RNA–Protein interactions for RNA: ENST00000429002.6

TXNRD1-204, Transcript of thioredoxin reductase 1, humanhuman

TSL 5 BASIC

Gene TXNRD1, Length 3,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNRD1-204ENST00000429002 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
TXNRD1-204ENST00000429002 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
TXNRD1-204ENST00000429002 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
TXNRD1-204ENST00000429002 SHROOM4Q9ULL8 1493 aa17.26■□□□□ 0.35
TXNRD1-204ENST00000429002 ZCCHC6Q5VYS8 1495 aaKnown RBP16.96■□□□□ 0.31
TXNRD1-204ENST00000429002 ABCC9O60706 1549 aa16.87■□□□□ 0.29
TXNRD1-204ENST00000429002 SUPT5HO00267 1087 aaKnown RBP16.68■□□□□ 0.26
TXNRD1-204ENST00000429002 DCAF1Q9Y4B6 1507 aa16.41■□□□□ 0.22
TXNRD1-204ENST00000429002 SCRIBQ14160 1630 aa16.4■□□□□ 0.22
TXNRD1-204ENST00000429002 NACADO15069 1562 aa16.19■□□□□ 0.18
TXNRD1-204ENST00000429002 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
TXNRD1-204ENST00000429002 RB1CC1Q8TDY2 1594 aa16.11■□□□□ 0.17
TXNRD1-204ENST00000429002 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
TXNRD1-204ENST00000429002 CECR2Q9BXF3 1484 aa15.94■□□□□ 0.14
TXNRD1-204ENST00000429002 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
TXNRD1-204ENST00000429002 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
TXNRD1-204ENST00000429002 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.12
TXNRD1-204ENST00000429002 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
TXNRD1-204ENST00000429002 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
TXNRD1-204ENST00000429002 WIZO95785 1651 aa15.65■□□□□ 0.1
TXNRD1-204ENST00000429002 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
TXNRD1-204ENST00000429002 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
TXNRD1-204ENST00000429002 FAM9AQ8IZU1 332 aaPredicted RBP15.5■□□□□ 0.07
TXNRD1-204ENST00000429002 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
TXNRD1-204ENST00000429002 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
TXNRD1-204ENST00000429002 LOC105371045A0A1W2PR82 267 aa15.41■□□□□ 0.06
TXNRD1-204ENST00000429002 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
TXNRD1-204ENST00000429002 TOP2AP11388 1531 aaKnown RBP15.31■□□□□ 0.04
TXNRD1-204ENST00000429002 ATAD2BQ9ULI0 1458 aa15.3■□□□□ 0.04
TXNRD1-204ENST00000429002 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.04
TXNRD1-204ENST00000429002 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
TXNRD1-204ENST00000429002 SMARCA2P51531 1590 aa15.23■□□□□ 0.03
TXNRD1-204ENST00000429002 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
TXNRD1-204ENST00000429002 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
TXNRD1-204ENST00000429002 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
TXNRD1-204ENST00000429002 NCAPD3P42695 1498 aa15.03■□□□□ -0
TXNRD1-204ENST00000429002 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
TXNRD1-204ENST00000429002 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.01
TXNRD1-204ENST00000429002 SOGA1O94964 1423 aa14.95□□□□□ -0.02
TXNRD1-204ENST00000429002 RANGAP1P46060 587 aaPredicted RBP14.94□□□□□ -0.02
TXNRD1-204ENST00000429002 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
TXNRD1-204ENST00000429002 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
TXNRD1-204ENST00000429002 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
TXNRD1-204ENST00000429002 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
TXNRD1-204ENST00000429002 PCGF6Q9BYE7 350 aa14.86□□□□□ -0.03
TXNRD1-204ENST00000429002 TTBK1Q5TCY1 1321 aaPredicted RBP14.85□□□□□ -0.03
TXNRD1-204ENST00000429002 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
TXNRD1-204ENST00000429002 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
TXNRD1-204ENST00000429002 NESP48681 1621 aa14.82□□□□□ -0.04
TXNRD1-204ENST00000429002 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
TXNRD1-204ENST00000429002 CFTRP13569 1480 aa14.78□□□□□ -0.04
TXNRD1-204ENST00000429002 CUX1P39880 1505 aa14.7□□□□□ -0.06
TXNRD1-204ENST00000429002 FANCD2Q9BXW9 1451 aa14.67□□□□□ -0.06
TXNRD1-204ENST00000429002 TOP2BQ02880 1626 aa14.63□□□□□ -0.07
TXNRD1-204ENST00000429002 EEA1Q15075 1411 aa14.59□□□□□ -0.07
TXNRD1-204ENST00000429002 CEP162Q5TB80 1403 aa14.58□□□□□ -0.07
TXNRD1-204ENST00000429002 RAPGEF2Q9Y4G8 1499 aa14.58□□□□□ -0.08
TXNRD1-204ENST00000429002 CUX2O14529 1486 aa14.58□□□□□ -0.08
TXNRD1-204ENST00000429002 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
TXNRD1-204ENST00000429002 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
TXNRD1-204ENST00000429002 GOLGA3Q08378 1498 aa14.56□□□□□ -0.08
TXNRD1-204ENST00000429002 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
TXNRD1-204ENST00000429002 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
TXNRD1-204ENST00000429002 BIVM-ERCC5R4GMW8 1640 aa14.53□□□□□ -0.08
TXNRD1-204ENST00000429002 TNIKQ9UKE5 1360 aa14.53□□□□□ -0.08
TXNRD1-204ENST00000429002 TRIM26Q12899 539 aaPredicted RBP14.52□□□□□ -0.08
TXNRD1-204ENST00000429002 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
TXNRD1-204ENST00000429002 TDRD9Q8NDG6 1382 aaKnown RBP14.49□□□□□ -0.09
TXNRD1-204ENST00000429002 TOPBP1Q92547 1522 aa14.48□□□□□ -0.09
TXNRD1-204ENST00000429002 P3H3Q8IVL6 736 aa14.47□□□□□ -0.09
TXNRD1-204ENST00000429002 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.09
TXNRD1-204ENST00000429002 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
TXNRD1-204ENST00000429002 CLIP1P30622 1438 aa14.45□□□□□ -0.1
TXNRD1-204ENST00000429002 POLA1P09884 1462 aaPredicted RBP14.45□□□□□ -0.1
TXNRD1-204ENST00000429002 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
TXNRD1-204ENST00000429002 IGF1RP08069 1367 aa14.43□□□□□ -0.1
TXNRD1-204ENST00000429002 ATP1B4Q9UN42 357 aaPredicted RBP14.41□□□□□ -0.1
TXNRD1-204ENST00000429002 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
TXNRD1-204ENST00000429002 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
TXNRD1-204ENST00000429002 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
TXNRD1-204ENST00000429002 DNMBPQ6XZF7 1577 aa14.4□□□□□ -0.1
TXNRD1-204ENST00000429002 APLP2Q06481 763 aa14.4□□□□□ -0.11
TXNRD1-204ENST00000429002 KIF21BO75037 1637 aa14.38□□□□□ -0.11
TXNRD1-204ENST00000429002 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
TXNRD1-204ENST00000429002 AQRO60306 1485 aaKnown RBP eCLIP14.32□□□□□ -0.125e-7■■■■□ 24.3
TXNRD1-204ENST00000429002 FBLN2P98095 1184 aa14.31□□□□□ -0.12
TXNRD1-204ENST00000429002 ABCA10Q8WWZ4 1543 aa14.29□□□□□ -0.12
TXNRD1-204ENST00000429002 HRCP23327 699 aa14.28□□□□□ -0.12
TXNRD1-204ENST00000429002 MRC2Q9UBG0 1479 aa14.27□□□□□ -0.12
TXNRD1-204ENST00000429002 GAPVD1Q14C86 1478 aa14.27□□□□□ -0.13
TXNRD1-204ENST00000429002 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
TXNRD1-204ENST00000429002 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
TXNRD1-204ENST00000429002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
TXNRD1-204ENST00000429002 ZNF608Q9ULD9 1512 aaPredicted RBP14.24□□□□□ -0.13
TXNRD1-204ENST00000429002 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
TXNRD1-204ENST00000429002 ARID3CA6NKF2 412 aa14.24□□□□□ -0.13
TXNRD1-204ENST00000429002 ARAP1Q96P48 1450 aa14.23□□□□□ -0.13
TXNRD1-204ENST00000429002 KANK4Q5T7N3 995 aaPredicted RBP14.22□□□□□ -0.13
TXNRD1-204ENST00000429002 ARHGAP35Q9NRY4 1499 aa14.19□□□□□ -0.14
TXNRD1-204ENST00000429002 ITGAEP38570 1179 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms