RNA–Protein interactions for RNA: ENST00000354940.10

TXNRD1-201, Transcript of thioredoxin reductase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TXNRD1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNRD1-201ENST00000354940 NISCHQ9Y2I1 1504 aa21.4■■□□□ 1.02
TXNRD1-201ENST00000354940 SUPT5HO00267 1087 aaKnown RBP20.59■□□□□ 0.89
TXNRD1-201ENST00000354940 PCGF6Q9BYE7 350 aa20.39■□□□□ 0.85
TXNRD1-201ENST00000354940 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
TXNRD1-201ENST00000354940 HRCP23327 699 aa20.28■□□□□ 0.84
TXNRD1-201ENST00000354940 PPARGC1BQ86YN6 1023 aaKnown RBP20.13■□□□□ 0.81
TXNRD1-201ENST00000354940 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
TXNRD1-201ENST00000354940 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
TXNRD1-201ENST00000354940 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
TXNRD1-201ENST00000354940 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
TXNRD1-201ENST00000354940 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
TXNRD1-201ENST00000354940 ZEB1P37275 1124 aaPredicted RBP19.37■□□□□ 0.69
TXNRD1-201ENST00000354940 TRIM26Q12899 539 aaPredicted RBP19.35■□□□□ 0.69
TXNRD1-201ENST00000354940 MYT1Q01538 1121 aa19.35■□□□□ 0.69
TXNRD1-201ENST00000354940 FAM9AQ8IZU1 332 aaPredicted RBP19.25■□□□□ 0.67
TXNRD1-201ENST00000354940 CENPBP07199 599 aaPredicted RBP19.22■□□□□ 0.67
TXNRD1-201ENST00000354940 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
TXNRD1-201ENST00000354940 MYO15BQ96JP2 1530 aa19.06■□□□□ 0.64
TXNRD1-201ENST00000354940 CCER1Q8TC90 406 aaPredicted RBP19.06■□□□□ 0.64
TXNRD1-201ENST00000354940 YTHDC1Q96MU7 727 aaKnown RBP19.05■□□□□ 0.64
TXNRD1-201ENST00000354940 TTBK1Q5TCY1 1321 aaPredicted RBP19.04■□□□□ 0.64
TXNRD1-201ENST00000354940 GTF3C3Q9Y5Q9 886 aa19.01■□□□□ 0.63
TXNRD1-201ENST00000354940 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
TXNRD1-201ENST00000354940 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
TXNRD1-201ENST00000354940 NEUROD1Q13562 356 aa18.83■□□□□ 0.6
TXNRD1-201ENST00000354940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.82■□□□□ 0.6
TXNRD1-201ENST00000354940 DIEXFQ68CQ4 756 aaKnown RBP18.79■□□□□ 0.6
TXNRD1-201ENST00000354940 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
TXNRD1-201ENST00000354940 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
TXNRD1-201ENST00000354940 ZNF316A6NFI3 1004 aaPredicted RBP18.26■□□□□ 0.51
TXNRD1-201ENST00000354940 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
TXNRD1-201ENST00000354940 APLP2Q06481 763 aa18.18■□□□□ 0.5
TXNRD1-201ENST00000354940 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
TXNRD1-201ENST00000354940 UBTFP17480 764 aaKnown RBP18.17■□□□□ 0.5
TXNRD1-201ENST00000354940 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
TXNRD1-201ENST00000354940 ABCC9O60706 1549 aa18.15■□□□□ 0.5
TXNRD1-201ENST00000354940 BCANQ96GW7 911 aa18.15■□□□□ 0.5
TXNRD1-201ENST00000354940 MIER1Q8N108 512 aa18.12■□□□□ 0.49
TXNRD1-201ENST00000354940 NEFLP07196 543 aa18.05■□□□□ 0.48
TXNRD1-201ENST00000354940 ZCCHC6Q5VYS8 1495 aaKnown RBP18.04■□□□□ 0.48
TXNRD1-201ENST00000354940 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
TXNRD1-201ENST00000354940 ANP32EQ9BTT0 268 aa17.92■□□□□ 0.46
TXNRD1-201ENST00000354940 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
TXNRD1-201ENST00000354940 ITGAEP38570 1179 aa17.76■□□□□ 0.43
TXNRD1-201ENST00000354940 FKBP8Q14318 412 aa17.75■□□□□ 0.43
TXNRD1-201ENST00000354940 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
TXNRD1-201ENST00000354940 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
TXNRD1-201ENST00000354940 TSHZ2Q9NRE2 1034 aa17.67■□□□□ 0.42
TXNRD1-201ENST00000354940 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
TXNRD1-201ENST00000354940 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
TXNRD1-201ENST00000354940 TRIM52Q96A61 297 aa17.49■□□□□ 0.39
TXNRD1-201ENST00000354940 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
TXNRD1-201ENST00000354940 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
TXNRD1-201ENST00000354940 DDX10Q13206 875 aaKnown RBP17.44■□□□□ 0.38
TXNRD1-201ENST00000354940 ATP1B4Q9UN42 357 aaPredicted RBP17.43■□□□□ 0.38
TXNRD1-201ENST00000354940 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
TXNRD1-201ENST00000354940 CEP162Q5TB80 1403 aa17.41■□□□□ 0.38
TXNRD1-201ENST00000354940 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
TXNRD1-201ENST00000354940 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
TXNRD1-201ENST00000354940 ANP32CO43423 234 aa17.37■□□□□ 0.37
TXNRD1-201ENST00000354940 NBR1Q14596 966 aa17.37■□□□□ 0.37
TXNRD1-201ENST00000354940 CNGB1Q14028 1251 aaPredicted RBP17.35■□□□□ 0.37
TXNRD1-201ENST00000354940 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
TXNRD1-201ENST00000354940 KCNH8Q96L42 1107 aa17.3■□□□□ 0.36
TXNRD1-201ENST00000354940 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
TXNRD1-201ENST00000354940 HNRNPUQ00839 825 aaKnown RBP eCLIP17.23■□□□□ 0.35
TXNRD1-201ENST00000354940 FAM50AQ14320 339 aaKnown RBP17.19■□□□□ 0.34
TXNRD1-201ENST00000354940 DEKP35659 375 aaKnown RBP17.18■□□□□ 0.34
TXNRD1-201ENST00000354940 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
TXNRD1-201ENST00000354940 MYT1LQ9UL68 1186 aa17.14■□□□□ 0.33
TXNRD1-201ENST00000354940 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
TXNRD1-201ENST00000354940 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
TXNRD1-201ENST00000354940 EIF5BO60841 1220 aaKnown RBP17.12■□□□□ 0.33
TXNRD1-201ENST00000354940 CLIP1P30622 1438 aa17.09■□□□□ 0.33
TXNRD1-201ENST00000354940 SOGA1O94964 1423 aa17.09■□□□□ 0.33
TXNRD1-201ENST00000354940 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
TXNRD1-201ENST00000354940 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.33
TXNRD1-201ENST00000354940 PRKCSHP14314 528 aaPredicted RBP17.07■□□□□ 0.32
TXNRD1-201ENST00000354940 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.32
TXNRD1-201ENST00000354940 NACADO15069 1562 aa17.01■□□□□ 0.31
TXNRD1-201ENST00000354940 FAM9BQ8IZU0 186 aa17.01■□□□□ 0.31
TXNRD1-201ENST00000354940 DAXXQ9UER7 740 aaPredicted RBP17.01■□□□□ 0.31
TXNRD1-201ENST00000354940 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
TXNRD1-201ENST00000354940 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
TXNRD1-201ENST00000354940 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
TXNRD1-201ENST00000354940 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
TXNRD1-201ENST00000354940 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
TXNRD1-201ENST00000354940 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
TXNRD1-201ENST00000354940 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.3
TXNRD1-201ENST00000354940 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
TXNRD1-201ENST00000354940 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
TXNRD1-201ENST00000354940 MSH5O43196 834 aa16.93■□□□□ 0.3
TXNRD1-201ENST00000354940 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.93■□□□□ 0.3
TXNRD1-201ENST00000354940 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
TXNRD1-201ENST00000354940 ANO8Q9HCE9 1232 aaPredicted RBP16.9■□□□□ 0.3
TXNRD1-201ENST00000354940 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.3
TXNRD1-201ENST00000354940 PPP4R2Q9NY27 417 aa16.88■□□□□ 0.29
TXNRD1-201ENST00000354940 EEA1Q15075 1411 aa16.86■□□□□ 0.29
TXNRD1-201ENST00000354940 TONSLQ96HA7 1378 aa16.86■□□□□ 0.29
TXNRD1-201ENST00000354940 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms