RNA–Protein interactions for RNA: ENST00000421012.1

MDH1-204, Transcript of malate dehydrogenase 1, humanhuman

TSL 4

Gene MDH1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-204ENST00000421012 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
MDH1-204ENST00000421012 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
MDH1-204ENST00000421012 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
MDH1-204ENST00000421012 SENP3Q9H4L4 574 aaPredicted RBP14.48□□□□□ -0.09
MDH1-204ENST00000421012 FOXD1Q16676 465 aa13.62□□□□□ -0.23
MDH1-204ENST00000421012 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
MDH1-204ENST00000421012 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
MDH1-204ENST00000421012 ADRA2BP18089 450 aa12.95□□□□□ -0.34
MDH1-204ENST00000421012 PIAS4Q8N2W9 510 aaPredicted RBP12.7□□□□□ -0.38
MDH1-204ENST00000421012 MSH5O43196 834 aa12.45□□□□□ -0.42
MDH1-204ENST00000421012 POTEDQ86YR6 584 aa12.36□□□□□ -0.43
MDH1-204ENST00000421012 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
MDH1-204ENST00000421012 PPP4R3CPQ6ZMV5 832 aa11.74□□□□□ -0.53
MDH1-204ENST00000421012 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
MDH1-204ENST00000421012 DMRT2Q9Y5R5 561 aa11.58□□□□□ -0.56
MDH1-204ENST00000421012 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
MDH1-204ENST00000421012 KCNA4P22459 653 aa11.3□□□□□ -0.6
MDH1-204ENST00000421012 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
MDH1-204ENST00000421012 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
MDH1-204ENST00000421012 NCBP3Q53F19 620 aaKnown RBP11.22□□□□□ -0.61
MDH1-204ENST00000421012 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
MDH1-204ENST00000421012 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
MDH1-204ENST00000421012 DNAJC5BQ9UF47 199 aa10.85□□□□□ -0.67
MDH1-204ENST00000421012 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
MDH1-204ENST00000421012 SLC4A2P04920 1241 aa10.71□□□□□ -0.69
MDH1-204ENST00000421012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.68□□□□□ -0.73e-7■■□□□ 11.8
MDH1-204ENST00000421012 SLC4A1APQ9BWU0 796 aaKnown RBP10.63□□□□□ -0.71
MDH1-204ENST00000421012 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
MDH1-204ENST00000421012 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
MDH1-204ENST00000421012 C1QBPQ07021 282 aaKnown RBP10.53□□□□□ -0.72
MDH1-204ENST00000421012 ZBTB22O15209 634 aa10.48□□□□□ -0.73
MDH1-204ENST00000421012 SPINK5Q9NQ38 1064 aaPredicted RBP10.4□□□□□ -0.74
MDH1-204ENST00000421012 FOXD4L1Q9NU39 408 aa10.35□□□□□ -0.75
MDH1-204ENST00000421012 MYCNP04198 464 aaPredicted RBP10.28□□□□□ -0.76
MDH1-204ENST00000421012 CAPN15O75808 1086 aa10.25□□□□□ -0.77
MDH1-204ENST00000421012 ATF5Q9Y2D1 282 aaPredicted RBP10.23□□□□□ -0.77
MDH1-204ENST00000421012 DSG3P32926 999 aa10.19□□□□□ -0.78
MDH1-204ENST00000421012 CSRNP3Q8WYN3 585 aa10.18□□□□□ -0.78
MDH1-204ENST00000421012 TRHP20396 242 aaPredicted RBP10.17□□□□□ -0.78
MDH1-204ENST00000421012 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
MDH1-204ENST00000421012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.16□□□□□ -0.78
MDH1-204ENST00000421012 HNRNPUL2Q1KMD3 747 aaKnown RBP10.16□□□□□ -0.78
MDH1-204ENST00000421012 EHMT2Q96KQ7 1210 aa10.16□□□□□ -0.78
MDH1-204ENST00000421012 ABCB7O75027 752 aa10.12□□□□□ -0.79
MDH1-204ENST00000421012 ZNF219Q9P2Y4 722 aaPredicted RBP10.07□□□□□ -0.8
MDH1-204ENST00000421012 APLP2Q06481 763 aa10.05□□□□□ -0.8
MDH1-204ENST00000421012 POLA2Q14181 598 aa9.98□□□□□ -0.81
MDH1-204ENST00000421012 ATXN8OSP0DMR3 200 aa9.95□□□□□ -0.82
MDH1-204ENST00000421012 MKRN4PQ13434 485 aaPredicted RBP9.74□□□□□ -0.85
MDH1-204ENST00000421012 OSCARQ8IYS5 282 aa9.67□□□□□ -0.86
MDH1-204ENST00000421012 POTEHQ6S545 545 aa9.62□□□□□ -0.87
MDH1-204ENST00000421012 ZBTB12Q9Y330 459 aaPredicted RBP9.62□□□□□ -0.87
MDH1-204ENST00000421012 FBLN2P98095 1184 aa9.55□□□□□ -0.88
MDH1-204ENST00000421012 RBM42Q9BTD8 480 aaKnown RBP9.53□□□□□ -0.88
MDH1-204ENST00000421012 AKT1S1Q96B36 256 aa9.45□□□□□ -0.9
MDH1-204ENST00000421012 SPDYE2BA6NHP3 402 aa9.44□□□□□ -0.9
MDH1-204ENST00000421012 SPDYE6P0CI01 402 aa9.44□□□□□ -0.9
MDH1-204ENST00000421012 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
MDH1-204ENST00000421012 REM2Q8IYK8 340 aaPredicted RBP9.43□□□□□ -0.9
MDH1-204ENST00000421012 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
MDH1-204ENST00000421012 ZNF692Q9BU19 519 aaPredicted RBP9.4□□□□□ -0.9
MDH1-204ENST00000421012 PITPNM1O00562 1244 aa9.35□□□□□ -0.91
MDH1-204ENST00000421012 CHRDL2Q6WN34 429 aa9.34□□□□□ -0.91
MDH1-204ENST00000421012 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
MDH1-204ENST00000421012 SPDYE4A6NLX3 237 aa9.29□□□□□ -0.92
MDH1-204ENST00000421012 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
MDH1-204ENST00000421012 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
MDH1-204ENST00000421012 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.94
MDH1-204ENST00000421012 SPDYE1Q8NFV5 336 aaPredicted RBP9.18□□□□□ -0.94
MDH1-204ENST00000421012 PROM2Q8N271 834 aa9.17□□□□□ -0.94
MDH1-204ENST00000421012 FKBP8Q14318 412 aa9.14□□□□□ -0.95
MDH1-204ENST00000421012 CHADLQ6NUI6 762 aa9.12□□□□□ -0.95
MDH1-204ENST00000421012 PRKAR2AP13861 404 aaKnown RBP9.08□□□□□ -0.96
MDH1-204ENST00000421012 PRR29P0C7W0 189 aa9.07□□□□□ -0.96
MDH1-204ENST00000421012 EVX2Q03828 476 aa9.02□□□□□ -0.97
MDH1-204ENST00000421012 CREBZFQ9NS37 354 aa9.02□□□□□ -0.97
MDH1-204ENST00000421012 STAG3Q9UJ98 1225 aa8.97□□□□□ -0.97
MDH1-204ENST00000421012 MNX1P50219 401 aaPredicted RBP8.94□□□□□ -0.98
MDH1-204ENST00000421012 HAX1O00165 279 aa8.92□□□□□ -0.98
MDH1-204ENST00000421012 FARP1Q9Y4F1 1045 aaPredicted RBP8.92□□□□□ -0.98
MDH1-204ENST00000421012 C19orf67A6NJJ6 358 aa8.89□□□□□ -0.99
MDH1-204ENST00000421012 SP7Q8TDD2 431 aaPredicted RBP8.88□□□□□ -0.99
MDH1-204ENST00000421012 MIER1Q8N108 512 aa8.82□□□□□ -1
MDH1-204ENST00000421012 CD44P16070 742 aaKnown RBP8.79□□□□□ -1
MDH1-204ENST00000421012 PLCD3Q8N3E9 789 aa8.75□□□□□ -1.01
MDH1-204ENST00000421012 VASPP50552 380 aaPredicted RBP8.73□□□□□ -1.01
MDH1-204ENST00000421012 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
MDH1-204ENST00000421012 RASEFQ8IZ41 740 aa8.71□□□□□ -1.02
MDH1-204ENST00000421012 ZRANB1Q9UGI0 708 aa8.71□□□□□ -1.02
MDH1-204ENST00000421012 GABBR2O75899 941 aa8.7□□□□□ -1.02
MDH1-204ENST00000421012 NPM1P06748 294 aaKnown RBP eCLIP8.69□□□□□ -1.02
MDH1-204ENST00000421012 NUBP1P53384 320 aa8.69□□□□□ -1.02
MDH1-204ENST00000421012 IFNLR1Q8IU57 520 aaPredicted RBP8.68□□□□□ -1.02
MDH1-204ENST00000421012 PHF12Q96QT6 1004 aa8.68□□□□□ -1.02
MDH1-204ENST00000421012 TSPYL2Q9H2G4 693 aaPredicted RBP8.68□□□□□ -1.02
MDH1-204ENST00000421012 ZNF579Q8NAF0 562 aaKnown RBP8.66□□□□□ -1.02
MDH1-204ENST00000421012 CCDC61Q9Y6R9 512 aa8.63□□□□□ -1.03
MDH1-204ENST00000421012 GALR2O43603 387 aaPredicted RBP8.62□□□□□ -1.03
MDH1-204ENST00000421012 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
MDH1-204ENST00000421012 POTEIP0CG38 1075 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms