RNA–Protein interactions for RNA: ENST00000394886.6

CDC23-202, Transcript of cell division cycle 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC23, Length 3,155 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-202ENST00000394886 NISCHQ9Y2I1 1504 aa10.24□□□□□ -0.77
CDC23-202ENST00000394886 CCDC180Q9P1Z9 1646 aa8.78□□□□□ -1
CDC23-202ENST00000394886 DCAF8L2P0C7V8 631 aa8.76□□□□□ -1.01
CDC23-202ENST00000394886 PPARGC1BQ86YN6 1023 aaKnown RBP8.7□□□□□ -1.02
CDC23-202ENST00000394886 SHROOM4Q9ULL8 1493 aa8.65□□□□□ -1.02
CDC23-202ENST00000394886 HRCP23327 699 aa8.61□□□□□ -1.03
CDC23-202ENST00000394886 PCGF6Q9BYE7 350 aa8.59□□□□□ -1.03
CDC23-202ENST00000394886 ZCCHC6Q5VYS8 1495 aaKnown RBP8.58□□□□□ -1.04
CDC23-202ENST00000394886 ABCC9O60706 1549 aa8.53□□□□□ -1.04
CDC23-202ENST00000394886 SUPT5HO00267 1087 aaKnown RBP8.48□□□□□ -1.05
CDC23-202ENST00000394886 PELP1Q8IZL8 1130 aaKnown RBP8.45□□□□□ -1.06
CDC23-202ENST00000394886 DCAF1Q9Y4B6 1507 aa8.34□□□□□ -1.07
CDC23-202ENST00000394886 SCAF1Q9H7N4 1312 aaKnown RBP8.34□□□□□ -1.08
CDC23-202ENST00000394886 SCRIBQ14160 1630 aa8.28□□□□□ -1.08
CDC23-202ENST00000394886 NACADO15069 1562 aa8.22□□□□□ -1.09
CDC23-202ENST00000394886 MYO15BQ96JP2 1530 aa8.19□□□□□ -1.1
CDC23-202ENST00000394886 RB1CC1Q8TDY2 1594 aa8.17□□□□□ -1.1
CDC23-202ENST00000394886 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
CDC23-202ENST00000394886 PABPN1Q86U42 306 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDC23-202ENST00000394886 EHMT2Q96KQ7 1210 aa8.14□□□□□ -1.11
CDC23-202ENST00000394886 CHIC1Q5VXU3 224 aa8.12□□□□□ -1.11
CDC23-202ENST00000394886 MYT1Q01538 1121 aa8.11□□□□□ -1.11
CDC23-202ENST00000394886 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
CDC23-202ENST00000394886 NEUROD1Q13562 356 aa8.08□□□□□ -1.12
CDC23-202ENST00000394886 CECR2Q9BXF3 1484 aa8.06□□□□□ -1.12
CDC23-202ENST00000394886 UNC13AQ9UPW8 1703 aa8.04□□□□□ -1.12
CDC23-202ENST00000394886 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
CDC23-202ENST00000394886 TRIM26Q12899 539 aaPredicted RBP8.03□□□□□ -1.12
CDC23-202ENST00000394886 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
CDC23-202ENST00000394886 RSF1Q96T23 1441 aaPredicted RBP8.01□□□□□ -1.13
CDC23-202ENST00000394886 MROH2BQ7Z745 1585 aa7.97□□□□□ -1.13
CDC23-202ENST00000394886 BICRAQ9NZM4 1560 aa7.96□□□□□ -1.13
CDC23-202ENST00000394886 FAM9AQ8IZU1 332 aaPredicted RBP7.95□□□□□ -1.14
CDC23-202ENST00000394886 CENPBP07199 599 aaPredicted RBP7.94□□□□□ -1.14
CDC23-202ENST00000394886 ZEB1P37275 1124 aaPredicted RBP7.94□□□□□ -1.14
CDC23-202ENST00000394886 TTBK1Q5TCY1 1321 aaPredicted RBP7.93□□□□□ -1.14
CDC23-202ENST00000394886 WIZO95785 1651 aa7.92□□□□□ -1.14
CDC23-202ENST00000394886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.9□□□□□ -1.14
CDC23-202ENST00000394886 BAZ1AQ9NRL2 1556 aaPredicted RBP7.87□□□□□ -1.15
CDC23-202ENST00000394886 CCER1Q8TC90 406 aaPredicted RBP7.87□□□□□ -1.15
CDC23-202ENST00000394886 DIEXFQ68CQ4 756 aaKnown RBP7.87□□□□□ -1.15
CDC23-202ENST00000394886 SMARCA4P51532 1647 aa7.85□□□□□ -1.15
CDC23-202ENST00000394886 BCL11AQ9H165 835 aa7.84□□□□□ -1.15
CDC23-202ENST00000394886 TRIM41Q8WV44 630 aa7.76□□□□□ -1.17
CDC23-202ENST00000394886 CCDC88BA6NC98 1476 aa7.75□□□□□ -1.17
CDC23-202ENST00000394886 TOP2AP11388 1531 aaKnown RBP7.75□□□□□ -1.17
CDC23-202ENST00000394886 ATAD2BQ9ULI0 1458 aa7.74□□□□□ -1.17
CDC23-202ENST00000394886 EIF4G1Q04637 1599 aaKnown RBP7.72□□□□□ -1.17
CDC23-202ENST00000394886 BAZ1BQ9UIG0 1483 aaKnown RBP7.71□□□□□ -1.17
CDC23-202ENST00000394886 SMARCA2P51531 1590 aa7.71□□□□□ -1.18
CDC23-202ENST00000394886 BCANQ96GW7 911 aa7.69□□□□□ -1.18
CDC23-202ENST00000394886 CSRNP3Q8WYN3 585 aa7.68□□□□□ -1.18
CDC23-202ENST00000394886 MIER1Q8N108 512 aa7.67□□□□□ -1.18
CDC23-202ENST00000394886 PEG3Q9GZU2 1588 aa7.67□□□□□ -1.18
CDC23-202ENST00000394886 ANP32EQ9BTT0 268 aa7.65□□□□□ -1.18
CDC23-202ENST00000394886 ABCC8Q09428 1581 aa7.65□□□□□ -1.18
CDC23-202ENST00000394886 DNAJC5BQ9UF47 199 aa7.63□□□□□ -1.19
CDC23-202ENST00000394886 NCAPD3P42695 1498 aa7.63□□□□□ -1.19
CDC23-202ENST00000394886 CC2D2AQ9P2K1 1620 aa7.63□□□□□ -1.19
CDC23-202ENST00000394886 PRKCSHP14314 528 aaPredicted RBP7.62□□□□□ -1.19
CDC23-202ENST00000394886 ZNF316A6NFI3 1004 aaPredicted RBP7.6□□□□□ -1.19
CDC23-202ENST00000394886 TSHZ2Q9NRE2 1034 aa7.57□□□□□ -1.2
CDC23-202ENST00000394886 HMGXB3Q12766 1538 aa7.57□□□□□ -1.2
CDC23-202ENST00000394886 SUPT16HQ9Y5B9 1047 aaKnown RBP7.56□□□□□ -1.2
CDC23-202ENST00000394886 WRNQ14191 1432 aaPredicted RBP eCLIP7.54□□□□□ -1.2
CDC23-202ENST00000394886 SOGA1O94964 1423 aa7.53□□□□□ -1.2
CDC23-202ENST00000394886 HNRNPUL2Q1KMD3 747 aaKnown RBP7.53□□□□□ -1.2
CDC23-202ENST00000394886 RUSC2Q8N2Y8 1516 aa7.52□□□□□ -1.2
CDC23-202ENST00000394886 ITGAEP38570 1179 aa7.5□□□□□ -1.21
CDC23-202ENST00000394886 SYNJ1O43426 1573 aa7.5□□□□□ -1.21
CDC23-202ENST00000394886 NESP48681 1621 aa7.5□□□□□ -1.21
CDC23-202ENST00000394886 ERICH6Q7L0X2 663 aa7.49□□□□□ -1.21
CDC23-202ENST00000394886 CADPSQ9ULU8 1353 aa7.49□□□□□ -1.21
CDC23-202ENST00000394886 CFTRP13569 1480 aa7.49□□□□□ -1.21
CDC23-202ENST00000394886 UBTFP17480 764 aaKnown RBP7.47□□□□□ -1.21
CDC23-202ENST00000394886 RANGAP1P46060 587 aaPredicted RBP7.47□□□□□ -1.21
CDC23-202ENST00000394886 FKBP8Q14318 412 aa7.45□□□□□ -1.22
CDC23-202ENST00000394886 CUX1P39880 1505 aa7.43□□□□□ -1.22
CDC23-202ENST00000394886 ANO8Q9HCE9 1232 aaPredicted RBP7.42□□□□□ -1.22
CDC23-202ENST00000394886 FANCD2Q9BXW9 1451 aa7.42□□□□□ -1.22
CDC23-202ENST00000394886 CCDC136Q96JN2 1154 aa7.41□□□□□ -1.22
CDC23-202ENST00000394886 KCNH8Q96L42 1107 aa7.41□□□□□ -1.22
CDC23-202ENST00000394886 TOP2BQ02880 1626 aa7.4□□□□□ -1.22
CDC23-202ENST00000394886 RBM19Q9Y4C8 960 aaKnown RBP7.4□□□□□ -1.22
CDC23-202ENST00000394886 RTN4Q9NQC3 1192 aaKnown RBP7.38□□□□□ -1.23
CDC23-202ENST00000394886 NEFLP07196 543 aa7.37□□□□□ -1.23
CDC23-202ENST00000394886 BIVM-ERCC5R4GMW8 1640 aa7.37□□□□□ -1.23
CDC23-202ENST00000394886 IRX6P78412 446 aaPredicted RBP7.36□□□□□ -1.23
CDC23-202ENST00000394886 NBR1Q14596 966 aa7.36□□□□□ -1.23
CDC23-202ENST00000394886 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
CDC23-202ENST00000394886 EEA1Q15075 1411 aa7.36□□□□□ -1.23
CDC23-202ENST00000394886 RAD54L2Q9Y4B4 1467 aa7.36□□□□□ -1.23
CDC23-202ENST00000394886 PRDM2Q13029 1718 aa7.36□□□□□ -1.23
CDC23-202ENST00000394886 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.35□□□□□ -1.23
CDC23-202ENST00000394886 CUX2O14529 1486 aa7.35□□□□□ -1.23
CDC23-202ENST00000394886 CEP164Q9UPV0 1460 aa7.35□□□□□ -1.23
CDC23-202ENST00000394886 RAPGEF2Q9Y4G8 1499 aa7.34□□□□□ -1.23
CDC23-202ENST00000394886 MSH5O43196 834 aa7.34□□□□□ -1.23
CDC23-202ENST00000394886 PDS5BQ9NTI5 1447 aa7.34□□□□□ -1.23
CDC23-202ENST00000394886 TRIM52Q96A61 297 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms