RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 NISCHQ9Y2I1 1504 aa44.75■■■■■ 4.76
VAT1-208ENST00000590924 CCDC180Q9P1Z9 1646 aa40.24■■■■■ 4.03
VAT1-208ENST00000590924 ABCC9O60706 1549 aa39.9■■■■□ 3.98
VAT1-208ENST00000590924 RB1CC1Q8TDY2 1594 aa38.15■■■■□ 3.7
VAT1-208ENST00000590924 NACADO15069 1562 aa37.93■■■■□ 3.66
VAT1-208ENST00000590924 DCAF8L2P0C7V8 631 aa37.51■■■■□ 3.6
VAT1-208ENST00000590924 MYO15BQ96JP2 1530 aa37.48■■■■□ 3.59
VAT1-208ENST00000590924 UNC13AQ9UPW8 1703 aa37.44■■■■□ 3.58
VAT1-208ENST00000590924 DNAJC5BQ9UF47 199 aa37.23■■■■□ 3.55
VAT1-208ENST00000590924 ZCCHC6Q5VYS8 1495 aaKnown RBP37.14■■■■□ 3.54
VAT1-208ENST00000590924 PABPN1Q86U42 306 aaKnown RBP eCLIP37.08■■■■□ 3.53
VAT1-208ENST00000590924 DCAF1Q9Y4B6 1507 aa37.04■■■■□ 3.52
VAT1-208ENST00000590924 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
VAT1-208ENST00000590924 SHROOM4Q9ULL8 1493 aa36.58■■■■□ 3.45
VAT1-208ENST00000590924 SCRIBQ14160 1630 aa36.56■■■■□ 3.44
VAT1-208ENST00000590924 CC2D2AQ9P2K1 1620 aa36.15■■■■□ 3.38
VAT1-208ENST00000590924 EIF4G1Q04637 1599 aaKnown RBP36.1■■■■□ 3.37
VAT1-208ENST00000590924 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
VAT1-208ENST00000590924 NCAPD3P42695 1498 aa34.96■■■■□ 3.19
VAT1-208ENST00000590924 SMARCA4P51532 1647 aa34.94■■■■□ 3.18
VAT1-208ENST00000590924 ATAD2BQ9ULI0 1458 aa34.86■■■■□ 3.17
VAT1-208ENST00000590924 SMARCA2P51531 1590 aa34.83■■■■□ 3.17
VAT1-208ENST00000590924 HMGXB3Q12766 1538 aa34.78■■■■□ 3.16
VAT1-208ENST00000590924 BAZ1AQ9NRL2 1556 aaPredicted RBP34.76■■■■□ 3.16
VAT1-208ENST00000590924 PEG3Q9GZU2 1588 aa34.62■■■■□ 3.13
VAT1-208ENST00000590924 BAZ1BQ9UIG0 1483 aaKnown RBP34.54■■■■□ 3.12
VAT1-208ENST00000590924 MROH2BQ7Z745 1585 aa34.46■■■■□ 3.11
VAT1-208ENST00000590924 ERCC6Q03468 1493 aa34.45■■■■□ 3.1
VAT1-208ENST00000590924 CUX2O14529 1486 aa34.4■■■■□ 3.1
VAT1-208ENST00000590924 NESP48681 1621 aa34.33■■■■□ 3.09
VAT1-208ENST00000590924 LAMC3Q9Y6N6 1575 aa34.22■■■■□ 3.07
VAT1-208ENST00000590924 DNAJC5Q9H3Z4 198 aa34.12■■■■□ 3.05
VAT1-208ENST00000590924 WIZO95785 1651 aa34.12■■■■□ 3.05
VAT1-208ENST00000590924 THOC2Q8NI27 1593 aaKnown RBP34.07■■■■□ 3.05
VAT1-208ENST00000590924 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
VAT1-208ENST00000590924 PDS5BQ9NTI5 1447 aa33.92■■■■□ 3.02
VAT1-208ENST00000590924 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
VAT1-208ENST00000590924 RSF1Q96T23 1441 aaPredicted RBP33.77■■■■□ 3
VAT1-208ENST00000590924 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
VAT1-208ENST00000590924 MRC2Q9UBG0 1479 aa33.65■■■□□ 2.98
VAT1-208ENST00000590924 WDR62O43379 1518 aa33.6■■■□□ 2.97
VAT1-208ENST00000590924 CEP164Q9UPV0 1460 aa33.55■■■□□ 2.96
VAT1-208ENST00000590924 CFTRP13569 1480 aa33.54■■■□□ 2.96
VAT1-208ENST00000590924 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
VAT1-208ENST00000590924 PRDM2Q13029 1718 aa33.46■■■□□ 2.95
VAT1-208ENST00000590924 CCDC88BA6NC98 1476 aa33.24■■■□□ 2.91
VAT1-208ENST00000590924 URB2Q14146 1524 aaKnown RBP33.23■■■□□ 2.91
VAT1-208ENST00000590924 TOPBP1Q92547 1522 aa32.91■■■□□ 2.86
VAT1-208ENST00000590924 ABCC8Q09428 1581 aa32.87■■■□□ 2.85
VAT1-208ENST00000590924 IFT140Q96RY7 1462 aa32.86■■■□□ 2.85
VAT1-208ENST00000590924 DNMBPQ6XZF7 1577 aa32.83■■■□□ 2.85
VAT1-208ENST00000590924 ZNF608Q9ULD9 1512 aaPredicted RBP32.77■■■□□ 2.84
VAT1-208ENST00000590924 OSCARQ8IYS5 282 aa32.74■■■□□ 2.83
VAT1-208ENST00000590924 EIF4G3O43432 1585 aaKnown RBP32.69■■■□□ 2.82
VAT1-208ENST00000590924 TARBP1Q13395 1621 aaKnown RBP32.66■■■□□ 2.82
VAT1-208ENST00000590924 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
VAT1-208ENST00000590924 POLA1P09884 1462 aaPredicted RBP32.57■■■□□ 2.8
VAT1-208ENST00000590924 CHD1O14646 1710 aa32.48■■■□□ 2.79
VAT1-208ENST00000590924 AQRO60306 1485 aaKnown RBP eCLIP32.45■■■□□ 2.797e-15■■■■□ 21.7
VAT1-208ENST00000590924 RIMBP3CA6NJZ7 1639 aa32.44■■■□□ 2.78
VAT1-208ENST00000590924 RIMBP3BA6NNM3 1639 aa32.44■■■□□ 2.78
VAT1-208ENST00000590924 RIMBP3Q9UFD9 1639 aa32.44■■■□□ 2.78
VAT1-208ENST00000590924 RAD54L2Q9Y4B4 1467 aa32.4■■■□□ 2.78
VAT1-208ENST00000590924 CUX1P39880 1505 aa32.39■■■□□ 2.78
VAT1-208ENST00000590924 WDR97A6NE52 1622 aa32.39■■■□□ 2.78
VAT1-208ENST00000590924 FGD5Q6ZNL6 1462 aa32.38■■■□□ 2.77
VAT1-208ENST00000590924 SOGA1O94964 1423 aa32.37■■■□□ 2.77
VAT1-208ENST00000590924 ARHGEF11O15085 1522 aa32.31■■■□□ 2.76
VAT1-208ENST00000590924 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.75
VAT1-208ENST00000590924 TDRD9Q8NDG6 1382 aaKnown RBP32.26■■■□□ 2.75
VAT1-208ENST00000590924 SNAPC4Q5SXM2 1469 aa32.17■■■□□ 2.74
VAT1-208ENST00000590924 PBRM1Q86U86 1689 aa32.15■■■□□ 2.74
VAT1-208ENST00000590924 FBLN2P98095 1184 aa32.14■■■□□ 2.74
VAT1-208ENST00000590924 MAGI1Q96QZ7 1491 aaPredicted RBP32.14■■■□□ 2.74
VAT1-208ENST00000590924 GRIN2BQ13224 1484 aa32.12■■■□□ 2.73
VAT1-208ENST00000590924 ABCA10Q8WWZ4 1543 aa32.05■■■□□ 2.72
VAT1-208ENST00000590924 ABCA5Q8WWZ7 1642 aa32.04■■■□□ 2.72
VAT1-208ENST00000590924 CLASP1Q7Z460 1538 aa32.04■■■□□ 2.72
VAT1-208ENST00000590924 SYNJ1O43426 1573 aa32.03■■■□□ 2.72
VAT1-208ENST00000590924 GAPVD1Q14C86 1478 aa32.02■■■□□ 2.72
VAT1-208ENST00000590924 SYNJ2O15056 1496 aa32.01■■■□□ 2.71
VAT1-208ENST00000590924 BIVM-ERCC5R4GMW8 1640 aa32■■■□□ 2.71
VAT1-208ENST00000590924 ARAP1Q96P48 1450 aa31.99■■■□□ 2.71
VAT1-208ENST00000590924 CHMP7Q8WUX9 453 aaPredicted RBP31.96■■■□□ 2.71
VAT1-208ENST00000590924 TOP2BQ02880 1626 aa31.96■■■□□ 2.71
VAT1-208ENST00000590924 CYB5RLQ6IPT4 315 aa31.94■■■□□ 2.7
VAT1-208ENST00000590924 WRNQ14191 1432 aaPredicted RBP eCLIP31.9■■■□□ 2.7
VAT1-208ENST00000590924 ADAMTS12P58397 1594 aa31.77■■■□□ 2.68
VAT1-208ENST00000590924 GRIN2AQ12879 1464 aa31.72■■■□□ 2.67
VAT1-208ENST00000590924 ERICH3Q5RHP9 1530 aa31.67■■■□□ 2.66
VAT1-208ENST00000590924 CEP170Q5SW79 1584 aa31.64■■■□□ 2.65
VAT1-208ENST00000590924 FHAD1B1AJZ9 1412 aa31.61■■■□□ 2.65
VAT1-208ENST00000590924 NUP160Q12769 1436 aa31.61■■■□□ 2.65
VAT1-208ENST00000590924 SHROOM2Q13796 1616 aa31.54■■■□□ 2.64
VAT1-208ENST00000590924 TRHP20396 242 aaPredicted RBP31.53■■■□□ 2.64
VAT1-208ENST00000590924 ERCC6L2Q5T890 1561 aa31.51■■■□□ 2.63
VAT1-208ENST00000590924 RUSC2Q8N2Y8 1516 aa31.34■■■□□ 2.61
VAT1-208ENST00000590924 CUL7Q14999 1698 aa31.29■■■□□ 2.6
VAT1-208ENST00000590924 KIF27Q86VH2 1401 aa31.25■■■□□ 2.59
VAT1-208ENST00000590924 PRG4Q92954 1404 aaPredicted RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms