RNA–Protein interactions for RNA: ENST00000357503.2

TOR4A-201, Transcript of torsin family 4 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TOR4A, Length 4,148 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOR4A-201ENST00000357503 NISCHQ9Y2I1 1504 aa29.63■■■□□ 2.33
TOR4A-201ENST00000357503 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
TOR4A-201ENST00000357503 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
TOR4A-201ENST00000357503 SUPT5HO00267 1087 aaKnown RBP27.77■■■□□ 2.04
TOR4A-201ENST00000357503 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
TOR4A-201ENST00000357503 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.78
TOR4A-201ENST00000357503 ABCC9O60706 1549 aa25.63■■□□□ 1.69
TOR4A-201ENST00000357503 TTBK1Q5TCY1 1321 aaPredicted RBP25.63■■□□□ 1.69
TOR4A-201ENST00000357503 RANGAP1P46060 587 aaPredicted RBP25.57■■□□□ 1.68
TOR4A-201ENST00000357503 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
TOR4A-201ENST00000357503 PABPN1Q86U42 306 aaKnown RBP eCLIP25.29■■□□□ 1.64
TOR4A-201ENST00000357503 PCGF6Q9BYE7 350 aa25.27■■□□□ 1.64
TOR4A-201ENST00000357503 APLP2Q06481 763 aa25.25■■□□□ 1.63
TOR4A-201ENST00000357503 UBTFP17480 764 aaKnown RBP25.1■■□□□ 1.61
TOR4A-201ENST00000357503 CCDC180Q9P1Z9 1646 aa25.06■■□□□ 1.6
TOR4A-201ENST00000357503 PPARGC1BQ86YN6 1023 aaKnown RBP25.03■■□□□ 1.6
TOR4A-201ENST00000357503 ATP1B4Q9UN42 357 aaPredicted RBP25■■□□□ 1.59
TOR4A-201ENST00000357503 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
TOR4A-201ENST00000357503 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
TOR4A-201ENST00000357503 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
TOR4A-201ENST00000357503 CCER1Q8TC90 406 aaPredicted RBP24.5■■□□□ 1.51
TOR4A-201ENST00000357503 ITGAEP38570 1179 aa24.3■■□□□ 1.48
TOR4A-201ENST00000357503 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
TOR4A-201ENST00000357503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.2■■□□□ 1.46
TOR4A-201ENST00000357503 HNRNPUL2Q1KMD3 747 aaKnown RBP24.2■■□□□ 1.46
TOR4A-201ENST00000357503 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
TOR4A-201ENST00000357503 RB1CC1Q8TDY2 1594 aa24.1■■□□□ 1.45
TOR4A-201ENST00000357503 NACADO15069 1562 aa24.01■■□□□ 1.43
TOR4A-201ENST00000357503 ZEB1P37275 1124 aaPredicted RBP23.94■■□□□ 1.42
TOR4A-201ENST00000357503 FBLN2P98095 1184 aa23.86■■□□□ 1.41
TOR4A-201ENST00000357503 MYT1LQ9UL68 1186 aa23.79■■□□□ 1.4
TOR4A-201ENST00000357503 DCAF1Q9Y4B6 1507 aa23.78■■□□□ 1.4
TOR4A-201ENST00000357503 P3H3Q8IVL6 736 aa23.78■■□□□ 1.4
TOR4A-201ENST00000357503 CSRNP3Q8WYN3 585 aa23.74■■□□□ 1.39
TOR4A-201ENST00000357503 HRCP23327 699 aa23.73■■□□□ 1.39
TOR4A-201ENST00000357503 ARID3CA6NKF2 412 aa23.7■■□□□ 1.38
TOR4A-201ENST00000357503 YTHDC1Q96MU7 727 aaKnown RBP23.69■■□□□ 1.38
TOR4A-201ENST00000357503 FAM50AQ14320 339 aaKnown RBP23.64■■□□□ 1.37
TOR4A-201ENST00000357503 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.37
TOR4A-201ENST00000357503 CNGB1Q14028 1251 aaPredicted RBP23.53■■□□□ 1.36
TOR4A-201ENST00000357503 POLR3GLQ9BT43 218 aa23.5■■□□□ 1.35
TOR4A-201ENST00000357503 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
TOR4A-201ENST00000357503 MYO15BQ96JP2 1530 aa23.41■■□□□ 1.34
TOR4A-201ENST00000357503 CENPBP07199 599 aaPredicted RBP23.41■■□□□ 1.34
TOR4A-201ENST00000357503 NEUROD1Q13562 356 aa23.31■■□□□ 1.32
TOR4A-201ENST00000357503 TRIM52Q96A61 297 aa23.31■■□□□ 1.32
TOR4A-201ENST00000357503 PELP1Q8IZL8 1130 aaKnown RBP23.27■■□□□ 1.31
TOR4A-201ENST00000357503 ZNF777Q9ULD5 760 aaPredicted RBP23.15■■□□□ 1.3
TOR4A-201ENST00000357503 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
TOR4A-201ENST00000357503 ZNF326Q5BKZ1 582 aaKnown RBP23.08■■□□□ 1.28
TOR4A-201ENST00000357503 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
TOR4A-201ENST00000357503 DIEXFQ68CQ4 756 aaKnown RBP23.02■■□□□ 1.28
TOR4A-201ENST00000357503 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
TOR4A-201ENST00000357503 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
TOR4A-201ENST00000357503 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
TOR4A-201ENST00000357503 SLC4A1APQ9BWU0 796 aaKnown RBP22.93■■□□□ 1.26
TOR4A-201ENST00000357503 NEFLP07196 543 aa22.91■■□□□ 1.26
TOR4A-201ENST00000357503 CHIC2Q9UKJ5 165 aa22.89■■□□□ 1.25
TOR4A-201ENST00000357503 CDK11AQ9UQ88 783 aaPredicted RBP22.84■■□□□ 1.25
TOR4A-201ENST00000357503 CLIP1P30622 1438 aa22.83■■□□□ 1.25
TOR4A-201ENST00000357503 SOGA1O94964 1423 aa22.76■■□□□ 1.23
TOR4A-201ENST00000357503 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
TOR4A-201ENST00000357503 CEP162Q5TB80 1403 aa22.72■■□□□ 1.23
TOR4A-201ENST00000357503 WIZO95785 1651 aa22.69■■□□□ 1.22
TOR4A-201ENST00000357503 MTUS2Q5JR59 1369 aa22.66■■□□□ 1.22
TOR4A-201ENST00000357503 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
TOR4A-201ENST00000357503 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
TOR4A-201ENST00000357503 KIF27Q86VH2 1401 aa22.64■■□□□ 1.22
TOR4A-201ENST00000357503 ZNF316A6NFI3 1004 aaPredicted RBP22.64■■□□□ 1.21
TOR4A-201ENST00000357503 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
TOR4A-201ENST00000357503 SMARCA2P51531 1590 aa22.63■■□□□ 1.21
TOR4A-201ENST00000357503 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
TOR4A-201ENST00000357503 NPM1P06748 294 aaKnown RBP eCLIP22.61■■□□□ 1.21
TOR4A-201ENST00000357503 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
TOR4A-201ENST00000357503 PLPPR3Q6T4P5 718 aa22.6■■□□□ 1.21
TOR4A-201ENST00000357503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.6■■□□□ 1.21
TOR4A-201ENST00000357503 EEA1Q15075 1411 aa22.56■■□□□ 1.2
TOR4A-201ENST00000357503 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
TOR4A-201ENST00000357503 RRP7BPQ9NSQ0 103 aa22.56■■□□□ 1.2
TOR4A-201ENST00000357503 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
TOR4A-201ENST00000357503 CUX2O14529 1486 aa22.52■■□□□ 1.2
TOR4A-201ENST00000357503 CHGAP10645 457 aaKnown RBP22.52■■□□□ 1.2
TOR4A-201ENST00000357503 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
TOR4A-201ENST00000357503 HIRIP3Q9BW71 556 aaPredicted RBP22.51■■□□□ 1.19
TOR4A-201ENST00000357503 TNIKQ9UKE5 1360 aa22.5■■□□□ 1.19
TOR4A-201ENST00000357503 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
TOR4A-201ENST00000357503 BCANQ96GW7 911 aa22.47■■□□□ 1.19
TOR4A-201ENST00000357503 TSPY4P0CV99 314 aa22.46■■□□□ 1.19
TOR4A-201ENST00000357503 TSPY10P0CW01 314 aa22.46■■□□□ 1.19
TOR4A-201ENST00000357503 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
TOR4A-201ENST00000357503 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
TOR4A-201ENST00000357503 ANP32CO43423 234 aa22.45■■□□□ 1.18
TOR4A-201ENST00000357503 ERICH6Q7L0X2 663 aa22.45■■□□□ 1.18
TOR4A-201ENST00000357503 CARMIL1Q5VZK9 1371 aa22.45■■□□□ 1.18
TOR4A-201ENST00000357503 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
TOR4A-201ENST00000357503 TONSLQ96HA7 1378 aa22.42■■□□□ 1.18
TOR4A-201ENST00000357503 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
TOR4A-201ENST00000357503 PLEKHD1A6NEE1 506 aa22.41■■□□□ 1.18
TOR4A-201ENST00000357503 DDX10Q13206 875 aaKnown RBP22.39■■□□□ 1.17
TOR4A-201ENST00000357503 KDM2AQ9Y2K7 1162 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms