RNA–Protein interactions for RNA: ENST00000590977.5

EFTUD2-219, Transcript of elongation factor Tu GTP binding domain containing 2, humanhuman

TSL 2

Gene EFTUD2, Length 2,422 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFTUD2-219ENST00000590977 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.84
EFTUD2-219ENST00000590977 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.4
EFTUD2-219ENST00000590977 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
EFTUD2-219ENST00000590977 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
EFTUD2-219ENST00000590977 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
EFTUD2-219ENST00000590977 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
EFTUD2-219ENST00000590977 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
EFTUD2-219ENST00000590977 ABCC9O60706 1549 aa16.44■□□□□ 0.22
EFTUD2-219ENST00000590977 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
EFTUD2-219ENST00000590977 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
EFTUD2-219ENST00000590977 NACADO15069 1562 aa16.28■□□□□ 0.2
EFTUD2-219ENST00000590977 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
EFTUD2-219ENST00000590977 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
EFTUD2-219ENST00000590977 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
EFTUD2-219ENST00000590977 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
EFTUD2-219ENST00000590977 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
EFTUD2-219ENST00000590977 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
EFTUD2-219ENST00000590977 WIZO95785 1651 aa15.7■□□□□ 0.1
EFTUD2-219ENST00000590977 BICRAQ9NZM4 1560 aa15.65■□□□□ 0.1
EFTUD2-219ENST00000590977 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
EFTUD2-219ENST00000590977 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.098e-8■□□□□ 11.2
EFTUD2-219ENST00000590977 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
EFTUD2-219ENST00000590977 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
EFTUD2-219ENST00000590977 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
EFTUD2-219ENST00000590977 HRCP23327 699 aa15.39■□□□□ 0.05
EFTUD2-219ENST00000590977 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
EFTUD2-219ENST00000590977 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
EFTUD2-219ENST00000590977 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
EFTUD2-219ENST00000590977 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
EFTUD2-219ENST00000590977 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
EFTUD2-219ENST00000590977 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
EFTUD2-219ENST00000590977 ATAD2BQ9ULI0 1458 aa15.23■□□□□ 0.03
EFTUD2-219ENST00000590977 FAM9AQ8IZU1 332 aaPredicted RBP15.21■□□□□ 0.02
EFTUD2-219ENST00000590977 ABCC8Q09428 1581 aa15.18■□□□□ 0.02
EFTUD2-219ENST00000590977 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
EFTUD2-219ENST00000590977 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
EFTUD2-219ENST00000590977 MYT1Q01538 1121 aa15.06■□□□□ 0
EFTUD2-219ENST00000590977 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
EFTUD2-219ENST00000590977 HMGXB3Q12766 1538 aa15□□□□□ -0.01
EFTUD2-219ENST00000590977 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
EFTUD2-219ENST00000590977 SOGA1O94964 1423 aa14.94□□□□□ -0.02
EFTUD2-219ENST00000590977 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
EFTUD2-219ENST00000590977 SYNJ1O43426 1573 aa14.93□□□□□ -0.02
EFTUD2-219ENST00000590977 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
EFTUD2-219ENST00000590977 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
EFTUD2-219ENST00000590977 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
EFTUD2-219ENST00000590977 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
EFTUD2-219ENST00000590977 EEA1Q15075 1411 aa14.8□□□□□ -0.04
EFTUD2-219ENST00000590977 TOP2BQ02880 1626 aa14.79□□□□□ -0.04
EFTUD2-219ENST00000590977 CFTRP13569 1480 aa14.78□□□□□ -0.04
EFTUD2-219ENST00000590977 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
EFTUD2-219ENST00000590977 TRIM26Q12899 539 aaPredicted RBP14.76□□□□□ -0.05
EFTUD2-219ENST00000590977 PRDM2Q13029 1718 aa14.74□□□□□ -0.05
EFTUD2-219ENST00000590977 CUX1P39880 1505 aa14.72□□□□□ -0.05
EFTUD2-219ENST00000590977 TNIKQ9UKE5 1360 aa14.7□□□□□ -0.06
EFTUD2-219ENST00000590977 CEP162Q5TB80 1403 aa14.69□□□□□ -0.06
EFTUD2-219ENST00000590977 GOLGA3Q08378 1498 aa14.68□□□□□ -0.06
EFTUD2-219ENST00000590977 UBTFP17480 764 aaKnown RBP14.68□□□□□ -0.06
EFTUD2-219ENST00000590977 CADPSQ9ULU8 1353 aa14.67□□□□□ -0.06
EFTUD2-219ENST00000590977 KIF21BO75037 1637 aa14.67□□□□□ -0.06
EFTUD2-219ENST00000590977 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
EFTUD2-219ENST00000590977 CEP164Q9UPV0 1460 aa14.64□□□□□ -0.07
EFTUD2-219ENST00000590977 RAPGEF2Q9Y4G8 1499 aa14.6□□□□□ -0.07
EFTUD2-219ENST00000590977 NESP48681 1621 aa14.56□□□□□ -0.08
EFTUD2-219ENST00000590977 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
EFTUD2-219ENST00000590977 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
EFTUD2-219ENST00000590977 KIF27Q86VH2 1401 aa14.52□□□□□ -0.09
EFTUD2-219ENST00000590977 PRXQ9BXM0 1461 aa14.52□□□□□ -0.09
EFTUD2-219ENST00000590977 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
EFTUD2-219ENST00000590977 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
EFTUD2-219ENST00000590977 CLIP1P30622 1438 aa14.49□□□□□ -0.09
EFTUD2-219ENST00000590977 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
EFTUD2-219ENST00000590977 ERICH3Q5RHP9 1530 aa14.48□□□□□ -0.09
EFTUD2-219ENST00000590977 TTBK1Q5TCY1 1321 aaPredicted RBP14.48□□□□□ -0.09
EFTUD2-219ENST00000590977 RANGAP1P46060 587 aaPredicted RBP14.46□□□□□ -0.09
EFTUD2-219ENST00000590977 CUX2O14529 1486 aa14.46□□□□□ -0.1
EFTUD2-219ENST00000590977 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
EFTUD2-219ENST00000590977 TOPBP1Q92547 1522 aa14.42□□□□□ -0.1
EFTUD2-219ENST00000590977 IGF1RP08069 1367 aa14.41□□□□□ -0.1
EFTUD2-219ENST00000590977 RAD54L2Q9Y4B4 1467 aa14.39□□□□□ -0.11
EFTUD2-219ENST00000590977 VPS8Q8N3P4 1428 aa14.39□□□□□ -0.11
EFTUD2-219ENST00000590977 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
EFTUD2-219ENST00000590977 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
EFTUD2-219ENST00000590977 KIF21AQ7Z4S6 1674 aa14.36□□□□□ -0.11
EFTUD2-219ENST00000590977 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
EFTUD2-219ENST00000590977 ARAP1Q96P48 1450 aa14.33□□□□□ -0.11
EFTUD2-219ENST00000590977 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.12
EFTUD2-219ENST00000590977 ABCA10Q8WWZ4 1543 aa14.33□□□□□ -0.12
EFTUD2-219ENST00000590977 WDR97A6NE52 1622 aa14.29□□□□□ -0.12
EFTUD2-219ENST00000590977 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.12
EFTUD2-219ENST00000590977 ACIN1Q9UKV3 1341 aaKnown RBP14.27□□□□□ -0.13
EFTUD2-219ENST00000590977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
EFTUD2-219ENST00000590977 APLP2Q06481 763 aa14.24□□□□□ -0.13
EFTUD2-219ENST00000590977 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
EFTUD2-219ENST00000590977 ABCA5Q8WWZ7 1642 aa14.21□□□□□ -0.14
EFTUD2-219ENST00000590977 CUL7Q14999 1698 aa14.2□□□□□ -0.14
EFTUD2-219ENST00000590977 MRC2Q9UBG0 1479 aa14.19□□□□□ -0.14
EFTUD2-219ENST00000590977 TARBP1Q13395 1621 aaKnown RBP14.19□□□□□ -0.14
EFTUD2-219ENST00000590977 KANK4Q5T7N3 995 aaPredicted RBP14.18□□□□□ -0.14
EFTUD2-219ENST00000590977 GAPVD1Q14C86 1478 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms