RNA–Protein interactions for RNA: ENST00000597446.1

LSR-206, Transcript of lipolysis stimulated lipoprotein receptor, humanhuman

TSL 3

Gene LSR, Length 478 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSR-206ENST00000597446 NISCHQ9Y2I1 1504 aa39.85■■■■□ 3.97
LSR-206ENST00000597446 CCDC180Q9P1Z9 1646 aa35.62■■■■□ 3.29
LSR-206ENST00000597446 ABCC9O60706 1549 aa35.16■■■■□ 3.22
LSR-206ENST00000597446 RB1CC1Q8TDY2 1594 aa33.66■■■□□ 2.98
LSR-206ENST00000597446 NACADO15069 1562 aa33.53■■■□□ 2.96
LSR-206ENST00000597446 DCAF8L2P0C7V8 631 aa33.31■■■□□ 2.92
LSR-206ENST00000597446 MYO15BQ96JP2 1530 aa33.22■■■□□ 2.91
LSR-206ENST00000597446 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
LSR-206ENST00000597446 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
LSR-206ENST00000597446 DCAF1Q9Y4B6 1507 aa32.95■■■□□ 2.87
LSR-206ENST00000597446 PABPN1Q86U42 306 aaKnown RBP eCLIP32.75■■■□□ 2.83
LSR-206ENST00000597446 BICRAQ9NZM4 1560 aa32.73■■■□□ 2.83
LSR-206ENST00000597446 DNAJC5BQ9UF47 199 aa32.63■■■□□ 2.81
LSR-206ENST00000597446 SCRIBQ14160 1630 aa32.45■■■□□ 2.79
LSR-206ENST00000597446 SHROOM4Q9ULL8 1493 aa32.27■■■□□ 2.76
LSR-206ENST00000597446 EIF4G1Q04637 1599 aaKnown RBP31.85■■■□□ 2.69
LSR-206ENST00000597446 CC2D2AQ9P2K1 1620 aa31.82■■■□□ 2.69
LSR-206ENST00000597446 CECR2Q9BXF3 1484 aa31.62■■■□□ 2.65
LSR-206ENST00000597446 SMARCA4P51532 1647 aa31.02■■■□□ 2.56
LSR-206ENST00000597446 NCAPD3P42695 1498 aa30.94■■■□□ 2.54
LSR-206ENST00000597446 ATAD2BQ9ULI0 1458 aa30.91■■■□□ 2.54
LSR-206ENST00000597446 BAZ1AQ9NRL2 1556 aaPredicted RBP30.89■■■□□ 2.54
LSR-206ENST00000597446 SMARCA2P51531 1590 aa30.84■■■□□ 2.53
LSR-206ENST00000597446 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
LSR-206ENST00000597446 PEG3Q9GZU2 1588 aa30.73■■■□□ 2.51
LSR-206ENST00000597446 MROH2BQ7Z745 1585 aa30.71■■■□□ 2.51
LSR-206ENST00000597446 BAZ1BQ9UIG0 1483 aaKnown RBP30.61■■■□□ 2.49
LSR-206ENST00000597446 WIZO95785 1651 aa30.39■■■□□ 2.46
LSR-206ENST00000597446 NESP48681 1621 aa30.35■■■□□ 2.45
LSR-206ENST00000597446 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
LSR-206ENST00000597446 RSF1Q96T23 1441 aaPredicted RBP30.21■■■□□ 2.43
LSR-206ENST00000597446 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.42
LSR-206ENST00000597446 CUX2O14529 1486 aa30.13■■■□□ 2.41
LSR-206ENST00000597446 KIF21AQ7Z4S6 1674 aa30.02■■■□□ 2.4
LSR-206ENST00000597446 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.39
LSR-206ENST00000597446 THOC2Q8NI27 1593 aaKnown RBP30■■■□□ 2.39
LSR-206ENST00000597446 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
LSR-206ENST00000597446 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
LSR-206ENST00000597446 CFTRP13569 1480 aa29.77■■■□□ 2.36
LSR-206ENST00000597446 MRC2Q9UBG0 1479 aa29.7■■■□□ 2.35
LSR-206ENST00000597446 FANCD2Q9BXW9 1451 aa29.67■■■□□ 2.34
LSR-206ENST00000597446 CEP164Q9UPV0 1460 aa29.66■■■□□ 2.34
LSR-206ENST00000597446 WDR62O43379 1518 aa29.66■■■□□ 2.34
LSR-206ENST00000597446 CCDC88BA6NC98 1476 aa29.65■■■□□ 2.34
LSR-206ENST00000597446 DNAJC5Q9H3Z4 198 aa29.62■■■□□ 2.33
LSR-206ENST00000597446 PRDM2Q13029 1718 aa29.6■■■□□ 2.33
LSR-206ENST00000597446 URB2Q14146 1524 aaKnown RBP29.43■■■□□ 2.3
LSR-206ENST00000597446 TOPBP1Q92547 1522 aa29.18■■■□□ 2.26
LSR-206ENST00000597446 DNMBPQ6XZF7 1577 aa29.11■■■□□ 2.25
LSR-206ENST00000597446 ABCC8Q09428 1581 aa29.1■■■□□ 2.25
LSR-206ENST00000597446 SUPT5HO00267 1087 aaKnown RBP29.08■■■□□ 2.25
LSR-206ENST00000597446 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
LSR-206ENST00000597446 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
LSR-206ENST00000597446 TARBP1Q13395 1621 aaKnown RBP28.93■■■□□ 2.22
LSR-206ENST00000597446 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
LSR-206ENST00000597446 EIF4G3O43432 1585 aaKnown RBP28.88■■■□□ 2.21
LSR-206ENST00000597446 CUX1P39880 1505 aa28.84■■■□□ 2.21
LSR-206ENST00000597446 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
LSR-206ENST00000597446 RAD54L2Q9Y4B4 1467 aa28.78■■■□□ 2.2
LSR-206ENST00000597446 OSCARQ8IYS5 282 aa28.76■■■□□ 2.19
LSR-206ENST00000597446 AQRO60306 1485 aaKnown RBP eCLIP28.75■■■□□ 2.196e-6■■■■□ 25.1
LSR-206ENST00000597446 SOGA1O94964 1423 aa28.73■■■□□ 2.19
LSR-206ENST00000597446 WDR97A6NE52 1622 aa28.64■■■□□ 2.18
LSR-206ENST00000597446 TDRD9Q8NDG6 1382 aaKnown RBP28.62■■■□□ 2.17
LSR-206ENST00000597446 CHD1O14646 1710 aa28.62■■■□□ 2.17
LSR-206ENST00000597446 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
LSR-206ENST00000597446 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
LSR-206ENST00000597446 SNAPC4Q5SXM2 1469 aa28.48■■■□□ 2.15
LSR-206ENST00000597446 SYNJ1O43426 1573 aa28.48■■■□□ 2.15
LSR-206ENST00000597446 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
LSR-206ENST00000597446 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
LSR-206ENST00000597446 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
LSR-206ENST00000597446 PBRM1Q86U86 1689 aa28.45■■■□□ 2.15
LSR-206ENST00000597446 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
LSR-206ENST00000597446 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
LSR-206ENST00000597446 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
LSR-206ENST00000597446 TRIM41Q8WV44 630 aa28.45■■■□□ 2.14
LSR-206ENST00000597446 ABCA5Q8WWZ7 1642 aa28.44■■■□□ 2.14
LSR-206ENST00000597446 MAGI1Q96QZ7 1491 aaPredicted RBP28.42■■■□□ 2.14
LSR-206ENST00000597446 GAPVD1Q14C86 1478 aa28.41■■■□□ 2.14
LSR-206ENST00000597446 FBLN2P98095 1184 aa28.4■■■□□ 2.14
LSR-206ENST00000597446 ARHGEF11O15085 1522 aa28.38■■■□□ 2.13
LSR-206ENST00000597446 SYNJ2O15056 1496 aa28.32■■■□□ 2.12
LSR-206ENST00000597446 CLASP1Q7Z460 1538 aa28.28■■■□□ 2.12
LSR-206ENST00000597446 CHMP7Q8WUX9 453 aaPredicted RBP28.27■■■□□ 2.12
LSR-206ENST00000597446 ADAMTS12P58397 1594 aa28.18■■■□□ 2.1
LSR-206ENST00000597446 ARAP1Q96P48 1450 aa28.14■■■□□ 2.09
LSR-206ENST00000597446 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
LSR-206ENST00000597446 GRIN2AQ12879 1464 aa28.1■■■□□ 2.09
LSR-206ENST00000597446 CYB5RLQ6IPT4 315 aa28.06■■■□□ 2.08
LSR-206ENST00000597446 FHAD1B1AJZ9 1412 aa28.06■■■□□ 2.08
LSR-206ENST00000597446 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
LSR-206ENST00000597446 NUP160Q12769 1436 aa28.01■■■□□ 2.07
LSR-206ENST00000597446 SHROOM2Q13796 1616 aa27.89■■■□□ 2.05
LSR-206ENST00000597446 ERCC6L2Q5T890 1561 aa27.87■■■□□ 2.05
LSR-206ENST00000597446 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
LSR-206ENST00000597446 IGF1RP08069 1367 aa27.84■■■□□ 2.05
LSR-206ENST00000597446 CUL7Q14999 1698 aa27.81■■■□□ 2.04
LSR-206ENST00000597446 RUSC2Q8N2Y8 1516 aa27.78■■■□□ 2.04
LSR-206ENST00000597446 JPH4Q96JJ6 628 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms