RNA–Protein interactions for RNA: ENST00000579380.1

MRPS23-203, Transcript of mitochondrial ribosomal protein S23, humanhuman

TSL 3

Gene MRPS23, Length 516 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS23-203ENST00000579380 NISCHQ9Y2I1 1504 aa48.01■■■■■ 5.28
MRPS23-203ENST00000579380 CCDC180Q9P1Z9 1646 aa42.71■■■■■ 4.43
MRPS23-203ENST00000579380 ABCC9O60706 1549 aa42.05■■■■■ 4.32
MRPS23-203ENST00000579380 RB1CC1Q8TDY2 1594 aa40.32■■■■■ 4.05
MRPS23-203ENST00000579380 NACADO15069 1562 aa40.26■■■■■ 4.04
MRPS23-203ENST00000579380 DCAF8L2P0C7V8 631 aa40.13■■■■■ 4.01
MRPS23-203ENST00000579380 MYO15BQ96JP2 1530 aa40.01■■■■□ 3.99
MRPS23-203ENST00000579380 ZCCHC6Q5VYS8 1495 aaKnown RBP39.93■■■■□ 3.98
MRPS23-203ENST00000579380 DCAF1Q9Y4B6 1507 aa39.73■■■■□ 3.95
MRPS23-203ENST00000579380 UNC13AQ9UPW8 1703 aa39.39■■■■□ 3.9
MRPS23-203ENST00000579380 PABPN1Q86U42 306 aaKnown RBP eCLIP39.3■■■■□ 3.88
MRPS23-203ENST00000579380 BICRAQ9NZM4 1560 aa39.2■■■■□ 3.87
MRPS23-203ENST00000579380 DNAJC5BQ9UF47 199 aa38.97■■■■□ 3.83
MRPS23-203ENST00000579380 SCRIBQ14160 1630 aa38.92■■■■□ 3.82
MRPS23-203ENST00000579380 SHROOM4Q9ULL8 1493 aa38.73■■■■□ 3.79
MRPS23-203ENST00000579380 EIF4G1Q04637 1599 aaKnown RBP38.14■■■■□ 3.7
MRPS23-203ENST00000579380 CC2D2AQ9P2K1 1620 aa38.03■■■■□ 3.68
MRPS23-203ENST00000579380 CECR2Q9BXF3 1484 aa37.83■■■■□ 3.65
MRPS23-203ENST00000579380 SMARCA4P51532 1647 aa37.25■■■■□ 3.55
MRPS23-203ENST00000579380 NCAPD3P42695 1498 aa37.22■■■■□ 3.55
MRPS23-203ENST00000579380 ATAD2BQ9ULI0 1458 aa37.18■■■■□ 3.54
MRPS23-203ENST00000579380 BAZ1AQ9NRL2 1556 aaPredicted RBP37.17■■■■□ 3.54
MRPS23-203ENST00000579380 SMARCA2P51531 1590 aa37.05■■■■□ 3.52
MRPS23-203ENST00000579380 MROH2BQ7Z745 1585 aa36.99■■■■□ 3.51
MRPS23-203ENST00000579380 PEG3Q9GZU2 1588 aa36.95■■■■□ 3.51
MRPS23-203ENST00000579380 HMGXB3Q12766 1538 aa36.95■■■■□ 3.5
MRPS23-203ENST00000579380 BAZ1BQ9UIG0 1483 aaKnown RBP36.79■■■■□ 3.48
MRPS23-203ENST00000579380 WIZO95785 1651 aa36.52■■■■□ 3.44
MRPS23-203ENST00000579380 RSF1Q96T23 1441 aaPredicted RBP36.51■■■■□ 3.43
MRPS23-203ENST00000579380 NESP48681 1621 aa36.34■■■■□ 3.41
MRPS23-203ENST00000579380 ERCC6Q03468 1493 aa36.21■■■■□ 3.39
MRPS23-203ENST00000579380 LAMC3Q9Y6N6 1575 aa36.19■■■■□ 3.38
MRPS23-203ENST00000579380 TOP2AP11388 1531 aaKnown RBP36.13■■■■□ 3.38
MRPS23-203ENST00000579380 CADPSQ9ULU8 1353 aa36.1■■■■□ 3.37
MRPS23-203ENST00000579380 CUX2O14529 1486 aa35.99■■■■□ 3.35
MRPS23-203ENST00000579380 PDS5BQ9NTI5 1447 aa35.98■■■■□ 3.35
MRPS23-203ENST00000579380 CFTRP13569 1480 aa35.84■■■■□ 3.33
MRPS23-203ENST00000579380 KIF21AQ7Z4S6 1674 aa35.83■■■■□ 3.33
MRPS23-203ENST00000579380 THOC2Q8NI27 1593 aaKnown RBP35.82■■■■□ 3.32
MRPS23-203ENST00000579380 CCDC88BA6NC98 1476 aa35.77■■■■□ 3.32
MRPS23-203ENST00000579380 FANCD2Q9BXW9 1451 aa35.64■■■■□ 3.3
MRPS23-203ENST00000579380 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
MRPS23-203ENST00000579380 CEP164Q9UPV0 1460 aa35.59■■■■□ 3.29
MRPS23-203ENST00000579380 WDR62O43379 1518 aa35.52■■■■□ 3.28
MRPS23-203ENST00000579380 PRDM2Q13029 1718 aa35.4■■■■□ 3.26
MRPS23-203ENST00000579380 URB2Q14146 1524 aaKnown RBP35.32■■■■□ 3.25
MRPS23-203ENST00000579380 SUPT5HO00267 1087 aaKnown RBP35.31■■■■□ 3.24
MRPS23-203ENST00000579380 DNAJC5Q9H3Z4 198 aa35.25■■■■□ 3.23
MRPS23-203ENST00000579380 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
MRPS23-203ENST00000579380 ABCC8Q09428 1581 aa35.03■■■■□ 3.2
MRPS23-203ENST00000579380 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
MRPS23-203ENST00000579380 IFT140Q96RY7 1462 aa34.88■■■■□ 3.17
MRPS23-203ENST00000579380 ZNF608Q9ULD9 1512 aaPredicted RBP34.77■■■■□ 3.16
MRPS23-203ENST00000579380 POLA1P09884 1462 aaPredicted RBP34.75■■■■□ 3.15
MRPS23-203ENST00000579380 CUX1P39880 1505 aa34.71■■■■□ 3.15
MRPS23-203ENST00000579380 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.14
MRPS23-203ENST00000579380 FGD5Q6ZNL6 1462 aa34.6■■■■□ 3.13
MRPS23-203ENST00000579380 RAD54L2Q9Y4B4 1467 aa34.6■■■■□ 3.13
MRPS23-203ENST00000579380 SOGA1O94964 1423 aa34.6■■■■□ 3.13
MRPS23-203ENST00000579380 EIF4G3O43432 1585 aaKnown RBP34.55■■■■□ 3.12
MRPS23-203ENST00000579380 AQRO60306 1485 aaKnown RBP eCLIP34.55■■■■□ 3.121e-7■□□□□ 10.1
MRPS23-203ENST00000579380 OSCARQ8IYS5 282 aa34.48■■■■□ 3.11
MRPS23-203ENST00000579380 TDRD9Q8NDG6 1382 aaKnown RBP34.44■■■■□ 3.1
MRPS23-203ENST00000579380 WRNQ14191 1432 aaPredicted RBP eCLIP34.38■■■■□ 3.09
MRPS23-203ENST00000579380 WDR97A6NE52 1622 aa34.37■■■■□ 3.09
MRPS23-203ENST00000579380 TOP2BQ02880 1626 aa34.32■■■■□ 3.08
MRPS23-203ENST00000579380 BIVM-ERCC5R4GMW8 1640 aa34.3■■■■□ 3.08
MRPS23-203ENST00000579380 SYNJ1O43426 1573 aa34.29■■■■□ 3.08
MRPS23-203ENST00000579380 ABCA10Q8WWZ4 1543 aa34.29■■■■□ 3.08
MRPS23-203ENST00000579380 GRIN2BQ13224 1484 aa34.2■■■■□ 3.07
MRPS23-203ENST00000579380 GAPVD1Q14C86 1478 aa34.18■■■■□ 3.06
MRPS23-203ENST00000579380 SNAPC4Q5SXM2 1469 aa34.18■■■■□ 3.06
MRPS23-203ENST00000579380 ABCA5Q8WWZ7 1642 aa34.14■■■■□ 3.06
MRPS23-203ENST00000579380 MAGI1Q96QZ7 1491 aaPredicted RBP34.14■■■■□ 3.06
MRPS23-203ENST00000579380 CHD1O14646 1710 aa34.13■■■■□ 3.05
MRPS23-203ENST00000579380 FBLN2P98095 1184 aa34.11■■■■□ 3.05
MRPS23-203ENST00000579380 PBRM1Q86U86 1689 aa34.03■■■■□ 3.04
MRPS23-203ENST00000579380 SYNJ2O15056 1496 aa34.01■■■■□ 3.04
MRPS23-203ENST00000579380 CHMP7Q8WUX9 453 aaPredicted RBP34.01■■■■□ 3.03
MRPS23-203ENST00000579380 RIMBP3CA6NJZ7 1639 aa33.89■■■■□ 3.02
MRPS23-203ENST00000579380 RIMBP3BA6NNM3 1639 aa33.89■■■■□ 3.02
MRPS23-203ENST00000579380 RIMBP3Q9UFD9 1639 aa33.89■■■■□ 3.02
MRPS23-203ENST00000579380 ARHGEF11O15085 1522 aa33.89■■■■□ 3.02
MRPS23-203ENST00000579380 TRIM41Q8WV44 630 aa33.86■■■■□ 3.01
MRPS23-203ENST00000579380 ERICH3Q5RHP9 1530 aa33.85■■■■□ 3.01
MRPS23-203ENST00000579380 CLASP1Q7Z460 1538 aa33.85■■■■□ 3.01
MRPS23-203ENST00000579380 ADAMTS12P58397 1594 aa33.81■■■■□ 3
MRPS23-203ENST00000579380 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
MRPS23-203ENST00000579380 GRIN2AQ12879 1464 aa33.76■■■■□ 3
MRPS23-203ENST00000579380 NUP160Q12769 1436 aa33.68■■■□□ 2.98
MRPS23-203ENST00000579380 KIF27Q86VH2 1401 aa33.67■■■□□ 2.98
MRPS23-203ENST00000579380 IGF1RP08069 1367 aa33.65■■■□□ 2.98
MRPS23-203ENST00000579380 ARAP1Q96P48 1450 aa33.62■■■□□ 2.97
MRPS23-203ENST00000579380 CEP170Q5SW79 1584 aa33.6■■■□□ 2.97
MRPS23-203ENST00000579380 CYB5RLQ6IPT4 315 aa33.6■■■□□ 2.97
MRPS23-203ENST00000579380 CUL7Q14999 1698 aa33.43■■■□□ 2.94
MRPS23-203ENST00000579380 SHROOM2Q13796 1616 aa33.4■■■□□ 2.94
MRPS23-203ENST00000579380 CARMIL1Q5VZK9 1371 aa33.39■■■□□ 2.94
MRPS23-203ENST00000579380 ERCC6L2Q5T890 1561 aa33.37■■■□□ 2.93
MRPS23-203ENST00000579380 RUSC2Q8N2Y8 1516 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms