RNA–Protein interactions for RNA: ENST00000432309.5

MDH1-205, Transcript of malate dehydrogenase 1, humanhuman

TSL 5

Gene MDH1, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-205ENST00000432309 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
MDH1-205ENST00000432309 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
MDH1-205ENST00000432309 ABCC9O60706 1549 aa20.87■□□□□ 0.93
MDH1-205ENST00000432309 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
MDH1-205ENST00000432309 NACADO15069 1562 aa19.72■□□□□ 0.75
MDH1-205ENST00000432309 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
MDH1-205ENST00000432309 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
MDH1-205ENST00000432309 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
MDH1-205ENST00000432309 DCAF8L2P0C7V8 631 aa19.42■□□□□ 0.7
MDH1-205ENST00000432309 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.69
MDH1-205ENST00000432309 BICRAQ9NZM4 1560 aa19.35■□□□□ 0.69
MDH1-205ENST00000432309 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
MDH1-205ENST00000432309 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
MDH1-205ENST00000432309 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
MDH1-205ENST00000432309 SCRIBQ14160 1630 aa19.02■□□□□ 0.64
MDH1-205ENST00000432309 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.62
MDH1-205ENST00000432309 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
MDH1-205ENST00000432309 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
MDH1-205ENST00000432309 NCAPD3P42695 1498 aa18.18■□□□□ 0.5
MDH1-205ENST00000432309 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
MDH1-205ENST00000432309 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
MDH1-205ENST00000432309 HMGXB3Q12766 1538 aa18.1■□□□□ 0.49
MDH1-205ENST00000432309 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
MDH1-205ENST00000432309 CUX2O14529 1486 aa18.02■□□□□ 0.48
MDH1-205ENST00000432309 BAZ1AQ9NRL2 1556 aaPredicted RBP18.02■□□□□ 0.48
MDH1-205ENST00000432309 ERCC6Q03468 1493 aa18■□□□□ 0.47
MDH1-205ENST00000432309 PEG3Q9GZU2 1588 aa17.99■□□□□ 0.47
MDH1-205ENST00000432309 DNAJC5Q9H3Z4 198 aa17.98■□□□□ 0.47
MDH1-205ENST00000432309 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
MDH1-205ENST00000432309 NESP48681 1621 aa17.94■□□□□ 0.46
MDH1-205ENST00000432309 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
MDH1-205ENST00000432309 THOC2Q8NI27 1593 aaKnown RBP17.84■□□□□ 0.45
MDH1-205ENST00000432309 LAMC3Q9Y6N6 1575 aa17.82■□□□□ 0.44
MDH1-205ENST00000432309 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.44
MDH1-205ENST00000432309 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
MDH1-205ENST00000432309 WIZO95785 1651 aa17.7■□□□□ 0.42
MDH1-205ENST00000432309 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.42
MDH1-205ENST00000432309 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
MDH1-205ENST00000432309 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
MDH1-205ENST00000432309 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
MDH1-205ENST00000432309 WDR62O43379 1518 aa17.54■□□□□ 0.4
MDH1-205ENST00000432309 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
MDH1-205ENST00000432309 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
MDH1-205ENST00000432309 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
MDH1-205ENST00000432309 CFTRP13569 1480 aa17.43■□□□□ 0.38
MDH1-205ENST00000432309 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
MDH1-205ENST00000432309 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
MDH1-205ENST00000432309 URB2Q14146 1524 aaKnown RBP17.32■□□□□ 0.36
MDH1-205ENST00000432309 CCDC88BA6NC98 1476 aa17.22■□□□□ 0.35
MDH1-205ENST00000432309 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
MDH1-205ENST00000432309 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
MDH1-205ENST00000432309 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
MDH1-205ENST00000432309 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
MDH1-205ENST00000432309 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
MDH1-205ENST00000432309 DNMBPQ6XZF7 1577 aa17.07■□□□□ 0.32
MDH1-205ENST00000432309 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
MDH1-205ENST00000432309 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
MDH1-205ENST00000432309 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.31
MDH1-205ENST00000432309 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.31
MDH1-205ENST00000432309 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.31
MDH1-205ENST00000432309 TARBP1Q13395 1621 aaKnown RBP17.01■□□□□ 0.31
MDH1-205ENST00000432309 CHD1O14646 1710 aa16.96■□□□□ 0.3
MDH1-205ENST00000432309 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
MDH1-205ENST00000432309 ARHGEF11O15085 1522 aa16.92■□□□□ 0.3
MDH1-205ENST00000432309 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.38e-7■■■□□ 17.1
MDH1-205ENST00000432309 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
MDH1-205ENST00000432309 WDR97A6NE52 1622 aa16.83■□□□□ 0.28
MDH1-205ENST00000432309 FGD5Q6ZNL6 1462 aa16.82■□□□□ 0.28
MDH1-205ENST00000432309 CUX1P39880 1505 aa16.81■□□□□ 0.28
MDH1-205ENST00000432309 SOGA1O94964 1423 aa16.79■□□□□ 0.28
MDH1-205ENST00000432309 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.28
MDH1-205ENST00000432309 ARAP1Q96P48 1450 aa16.77■□□□□ 0.28
MDH1-205ENST00000432309 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.27
MDH1-205ENST00000432309 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
MDH1-205ENST00000432309 PBRM1Q86U86 1689 aa16.72■□□□□ 0.27
MDH1-205ENST00000432309 MAGI1Q96QZ7 1491 aaPredicted RBP16.72■□□□□ 0.27
MDH1-205ENST00000432309 FBLN2P98095 1184 aa16.7■□□□□ 0.26
MDH1-205ENST00000432309 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
MDH1-205ENST00000432309 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
MDH1-205ENST00000432309 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
MDH1-205ENST00000432309 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
MDH1-205ENST00000432309 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
MDH1-205ENST00000432309 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
MDH1-205ENST00000432309 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
MDH1-205ENST00000432309 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
MDH1-205ENST00000432309 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
MDH1-205ENST00000432309 TOP2BQ02880 1626 aa16.55■□□□□ 0.24
MDH1-205ENST00000432309 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
MDH1-205ENST00000432309 ADAMTS12P58397 1594 aa16.54■□□□□ 0.24
MDH1-205ENST00000432309 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
MDH1-205ENST00000432309 TRHP20396 242 aaPredicted RBP16.49■□□□□ 0.23
MDH1-205ENST00000432309 WRNQ14191 1432 aaPredicted RBP eCLIP16.49■□□□□ 0.23
MDH1-205ENST00000432309 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
MDH1-205ENST00000432309 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
MDH1-205ENST00000432309 NUP160Q12769 1436 aa16.45■□□□□ 0.22
MDH1-205ENST00000432309 SHROOM2Q13796 1616 aa16.44■□□□□ 0.22
MDH1-205ENST00000432309 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
MDH1-205ENST00000432309 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
MDH1-205ENST00000432309 RUSC2Q8N2Y8 1516 aa16.32■□□□□ 0.2
MDH1-205ENST00000432309 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms