RNA–Protein interactions for RNA: ENST00000371989.7

SURF4-202, Transcript of surfeit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SURF4, Length 2,984 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-202ENST00000371989 NISCHQ9Y2I1 1504 aa32.17■■■□□ 2.74
SURF4-202ENST00000371989 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.1
SURF4-202ENST00000371989 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
SURF4-202ENST00000371989 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
SURF4-202ENST00000371989 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
SURF4-202ENST00000371989 CCDC180Q9P1Z9 1646 aa27.02■■□□□ 1.92
SURF4-202ENST00000371989 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
SURF4-202ENST00000371989 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.87
SURF4-202ENST00000371989 PCGF6Q9BYE7 350 aa26.38■■□□□ 1.81
SURF4-202ENST00000371989 HRCP23327 699 aa26.29■■□□□ 1.8
SURF4-202ENST00000371989 LOC105371045A0A1W2PR82 267 aa26.21■■□□□ 1.79
SURF4-202ENST00000371989 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
SURF4-202ENST00000371989 PPARGC1BQ86YN6 1023 aaKnown RBP25.99■■□□□ 1.75
SURF4-202ENST00000371989 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
SURF4-202ENST00000371989 ABCC9O60706 1549 aa25.69■■□□□ 1.7
SURF4-202ENST00000371989 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
SURF4-202ENST00000371989 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
SURF4-202ENST00000371989 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
SURF4-202ENST00000371989 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
SURF4-202ENST00000371989 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
SURF4-202ENST00000371989 RB1CC1Q8TDY2 1594 aa25.43■■□□□ 1.66
SURF4-202ENST00000371989 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
SURF4-202ENST00000371989 MROH2BQ7Z745 1585 aa25.13■■□□□ 1.61
SURF4-202ENST00000371989 NACADO15069 1562 aa25.04■■□□□ 1.6
SURF4-202ENST00000371989 ZEB1P37275 1124 aaPredicted RBP25.03■■□□□ 1.6
SURF4-202ENST00000371989 WIZO95785 1651 aa25.02■■□□□ 1.6
SURF4-202ENST00000371989 TTBK1Q5TCY1 1321 aaPredicted RBP24.87■■□□□ 1.57
SURF4-202ENST00000371989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.77■■□□□ 1.56
SURF4-202ENST00000371989 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
SURF4-202ENST00000371989 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
SURF4-202ENST00000371989 ABCC8Q09428 1581 aa24.64■■□□□ 1.54
SURF4-202ENST00000371989 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
SURF4-202ENST00000371989 EIF4G1Q04637 1599 aaKnown RBP24.51■■□□□ 1.51
SURF4-202ENST00000371989 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
SURF4-202ENST00000371989 UBTFP17480 764 aaKnown RBP24.48■■□□□ 1.51
SURF4-202ENST00000371989 TOP2AP11388 1531 aaKnown RBP24.48■■□□□ 1.51
SURF4-202ENST00000371989 SOGA1O94964 1423 aa24.46■■□□□ 1.51
SURF4-202ENST00000371989 SCAF1Q9H7N4 1312 aaKnown RBP24.46■■□□□ 1.51
SURF4-202ENST00000371989 SMARCA4P51532 1647 aa24.45■■□□□ 1.5
SURF4-202ENST00000371989 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
SURF4-202ENST00000371989 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
SURF4-202ENST00000371989 CSRNP3Q8WYN3 585 aa24.35■■□□□ 1.49
SURF4-202ENST00000371989 RUSC2Q8N2Y8 1516 aa24.34■■□□□ 1.49
SURF4-202ENST00000371989 UNC13AQ9UPW8 1703 aa24.29■■□□□ 1.48
SURF4-202ENST00000371989 TNIKQ9UKE5 1360 aa24.24■■□□□ 1.47
SURF4-202ENST00000371989 DIEXFQ68CQ4 756 aaKnown RBP24.24■■□□□ 1.47
SURF4-202ENST00000371989 RANGAP1P46060 587 aaPredicted RBP24.22■■□□□ 1.47
SURF4-202ENST00000371989 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
SURF4-202ENST00000371989 NEUROD1Q13562 356 aa24.14■■□□□ 1.45
SURF4-202ENST00000371989 HNRNPUL2Q1KMD3 747 aaKnown RBP24.13■■□□□ 1.45
SURF4-202ENST00000371989 EEA1Q15075 1411 aa24.1■■□□□ 1.45
SURF4-202ENST00000371989 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
SURF4-202ENST00000371989 GOLGA3Q08378 1498 aa24.08■■□□□ 1.45
SURF4-202ENST00000371989 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
SURF4-202ENST00000371989 CENPBP07199 599 aaPredicted RBP23.96■■□□□ 1.43
SURF4-202ENST00000371989 APLP2Q06481 763 aa23.95■■□□□ 1.42
SURF4-202ENST00000371989 GTF3C3Q9Y5Q9 886 aa23.95■■□□□ 1.42
SURF4-202ENST00000371989 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
SURF4-202ENST00000371989 SYNJ1O43426 1573 aa23.94■■□□□ 1.42
SURF4-202ENST00000371989 YTHDC1Q96MU7 727 aaKnown RBP23.93■■□□□ 1.42
SURF4-202ENST00000371989 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
SURF4-202ENST00000371989 CLIP1P30622 1438 aa23.92■■□□□ 1.42
SURF4-202ENST00000371989 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
SURF4-202ENST00000371989 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
SURF4-202ENST00000371989 ATAD2BQ9ULI0 1458 aa23.83■■□□□ 1.41
SURF4-202ENST00000371989 RAPGEF2Q9Y4G8 1499 aa23.81■■□□□ 1.4
SURF4-202ENST00000371989 PEG3Q9GZU2 1588 aa23.77■■□□□ 1.4
SURF4-202ENST00000371989 VPS8Q8N3P4 1428 aa23.75■■□□□ 1.39
SURF4-202ENST00000371989 KIF21BO75037 1637 aa23.74■■□□□ 1.39
SURF4-202ENST00000371989 MIER1Q8N108 512 aa23.71■■□□□ 1.39
SURF4-202ENST00000371989 KANK4Q5T7N3 995 aaPredicted RBP23.54■■□□□ 1.36
SURF4-202ENST00000371989 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
SURF4-202ENST00000371989 ITGAEP38570 1179 aa23.51■■□□□ 1.35
SURF4-202ENST00000371989 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
SURF4-202ENST00000371989 PRXQ9BXM0 1461 aa23.38■■□□□ 1.33
SURF4-202ENST00000371989 DHX57Q6P158 1386 aaKnown RBP23.37■■□□□ 1.33
SURF4-202ENST00000371989 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
SURF4-202ENST00000371989 CUX1P39880 1505 aa23.35■■□□□ 1.33
SURF4-202ENST00000371989 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
SURF4-202ENST00000371989 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
SURF4-202ENST00000371989 NCAPD3P42695 1498 aa23.23■■□□□ 1.31
SURF4-202ENST00000371989 ATP1B4Q9UN42 357 aaPredicted RBP23.22■■□□□ 1.31
SURF4-202ENST00000371989 CLSPNQ9HAW4 1339 aa23.21■■□□□ 1.31
SURF4-202ENST00000371989 CCNB3Q8WWL7 1395 aa23.2■■□□□ 1.3
SURF4-202ENST00000371989 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
SURF4-202ENST00000371989 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
SURF4-202ENST00000371989 HMGXB3Q12766 1538 aa23.17■■□□□ 1.3
SURF4-202ENST00000371989 CUX2O14529 1486 aa23.16■■□□□ 1.3
SURF4-202ENST00000371989 RRBP1Q9P2E9 1410 aaKnown RBP23.15■■□□□ 1.3
SURF4-202ENST00000371989 CFTRP13569 1480 aa23.15■■□□□ 1.3
SURF4-202ENST00000371989 FAM50AQ14320 339 aaKnown RBP23.11■■□□□ 1.29
SURF4-202ENST00000371989 IGF1RP08069 1367 aa23.08■■□□□ 1.28
SURF4-202ENST00000371989 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
SURF4-202ENST00000371989 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
SURF4-202ENST00000371989 KCNH8Q96L42 1107 aa23■■□□□ 1.27
SURF4-202ENST00000371989 SIN3AQ96ST3 1273 aa22.99■■□□□ 1.27
SURF4-202ENST00000371989 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
SURF4-202ENST00000371989 CADPSQ9ULU8 1353 aa22.94■■□□□ 1.26
SURF4-202ENST00000371989 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
SURF4-202ENST00000371989 SUPT16HQ9Y5B9 1047 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms