TOP2AP11388 1531 aaKnown RBP14.34□□□□□ -0.11
TXNRD1-208ENST00000525566 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
TXNRD1-208ENST00000525566 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.13
TXNRD1-208ENST00000525566 PCGF6Q9BYE7 350 aa14.26□□□□□ -0.13
TXNRD1-208ENST00000525566 SMARCA2P51531 1590 aa14.24□□□□□ -0.13
TXNRD1-208ENST00000525566 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
TXNRD1-208ENST00000525566 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
TXNRD1-208ENST00000525566 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
TXNRD1-208ENST00000525566 ATAD2BQ9ULI0 1458 aa14.14□□□□□ -0.15
TXNRD1-208ENST00000525566 BAZ1BQ9UIG0 1483 aaKnown RBP14.1□□□□□ -0.15
TXNRD1-208ENST00000525566 HRCP23327 699 aa14.05□□□□□ -0.16
TXNRD1-208ENST00000525566 TRIM26Q12899 539 aaPredicted RBP14.05□□□□□ -0.16
TXNRD1-208ENST00000525566 SOGA1O94964 1423 aa13.99□□□□□ -0.17
TXNRD1-208ENST00000525566 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
TXNRD1-208ENST00000525566 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
TXNRD1-208ENST00000525566 RUSC2Q8N2Y8 1516 aa13.92□□□□□ -0.18
TXNRD1-208ENST00000525566 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
TXNRD1-208ENST00000525566 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
TXNRD1-208ENST00000525566 EEA1Q15075 1411 aa13.89□□□□□ -0.19
TXNRD1-208ENST00000525566 UBTFP17480 764 aaKnown RBP13.88□□□□□ -0.19
TXNRD1-208ENST00000525566 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
TXNRD1-208ENST00000525566 HMGXB3Q12766 1538 aa13.87□□□□□ -0.19
TXNRD1-208ENST00000525566 TNIKQ9UKE5 1360 aa13.81□□□□□ -0.2
TXNRD1-208ENST00000525566 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
TXNRD1-208ENST00000525566 GOLGA3Q08378 1498 aa13.77□□□□□ -0.2
TXNRD1-208ENST00000525566 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
TXNRD1-208ENST00000525566 TTBK1Q5TCY1 1321 aaPredicted RBP13.73□□□□□ -0.21
TXNRD1-208ENST00000525566 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
TXNRD1-208ENST00000525566 CFTRP13569 1480 aa13.72□□□□□ -0.21
TXNRD1-208ENST00000525566 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
TXNRD1-208ENST00000525566 BIVM-ERCC5R4GMW8 1640 aa13.67□□□□□ -0.22
TXNRD1-208ENST00000525566 KIF21BO75037 1637 aa13.67□□□□□ -0.22
TXNRD1-208ENST00000525566 RANGAP1P46060 587 aaPredicted RBP13.67□□□□□ -0.22
TXNRD1-208ENST00000525566 CUX1P39880 1505 aa13.66□□□□□ -0.22
TXNRD1-208ENST00000525566 RAPGEF2Q9Y4G8 1499 aa13.65□□□□□ -0.22
TXNRD1-208ENST00000525566 CADPSQ9ULU8 1353 aa13.65□□□□□ -0.22
TXNRD1-208ENST00000525566 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
TXNRD1-208ENST00000525566 CLIP1P30622 1438 aa13.62□□□□□ -0.23
TXNRD1-208ENST00000525566 KIF27Q86VH2 1401 aa13.58□□□□□ -0.24
TXNRD1-208ENST00000525566 PRXQ9BXM0 1461 aa13.55□□□□□ -0.24
TXNRD1-208ENST00000525566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
TXNRD1-208ENST00000525566 PRDM2Q13029 1718 aa13.54□□□□□ -0.24
TXNRD1-208ENST00000525566 APLP2Q06481 763 aa13.53□□□□□ -0.24
TXNRD1-208ENST00000525566 VPS8Q8N3P4 1428 aa13.51□□□□□ -0.25
TXNRD1-208ENST00000525566 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
TXNRD1-208ENST00000525566 ERICH3Q5RHP9 1530 aa13.51□□□□□ -0.25
TXNRD1-208ENST00000525566 CUX2O14529 1486 aa13.5□□□□□ -0.25
TXNRD1-208ENST00000525566 FANCD2Q9BXW9 1451 aa13.5□□□□□ -0.25
TXNRD1-208ENST00000525566 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
TXNRD1-208ENST00000525566 NESP48681 1621 aa13.47□□□□□ -0.25
TXNRD1-208ENST00000525566 IGF1RP08069 1367 aa13.45□□□□□ -0.26
TXNRD1-208ENST00000525566 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
TXNRD1-208ENST00000525566 CARMIL1Q5VZK9 1371 aa13.4□□□□□ -0.26
TXNRD1-208ENST00000525566 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
TXNRD1-208ENST00000525566 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
TXNRD1-208ENST00000525566 RAD54L2Q9Y4B4 1467 aa13.38□□□□□ -0.27
TXNRD1-208ENST00000525566 TOPBP1Q92547 1522 aa13.37□□□□□ -0.27
TXNRD1-208ENST00000525566 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
TXNRD1-208ENST00000525566 POLA1P09884 1462 aaPredicted RBP13.35□□□□□ -0.27
TXNRD1-208ENST00000525566 LAMC3Q9Y6N6 1575 aa13.35□□□□□ -0.27
TXNRD1-208ENST00000525566 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.27
TXNRD1-208ENST00000525566 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
TXNRD1-208ENST00000525566 PDS5BQ9NTI5 1447 aa13.31□□□□□ -0.28
TXNRD1-208ENST00000525566 ABCA10Q8WWZ4 1543 aa13.31□□□□□ -0.28
TXNRD1-208ENST00000525566 URB2Q14146 1524 aaKnown RBP13.3□□□□□ -0.28
TXNRD1-208ENST00000525566 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
TXNRD1-208ENST00000525566 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
TXNRD1-208ENST00000525566 ATP1B4Q9UN42 357 aaPredicted RBP13.23□□□□□ -0.29
TXNRD1-208ENST00000525566 KIF21AQ7Z4S6 1674 aa13.2□□□□□ -0.3
TXNRD1-208ENST00000525566 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
TXNRD1-208ENST00000525566 CUL7Q14999 1698 aa13.18□□□□□ -0.3
TXNRD1-208ENST00000525566 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
TXNRD1-208ENST00000525566 FHOD3Q2V2M9 1422 aa13.16□□□□□ -0.3
TXNRD1-208ENST00000525566 ITGAEP38570 1179 aa13.16□□□□□ -0.3
TXNRD1-208ENST00000525566 WDR97A6NE52 1622 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms