RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 NISCHQ9Y2I1 1504 aa42.07■■■■■ 4.32
VBP1-201ENST00000286428 CCDC180Q9P1Z9 1646 aa36.54■■■■□ 3.44
VBP1-201ENST00000286428 ZCCHC6Q5VYS8 1495 aaKnown RBP35.37■■■■□ 3.25
VBP1-201ENST00000286428 DCAF1Q9Y4B6 1507 aa34.87■■■■□ 3.17
VBP1-201ENST00000286428 DCAF8L2P0C7V8 631 aa34.73■■■■□ 3.15
VBP1-201ENST00000286428 SHROOM4Q9ULL8 1493 aa34.41■■■■□ 3.1
VBP1-201ENST00000286428 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
VBP1-201ENST00000286428 ABCC9O60706 1549 aa34.28■■■■□ 3.08
VBP1-201ENST00000286428 NACADO15069 1562 aa34.06■■■■□ 3.04
VBP1-201ENST00000286428 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
VBP1-201ENST00000286428 SCRIBQ14160 1630 aa33.55■■■□□ 2.96
VBP1-201ENST00000286428 SUPT5HO00267 1087 aaKnown RBP33.35■■■□□ 2.93
VBP1-201ENST00000286428 UNC13AQ9UPW8 1703 aa32.74■■■□□ 2.83
VBP1-201ENST00000286428 RSF1Q96T23 1441 aaPredicted RBP32.73■■■□□ 2.83
VBP1-201ENST00000286428 CECR2Q9BXF3 1484 aa32.57■■■□□ 2.8
VBP1-201ENST00000286428 BAZ1AQ9NRL2 1556 aaPredicted RBP32.51■■■□□ 2.8
VBP1-201ENST00000286428 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
VBP1-201ENST00000286428 MROH2BQ7Z745 1585 aa32.42■■■□□ 2.78
VBP1-201ENST00000286428 PABPN1Q86U42 306 aaKnown RBP eCLIP32.41■■■□□ 2.78
VBP1-201ENST00000286428 SMARCA4P51532 1647 aa32.23■■■□□ 2.75
VBP1-201ENST00000286428 WIZO95785 1651 aa32.13■■■□□ 2.73
VBP1-201ENST00000286428 CHIC1Q5VXU3 224 aa32.07■■■□□ 2.72
VBP1-201ENST00000286428 TOP2AP11388 1531 aaKnown RBP31.92■■■□□ 2.7
VBP1-201ENST00000286428 PEG3Q9GZU2 1588 aa31.88■■■□□ 2.69
VBP1-201ENST00000286428 SMARCA2P51531 1590 aa31.75■■■□□ 2.67
VBP1-201ENST00000286428 ATAD2BQ9ULI0 1458 aa31.7■■■□□ 2.66
VBP1-201ENST00000286428 CCDC88BA6NC98 1476 aa31.6■■■□□ 2.65
VBP1-201ENST00000286428 EIF4G1Q04637 1599 aaKnown RBP31.58■■■□□ 2.65
VBP1-201ENST00000286428 BAZ1BQ9UIG0 1483 aaKnown RBP31.56■■■□□ 2.64
VBP1-201ENST00000286428 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
VBP1-201ENST00000286428 NCAPD3P42695 1498 aa31.44■■■□□ 2.62
VBP1-201ENST00000286428 HMGXB3Q12766 1538 aa31.37■■■□□ 2.61
VBP1-201ENST00000286428 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
VBP1-201ENST00000286428 ABCC8Q09428 1581 aa30.9■■■□□ 2.54
VBP1-201ENST00000286428 WRNQ14191 1432 aaPredicted RBP eCLIP30.86■■■□□ 2.53
VBP1-201ENST00000286428 CFTRP13569 1480 aa30.79■■■□□ 2.52
VBP1-201ENST00000286428 LOC105371045A0A1W2PR82 267 aa30.78■■■□□ 2.52
VBP1-201ENST00000286428 FAM9AQ8IZU1 332 aaPredicted RBP30.74■■■□□ 2.51
VBP1-201ENST00000286428 EEA1Q15075 1411 aa30.68■■■□□ 2.5
VBP1-201ENST00000286428 CADPSQ9ULU8 1353 aa30.67■■■□□ 2.5
VBP1-201ENST00000286428 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
VBP1-201ENST00000286428 TOP2BQ02880 1626 aa30.51■■■□□ 2.47
VBP1-201ENST00000286428 PRDM2Q13029 1718 aa30.51■■■□□ 2.47
VBP1-201ENST00000286428 SOGA1O94964 1423 aa30.46■■■□□ 2.47
VBP1-201ENST00000286428 CSRNP3Q8WYN3 585 aa30.44■■■□□ 2.46
VBP1-201ENST00000286428 BIVM-ERCC5R4GMW8 1640 aa30.44■■■□□ 2.46
VBP1-201ENST00000286428 CUX1P39880 1505 aa30.31■■■□□ 2.44
VBP1-201ENST00000286428 LAMC3Q9Y6N6 1575 aa30.3■■■□□ 2.44
VBP1-201ENST00000286428 FANCD2Q9BXW9 1451 aa30.27■■■□□ 2.44
VBP1-201ENST00000286428 RUSC2Q8N2Y8 1516 aa30.25■■■□□ 2.43
VBP1-201ENST00000286428 EHMT2Q96KQ7 1210 aa30.21■■■□□ 2.43
VBP1-201ENST00000286428 GOLGA3Q08378 1498 aa30.16■■■□□ 2.42
VBP1-201ENST00000286428 CEP164Q9UPV0 1460 aa30.16■■■□□ 2.42
VBP1-201ENST00000286428 PDS5BQ9NTI5 1447 aa30.16■■■□□ 2.42
VBP1-201ENST00000286428 TNIKQ9UKE5 1360 aa30.15■■■□□ 2.42
VBP1-201ENST00000286428 KIF27Q86VH2 1401 aa30.12■■■□□ 2.41
VBP1-201ENST00000286428 NESP48681 1621 aa30.11■■■□□ 2.41
VBP1-201ENST00000286428 KIF21BO75037 1637 aa30.1■■■□□ 2.41
VBP1-201ENST00000286428 UBTFP17480 764 aaKnown RBP30.07■■■□□ 2.41
VBP1-201ENST00000286428 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
VBP1-201ENST00000286428 DNAJC5BQ9UF47 199 aa30.01■■■□□ 2.4
VBP1-201ENST00000286428 FGD5Q6ZNL6 1462 aa29.98■■■□□ 2.39
VBP1-201ENST00000286428 TOPBP1Q92547 1522 aa29.94■■■□□ 2.38
VBP1-201ENST00000286428 CEP162Q5TB80 1403 aa29.92■■■□□ 2.38
VBP1-201ENST00000286428 ERICH3Q5RHP9 1530 aa29.9■■■□□ 2.38
VBP1-201ENST00000286428 PRXQ9BXM0 1461 aa29.89■■■□□ 2.38
VBP1-201ENST00000286428 CUX2O14529 1486 aa29.88■■■□□ 2.37
VBP1-201ENST00000286428 RAPGEF2Q9Y4G8 1499 aa29.83■■■□□ 2.37
VBP1-201ENST00000286428 POLA1P09884 1462 aaPredicted RBP29.81■■■□□ 2.36
VBP1-201ENST00000286428 TRIM26Q12899 539 aaPredicted RBP29.79■■■□□ 2.36
VBP1-201ENST00000286428 URB2Q14146 1524 aaKnown RBP29.79■■■□□ 2.36
VBP1-201ENST00000286428 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
VBP1-201ENST00000286428 IGF1RP08069 1367 aa29.76■■■□□ 2.35
VBP1-201ENST00000286428 PCGF6Q9BYE7 350 aa29.73■■■□□ 2.35
VBP1-201ENST00000286428 KIF21AQ7Z4S6 1674 aa29.71■■■□□ 2.35
VBP1-201ENST00000286428 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
VBP1-201ENST00000286428 CLIP1P30622 1438 aa29.67■■■□□ 2.34
VBP1-201ENST00000286428 MRC2Q9UBG0 1479 aa29.66■■■□□ 2.34
VBP1-201ENST00000286428 CARMIL1Q5VZK9 1371 aa29.65■■■□□ 2.34
VBP1-201ENST00000286428 WDR97A6NE52 1622 aa29.5■■■□□ 2.31
VBP1-201ENST00000286428 CUL7Q14999 1698 aa29.49■■■□□ 2.31
VBP1-201ENST00000286428 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
VBP1-201ENST00000286428 GAPVD1Q14C86 1478 aa29.46■■■□□ 2.31
VBP1-201ENST00000286428 VPS8Q8N3P4 1428 aa29.46■■■□□ 2.31
VBP1-201ENST00000286428 WDR62O43379 1518 aa29.45■■■□□ 2.3
VBP1-201ENST00000286428 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
VBP1-201ENST00000286428 TDRD9Q8NDG6 1382 aaKnown RBP29.41■■■□□ 2.3
VBP1-201ENST00000286428 TARBP1Q13395 1621 aaKnown RBP29.41■■■□□ 2.3
VBP1-201ENST00000286428 APLP2Q06481 763 aa29.38■■■□□ 2.29
VBP1-201ENST00000286428 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
VBP1-201ENST00000286428 RANGAP1P46060 587 aaPredicted RBP29.36■■■□□ 2.29
VBP1-201ENST00000286428 PPARGC1BQ86YN6 1023 aaKnown RBP29.26■■■□□ 2.27
VBP1-201ENST00000286428 ARAP1Q96P48 1450 aa29.25■■■□□ 2.27
VBP1-201ENST00000286428 ARHGAP35Q9NRY4 1499 aa29.23■■■□□ 2.27
VBP1-201ENST00000286428 GRIN2BQ13224 1484 aa29.21■■■□□ 2.27
VBP1-201ENST00000286428 THOC2Q8NI27 1593 aaKnown RBP29.2■■■□□ 2.27
VBP1-201ENST00000286428 FHAD1B1AJZ9 1412 aa29.18■■■□□ 2.26
VBP1-201ENST00000286428 AQRO60306 1485 aaKnown RBP eCLIP29.16■■■□□ 2.26
VBP1-201ENST00000286428 HRCP23327 699 aa29.12■■■□□ 2.25
VBP1-201ENST00000286428 PBRM1Q86U86 1689 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms