RNA–Protein interactions for RNA: ENST00000536813.5

HMBS-208, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 3

Gene HMBS, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-208ENST00000536813 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
HMBS-208ENST00000536813 ABCC9O60706 1549 aa35■■■■□ 3.19
HMBS-208ENST00000536813 DNAJC5BQ9UF47 199 aa33.96■■■■□ 3.03
HMBS-208ENST00000536813 CCDC180Q9P1Z9 1646 aa33.74■■■□□ 2.99
HMBS-208ENST00000536813 RB1CC1Q8TDY2 1594 aa32.77■■■□□ 2.84
HMBS-208ENST00000536813 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
HMBS-208ENST00000536813 NACADO15069 1562 aa32.27■■■□□ 2.76
HMBS-208ENST00000536813 DNAJC5Q9H3Z4 198 aa32.19■■■□□ 2.74
HMBS-208ENST00000536813 UNC13AQ9UPW8 1703 aa31.85■■■□□ 2.69
HMBS-208ENST00000536813 BICRAQ9NZM4 1560 aa31.82■■■□□ 2.68
HMBS-208ENST00000536813 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
HMBS-208ENST00000536813 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.66
HMBS-208ENST00000536813 CC2D2AQ9P2K1 1620 aa31.52■■■□□ 2.64
HMBS-208ENST00000536813 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.63
HMBS-208ENST00000536813 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
HMBS-208ENST00000536813 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
HMBS-208ENST00000536813 ZCCHC6Q5VYS8 1495 aaKnown RBP30.97■■■□□ 2.55
HMBS-208ENST00000536813 CUX2O14529 1486 aa30.76■■■□□ 2.51
HMBS-208ENST00000536813 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
HMBS-208ENST00000536813 SCRIBQ14160 1630 aa30.63■■■□□ 2.49
HMBS-208ENST00000536813 ERCC6Q03468 1493 aa30.34■■■□□ 2.45
HMBS-208ENST00000536813 TRIM41Q8WV44 630 aa30.2■■■□□ 2.43
HMBS-208ENST00000536813 NCAPD3P42695 1498 aa29.84■■■□□ 2.37
HMBS-208ENST00000536813 NESP48681 1621 aa29.67■■■□□ 2.34
HMBS-208ENST00000536813 THOC2Q8NI27 1593 aaKnown RBP29.63■■■□□ 2.33
HMBS-208ENST00000536813 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
HMBS-208ENST00000536813 HMGXB3Q12766 1538 aa29.46■■■□□ 2.31
HMBS-208ENST00000536813 SMARCA2P51531 1590 aa29.38■■■□□ 2.29
HMBS-208ENST00000536813 LAMC3Q9Y6N6 1575 aa29.31■■■□□ 2.28
HMBS-208ENST00000536813 PDS5BQ9NTI5 1447 aa29.26■■■□□ 2.27
HMBS-208ENST00000536813 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
HMBS-208ENST00000536813 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
HMBS-208ENST00000536813 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
HMBS-208ENST00000536813 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
HMBS-208ENST00000536813 BAZ1AQ9NRL2 1556 aaPredicted RBP29.11■■■□□ 2.25
HMBS-208ENST00000536813 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
HMBS-208ENST00000536813 WDR62O43379 1518 aa28.98■■■□□ 2.23
HMBS-208ENST00000536813 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.22
HMBS-208ENST00000536813 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
HMBS-208ENST00000536813 RIMBP3CA6NJZ7 1639 aa28.8■■■□□ 2.2
HMBS-208ENST00000536813 RIMBP3BA6NNM3 1639 aa28.8■■■□□ 2.2
HMBS-208ENST00000536813 RIMBP3Q9UFD9 1639 aa28.8■■■□□ 2.2
HMBS-208ENST00000536813 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
HMBS-208ENST00000536813 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
HMBS-208ENST00000536813 ARHGEF11O15085 1522 aa28.63■■■□□ 2.17
HMBS-208ENST00000536813 TRHP20396 242 aaPredicted RBP28.62■■■□□ 2.17
HMBS-208ENST00000536813 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
HMBS-208ENST00000536813 CYB5RLQ6IPT4 315 aa28.52■■■□□ 2.16
HMBS-208ENST00000536813 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
HMBS-208ENST00000536813 WIZO95785 1651 aa28.38■■■□□ 2.13
HMBS-208ENST00000536813 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
HMBS-208ENST00000536813 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
HMBS-208ENST00000536813 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
HMBS-208ENST00000536813 CFTRP13569 1480 aa28.26■■■□□ 2.11
HMBS-208ENST00000536813 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
HMBS-208ENST00000536813 IFT140Q96RY7 1462 aa28.15■■■□□ 2.1
HMBS-208ENST00000536813 TOP2AP11388 1531 aaKnown RBP28.08■■■□□ 2.09
HMBS-208ENST00000536813 SUPT5HO00267 1087 aaKnown RBP28■■■□□ 2.07
HMBS-208ENST00000536813 EIF4G3O43432 1585 aaKnown RBP27.92■■■□□ 2.06
HMBS-208ENST00000536813 CHD1O14646 1710 aa27.89■■■□□ 2.06
HMBS-208ENST00000536813 FBLN2P98095 1184 aa27.87■■■□□ 2.05
HMBS-208ENST00000536813 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
HMBS-208ENST00000536813 AQRO60306 1485 aaKnown RBP eCLIP27.78■■■□□ 2.042e-8■■■■■ 32.5
HMBS-208ENST00000536813 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
HMBS-208ENST00000536813 PRDM2Q13029 1718 aa27.7■■■□□ 2.03
HMBS-208ENST00000536813 ILDR1Q86SU0 546 aaPredicted RBP27.68■■■□□ 2.02
HMBS-208ENST00000536813 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
HMBS-208ENST00000536813 CLASP1Q7Z460 1538 aa27.65■■■□□ 2.02
HMBS-208ENST00000536813 TARBP1Q13395 1621 aaKnown RBP27.62■■■□□ 2.01
HMBS-208ENST00000536813 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
HMBS-208ENST00000536813 SYNJ1O43426 1573 aa27.53■■■□□ 2
HMBS-208ENST00000536813 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
HMBS-208ENST00000536813 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
HMBS-208ENST00000536813 SNAPC4Q5SXM2 1469 aa27.46■■□□□ 1.99
HMBS-208ENST00000536813 POLA1P09884 1462 aaPredicted RBP27.45■■□□□ 1.99
HMBS-208ENST00000536813 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
HMBS-208ENST00000536813 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
HMBS-208ENST00000536813 RAD54L2Q9Y4B4 1467 aa27.35■■□□□ 1.97
HMBS-208ENST00000536813 SOGA1O94964 1423 aa27.33■■□□□ 1.96
HMBS-208ENST00000536813 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
HMBS-208ENST00000536813 SYNJ2O15056 1496 aa27.29■■□□□ 1.96
HMBS-208ENST00000536813 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
HMBS-208ENST00000536813 KDM4FA0A1W2PPD8 638 aa27.21■■□□□ 1.95
HMBS-208ENST00000536813 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
HMBS-208ENST00000536813 KIF13AQ9H1H9 1805 aa27.09■■□□□ 1.93
HMBS-208ENST00000536813 ERCC6L2Q5T890 1561 aa27.08■■□□□ 1.93
HMBS-208ENST00000536813 FAM69CQ0P6D2 419 aa26.96■■□□□ 1.91
HMBS-208ENST00000536813 CEP170Q5SW79 1584 aa26.95■■□□□ 1.9
HMBS-208ENST00000536813 ABCC10Q5T3U5 1492 aa26.92■■□□□ 1.9
HMBS-208ENST00000536813 PBRM1Q86U86 1689 aa26.9■■□□□ 1.9
HMBS-208ENST00000536813 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
HMBS-208ENST00000536813 NUP160Q12769 1436 aa26.86■■□□□ 1.89
HMBS-208ENST00000536813 KDM6BO15054 1643 aa26.86■■□□□ 1.89
HMBS-208ENST00000536813 CUX1P39880 1505 aa26.85■■□□□ 1.89
HMBS-208ENST00000536813 SHROOM2Q13796 1616 aa26.8■■□□□ 1.88
HMBS-208ENST00000536813 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
HMBS-208ENST00000536813 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
HMBS-208ENST00000536813 NPM1P06748 294 aaKnown RBP eCLIP26.78■■□□□ 1.88
HMBS-208ENST00000536813 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
HMBS-208ENST00000536813 DIP2BQ9P265 1576 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms