RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 NISCHQ9Y2I1 1504 aa38.02■■■■□ 3.68
PCCB-212ENST00000474833 ABCC9O60706 1549 aa34.76■■■■□ 3.15
PCCB-212ENST00000474833 CCDC180Q9P1Z9 1646 aa34.34■■■■□ 3.09
PCCB-212ENST00000474833 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
PCCB-212ENST00000474833 RB1CC1Q8TDY2 1594 aa32.86■■■□□ 2.85
PCCB-212ENST00000474833 NACADO15069 1562 aa32.54■■■□□ 2.8
PCCB-212ENST00000474833 PABPN1Q86U42 306 aaKnown RBP eCLIP32.23■■■□□ 2.75
PCCB-212ENST00000474833 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
PCCB-212ENST00000474833 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
PCCB-212ENST00000474833 BICRAQ9NZM4 1560 aa32.05■■■□□ 2.72
PCCB-212ENST00000474833 MYO15BQ96JP2 1530 aa31.98■■■□□ 2.71
PCCB-212ENST00000474833 SHROOM4Q9ULL8 1493 aa31.5■■■□□ 2.63
PCCB-212ENST00000474833 ZCCHC6Q5VYS8 1495 aaKnown RBP31.44■■■□□ 2.62
PCCB-212ENST00000474833 CC2D2AQ9P2K1 1620 aa31.41■■■□□ 2.62
PCCB-212ENST00000474833 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.62
PCCB-212ENST00000474833 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
PCCB-212ENST00000474833 EIF4G1Q04637 1599 aaKnown RBP31.24■■■□□ 2.59
PCCB-212ENST00000474833 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
PCCB-212ENST00000474833 DNAJC5Q9H3Z4 198 aa30.65■■■□□ 2.5
PCCB-212ENST00000474833 CUX2O14529 1486 aa30.16■■■□□ 2.42
PCCB-212ENST00000474833 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
PCCB-212ENST00000474833 ERCC6Q03468 1493 aa29.97■■■□□ 2.39
PCCB-212ENST00000474833 ATAD2BQ9ULI0 1458 aa29.91■■■□□ 2.38
PCCB-212ENST00000474833 HMGXB3Q12766 1538 aa29.82■■■□□ 2.36
PCCB-212ENST00000474833 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
PCCB-212ENST00000474833 NESP48681 1621 aa29.77■■■□□ 2.36
PCCB-212ENST00000474833 SMARCA2P51531 1590 aa29.76■■■□□ 2.35
PCCB-212ENST00000474833 THOC2Q8NI27 1593 aaKnown RBP29.61■■■□□ 2.33
PCCB-212ENST00000474833 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
PCCB-212ENST00000474833 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
PCCB-212ENST00000474833 BAZ1AQ9NRL2 1556 aaPredicted RBP29.51■■■□□ 2.31
PCCB-212ENST00000474833 LAMC3Q9Y6N6 1575 aa29.44■■■□□ 2.3
PCCB-212ENST00000474833 KIF21AQ7Z4S6 1674 aa29.37■■■□□ 2.29
PCCB-212ENST00000474833 MROH2BQ7Z745 1585 aa29.3■■■□□ 2.28
PCCB-212ENST00000474833 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
PCCB-212ENST00000474833 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
PCCB-212ENST00000474833 WDR62O43379 1518 aa29.07■■■□□ 2.24
PCCB-212ENST00000474833 MRC2Q9UBG0 1479 aa29.07■■■□□ 2.24
PCCB-212ENST00000474833 TRIM41Q8WV44 630 aa29.02■■■□□ 2.24
PCCB-212ENST00000474833 WIZO95785 1651 aa28.91■■■□□ 2.22
PCCB-212ENST00000474833 CEP164Q9UPV0 1460 aa28.84■■■□□ 2.21
PCCB-212ENST00000474833 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
PCCB-212ENST00000474833 CFTRP13569 1480 aa28.7■■■□□ 2.18
PCCB-212ENST00000474833 URB2Q14146 1524 aaKnown RBP28.62■■■□□ 2.17
PCCB-212ENST00000474833 OSCARQ8IYS5 282 aa28.58■■■□□ 2.17
PCCB-212ENST00000474833 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
PCCB-212ENST00000474833 RSF1Q96T23 1441 aaPredicted RBP28.5■■■□□ 2.15
PCCB-212ENST00000474833 RIMBP3CA6NJZ7 1639 aa28.41■■■□□ 2.14
PCCB-212ENST00000474833 RIMBP3BA6NNM3 1639 aa28.41■■■□□ 2.14
PCCB-212ENST00000474833 RIMBP3Q9UFD9 1639 aa28.41■■■□□ 2.14
PCCB-212ENST00000474833 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
PCCB-212ENST00000474833 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
PCCB-212ENST00000474833 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
PCCB-212ENST00000474833 ARHGEF11O15085 1522 aa28.27■■■□□ 2.12
PCCB-212ENST00000474833 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
PCCB-212ENST00000474833 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
PCCB-212ENST00000474833 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
PCCB-212ENST00000474833 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
PCCB-212ENST00000474833 TARBP1Q13395 1621 aaKnown RBP28.03■■■□□ 2.08
PCCB-212ENST00000474833 CHD1O14646 1710 aa28.03■■■□□ 2.08
PCCB-212ENST00000474833 ABCC8Q09428 1581 aa28.02■■■□□ 2.08
PCCB-212ENST00000474833 ARAP1Q96P48 1450 aa27.98■■■□□ 2.07
PCCB-212ENST00000474833 AQRO60306 1485 aaKnown RBP eCLIP27.96■■■□□ 2.072e-6■■■■□ 23.9
PCCB-212ENST00000474833 CYB5RLQ6IPT4 315 aa27.95■■■□□ 2.06
PCCB-212ENST00000474833 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.05
PCCB-212ENST00000474833 RAD54L2Q9Y4B4 1467 aa27.77■■■□□ 2.04
PCCB-212ENST00000474833 CLASP1Q7Z460 1538 aa27.74■■■□□ 2.03
PCCB-212ENST00000474833 TRHP20396 242 aaPredicted RBP27.73■■■□□ 2.03
PCCB-212ENST00000474833 FBLN2P98095 1184 aa27.73■■■□□ 2.03
PCCB-212ENST00000474833 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
PCCB-212ENST00000474833 SNAPC4Q5SXM2 1469 aa27.69■■■□□ 2.02
PCCB-212ENST00000474833 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
PCCB-212ENST00000474833 SOGA1O94964 1423 aa27.67■■■□□ 2.02
PCCB-212ENST00000474833 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
PCCB-212ENST00000474833 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
PCCB-212ENST00000474833 SYNJ1O43426 1573 aa27.58■■■□□ 2.01
PCCB-212ENST00000474833 CUX1P39880 1505 aa27.57■■■□□ 2
PCCB-212ENST00000474833 GRIN2BQ13224 1484 aa27.51■■■□□ 2
PCCB-212ENST00000474833 SYNJ2O15056 1496 aa27.51■■□□□ 1.99
PCCB-212ENST00000474833 CHMP7Q8WUX9 453 aaPredicted RBP27.47■■□□□ 1.99
PCCB-212ENST00000474833 PBRM1Q86U86 1689 aa27.42■■□□□ 1.98
PCCB-212ENST00000474833 GAPVD1Q14C86 1478 aa27.39■■□□□ 1.98
PCCB-212ENST00000474833 ABCA5Q8WWZ7 1642 aa27.35■■□□□ 1.97
PCCB-212ENST00000474833 ABCA10Q8WWZ4 1543 aa27.29■■□□□ 1.96
PCCB-212ENST00000474833 ERCC6L2Q5T890 1561 aa27.28■■□□□ 1.96
PCCB-212ENST00000474833 AEBP2Q6ZN18 517 aaPredicted RBP27.23■■□□□ 1.95
PCCB-212ENST00000474833 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
PCCB-212ENST00000474833 ADAMTS12P58397 1594 aa27.17■■□□□ 1.94
PCCB-212ENST00000474833 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
PCCB-212ENST00000474833 NUP160Q12769 1436 aa27.16■■□□□ 1.94
PCCB-212ENST00000474833 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
PCCB-212ENST00000474833 WRNQ14191 1432 aaPredicted RBP eCLIP27.02■■□□□ 1.92
PCCB-212ENST00000474833 KIF13AQ9H1H9 1805 aa27■■□□□ 1.91
PCCB-212ENST00000474833 BIVM-ERCC5R4GMW8 1640 aa26.99■■□□□ 1.91
PCCB-212ENST00000474833 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
PCCB-212ENST00000474833 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
PCCB-212ENST00000474833 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
PCCB-212ENST00000474833 PRG4Q92954 1404 aaPredicted RBP26.85■■□□□ 1.89
PCCB-212ENST00000474833 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
PCCB-212ENST00000474833 ABCC10Q5T3U5 1492 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms