Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.9■□□□□ 0.32e-7■■■□□ 17.2
SF3B1O75533 ORC6-203ENST00000563599 681 ntTSL 516.64■□□□□ 0.252e-7■■■□□ 17.2
SF3B1O75533 MRPL20-204ENST00000487659 1693 ntTSL 216.44■□□□□ 0.221e-6■■■□□ 17.2
SF3B1O75533 PCM1-218ENST00000523055 1426 ntTSL 1 (best)16.43■□□□□ 0.221e-6■■■□□ 17.2
SF3B1O75533 AC006511.5-201ENST00000639368 1209 ntTSL 516.13■□□□□ 0.177e-6■■■□□ 17.2
SF3B1O75533 PCM1-204ENST00000517730 2536 ntTSL 1 (best)15.79■□□□□ 0.121e-6■■■□□ 17.2
SF3B1O75533 ALDOC-209ENST00000584086 686 ntTSL 315.75■□□□□ 0.117e-6■■■□□ 17.2
SF3B1O75533 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.081e-6■■■□□ 17.2
SF3B1O75533 ALDOC-205ENST00000460201 922 ntTSL 215.33■□□□□ 0.047e-6■■■□□ 17.2
SF3B1O75533 DBF4-203ENST00000430279 1274 ntTSL 215.03■□□□□ -01e-6■■■□□ 17.2
SF3B1O75533 ALDOC-208ENST00000582381 571 ntTSL 214.4□□□□□ -0.17e-6■■■□□ 17.2
SF3B1O75533 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.26□□□□□ -0.137e-6■■■□□ 17.2
SF3B1O75533 SYMPK-218ENST00000602061 503 ntTSL 414.12□□□□□ -0.151e-6■■■□□ 17.2
SF3B1O75533 COL18A1-206ENST00000459895 588 ntTSL 313.9□□□□□ -0.181e-6■■■□□ 17.2
SF3B1O75533 DBF4-204ENST00000431138 2342 ntTSL 1 (best)13.72□□□□□ -0.211e-6■■■□□ 17.2
SF3B1O75533 ALDOC-207ENST00000581807 580 ntTSL 313.34□□□□□ -0.277e-6■■■□□ 17.2
SF3B1O75533 KEL-204ENST00000467543 786 ntTSL 413.19□□□□□ -0.37e-6■■■□□ 17.2
SF3B1O75533 KEL-202ENST00000460479 556 ntTSL 412.79□□□□□ -0.367e-6■■■□□ 17.2
SF3B1O75533 SRRT-211ENST00000478693 655 ntTSL 212.34□□□□□ -0.432e-7■■■□□ 17.2
SF3B1O75533 MRPL20-205ENST00000492508 588 ntTSL 211.84□□□□□ -0.511e-6■■■□□ 17.2
SF3B1O75533 HDLBP-242ENST00000488013 651 ntTSL 211.83□□□□□ -0.522e-7■■■□□ 17.2
SF3B1O75533 ALDOC-206ENST00000578590 839 ntTSL 411.77□□□□□ -0.537e-6■■■□□ 17.2
SF3B1O75533 NECAP1-223ENST00000640091 2115 ntTSL 211□□□□□ -0.657e-6■■■□□ 17.2
SF3B1O75533 ALDOC-204ENST00000435638 579 ntTSL 310.87□□□□□ -0.677e-6■■■□□ 17.2
SF3B1O75533 NECAP1-216ENST00000639167 2197 ntTSL 5 BASIC10.86□□□□□ -0.677e-6■■■□□ 17.2
SF3B1O75533 SRRT-208ENST00000469602 376 ntTSL 210.61□□□□□ -0.712e-7■■■□□ 17.2
SF3B1O75533 CNOT2-229ENST00000551179 355 ntTSL 210.61□□□□□ -0.711e-6■■■□□ 17.2
SF3B1O75533 NECAP1-219ENST00000639811 2175 ntTSL 5 BASIC10.14□□□□□ -0.797e-6■■■□□ 17.2
SF3B1O75533 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.847e-6■■■□□ 17.2
SF3B1O75533 NECAP1-215ENST00000639071 2578 ntTSL 59.64□□□□□ -0.877e-6■■■□□ 17.2
SF3B1O75533 RPS24-211ENST00000480662 711 ntTSL 29.6□□□□□ -0.871e-6■■■□□ 17.2
SF3B1O75533 NECAP1-225ENST00000640209 2473 ntTSL 59.59□□□□□ -0.877e-6■■■□□ 17.2
SF3B1O75533 PHF19-210ENST00000467266 566 ntTSL 49.37□□□□□ -0.911e-6■■■□□ 17.2
SF3B1O75533 NECAP1-217ENST00000639276 2646 ntTSL 59.17□□□□□ -0.947e-6■■■□□ 17.2
SF3B1O75533 NECAP1-207ENST00000544891 4899 ntTSL 59.16□□□□□ -0.947e-6■■■□□ 17.2
SF3B1O75533 BTK-207ENST00000478995 705 ntTSL 39.08□□□□□ -0.967e-6■■■□□ 17.2
SF3B1O75533 NECAP1-218ENST00000639595 2587 ntTSL 58.91□□□□□ -0.987e-6■■■□□ 17.2
SF3B1O75533 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.997e-6■■■□□ 17.2
SF3B1O75533 NECAP1-202ENST00000450991 2446 ntTSL 1 (best)8.63□□□□□ -1.037e-6■■■□□ 17.2
SF3B1O75533 OSBPL9-220ENST00000531061 530 ntTSL 48.4□□□□□ -1.061e-6■■■□□ 17.2
SF3B1O75533 NECAP1-227ENST00000640648 5166 ntTSL 58.39□□□□□ -1.077e-6■■■□□ 17.2
SF3B1O75533 NECAP1-214ENST00000639038 2423 ntTSL 58.25□□□□□ -1.097e-6■■■□□ 17.2
SF3B1O75533 MRPL20-206ENST00000493287 504 ntTSL 28.03□□□□□ -1.121e-6■■■□□ 17.2
SF3B1O75533 OSBPL9-219ENST00000528603 779 ntTSL 47.88□□□□□ -1.151e-6■■■□□ 17.2
SF3B1O75533 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.167e-6■■■□□ 17.2
SF3B1O75533 NECAP1-224ENST00000640099 3313 ntTSL 57.76□□□□□ -1.177e-6■■■□□ 17.2
SF3B1O75533 PPP6R3-210ENST00000526307 4134 ntTSL 27.64□□□□□ -1.193e-8■■■□□ 17.2
SF3B1O75533 NECAP1-203ENST00000537796 3418 ntTSL 57.53□□□□□ -1.27e-6■■■□□ 17.2
SF3B1O75533 OSBPL9-210ENST00000475697 3375 ntTSL 27.42□□□□□ -1.221e-6■■■□□ 17.2
SF3B1O75533 OSBPL9-224ENST00000533825 565 ntTSL 47.27□□□□□ -1.251e-6■■■□□ 17.2
SF3B1O75533 NECAP1-213ENST00000638883 3940 ntTSL 57.24□□□□□ -1.257e-6■■■□□ 17.2
SF3B1O75533 UBXN4-205ENST00000467065 334 ntTSL 57.14□□□□□ -1.272e-7■■■□□ 17.2
SF3B1O75533 PHF19-209ENST00000464712 553 ntTSL 47.1□□□□□ -1.271e-6■■■□□ 17.2
SF3B1O75533 NECAP1-220ENST00000639841 1982 ntTSL 56.96□□□□□ -1.297e-6■■■□□ 17.2
SF3B1O75533 NECAP1-226ENST00000640481 3216 ntTSL 56.96□□□□□ -1.297e-6■■■□□ 17.2
SF3B1O75533 NECAP1-222ENST00000640072 3456 ntTSL 56□□□□□ -1.457e-6■■■□□ 17.2
SF3B1O75533 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.69□□□□□ -1.57e-6■■■□□ 17.2
SF3B1O75533 OSBPL9-221ENST00000531819 4520 ntTSL 25.19□□□□□ -1.581e-6■■■□□ 17.2
SF3B1O75533 EIF4G2-215ENST00000530564 849 ntTSL 25.13□□□□□ -1.593e-8■■■□□ 17.2
SF3B1O75533 SEC63-209ENST00000484803 724 ntTSL 25.06□□□□□ -1.61e-6■■■□□ 17.2
SF3B1O75533 ZFC3H1-205ENST00000547398 470 ntTSL 24.77□□□□□ -1.657e-6■■■□□ 17.2
SF3B1O75533 ZFC3H1-209ENST00000550963 845 ntTSL 54.72□□□□□ -1.657e-6■■■□□ 17.2
SF3B1O75533 ZNF207-209ENST00000579416 396 ntTSL 24.65□□□□□ -1.677e-6■■■□□ 17.2
SF3B1O75533 SEC63-202ENST00000429168 647 ntTSL 54.36□□□□□ -1.711e-6■■■□□ 17.2
SF3B1O75533 DBF4-207ENST00000498144 576 ntTSL 23.42□□□□□ -1.861e-6■■■□□ 17.2
SF3B1O75533 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.45■□□□□ 0.385e-8■■■□□ 17.2
SF3B1O75533 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.235e-8■■■□□ 17.2
SF3B1O75533 AC124068.2-201ENST00000569473 1109 ntBASIC15.54■□□□□ 0.081e-14■■■□□ 17.2
SF3B1O75533 MAGEC2-201ENST00000247452 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.485e-8■■■□□ 17.2
SF3B1O75533 TRIM27-205ENST00000481474 7006 ntTSL 1 (best)11.68□□□□□ -0.545e-8■■■□□ 17.2
SF3B1O75533 EEF2-207ENST00000600794 352 ntTSL 310.15□□□□□ -0.785e-8■■■□□ 17.2
SF3B1O75533 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.735e-6■■■□□ 17.1
SF3B1O75533 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.365e-6■■■□□ 17.1
SF3B1O75533 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.055e-6■■■□□ 17.1
SF3B1O75533 SSBP1-206ENST00000467681 630 ntTSL 214.75□□□□□ -0.055e-6■■■□□ 17.1
SF3B1O75533 SSBP1-210ENST00000481508 989 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.575e-6■■■□□ 17.1
SF3B1O75533 SSBP1-212ENST00000489378 1434 ntTSL 210.25□□□□□ -0.775e-6■■■□□ 17.1
SF3B1O75533 SSBP1-208ENST00000469123 662 ntTSL 59.31□□□□□ -0.925e-6■■■□□ 17.1
SF3B1O75533 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.295e-6■■■□□ 17.1
SF3B1O75533 SSBP1-204ENST00000465167 517 ntTSL 56.37□□□□□ -1.395e-6■■■□□ 17.1
SF3B1O75533 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.645e-6■■■□□ 17.1
SF3B1O75533 BRD2-218ENST00000606059 565 ntTSL 211.78□□□□□ -0.524e-13■■■□□ 17.1
SF3B1O75533 BRD2-208ENST00000464592 1590 ntTSL 511.67□□□□□ -0.544e-13■■■□□ 17.1
SF3B1O75533 BRD2-210ENST00000481259 667 ntTSL 35.49□□□□□ -1.534e-13■■■□□ 17.1
SF3B1O75533 RBM39-224ENST00000463098 869 ntTSL 215.87■□□□□ 0.131e-6■■■□□ 17.1
SF3B1O75533 RBM39-222ENST00000461849 861 ntTSL 215.14■□□□□ 0.011e-6■■■□□ 17.1
SF3B1O75533 MYL6-204ENST00000546630 544 ntTSL 1 (best)15.94■□□□□ 0.143e-7■■■□□ 17.1
SF3B1O75533 MYL6B-203ENST00000548571 223 ntTSL 49.61□□□□□ -0.873e-7■■■□□ 17.1
SF3B1O75533 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.072e-6■■■□□ 17.1
SF3B1O75533 BRD2-213ENST00000495733 3404 ntTSL 215.26■□□□□ 0.032e-6■■■□□ 17.1
SF3B1O75533 BRD2-212ENST00000482914 4834 ntTSL 1 (best)13.9□□□□□ -0.182e-6■■■□□ 17.1
SF3B1O75533 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)13.82□□□□□ -0.22e-6■■■□□ 17.1
SF3B1O75533 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.812e-6■■■□□ 17.1
SF3B1O75533 CIZ1-215ENST00000475471 836 ntTSL 214.6□□□□□ -0.072e-6■■■□□ 17
SF3B1O75533 CIZ1-216ENST00000476239 853 ntTSL 59.85□□□□□ -0.832e-6■■■□□ 17
SF3B1O75533 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.45■■□□□ 1.022e-6■■■□□ 17
SF3B1O75533 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.522e-6■■■□□ 17
SF3B1O75533 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.212e-6■■■□□ 17
SF3B1O75533 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.58■□□□□ 0.082e-6■■■□□ 17
SF3B1O75533 ZNF131-218ENST00000511736 956 ntTSL 1 (best)15.2■□□□□ 0.022e-6■■■□□ 17
Retrieved 100 of 46,956 protein–RNA pairs in 4247.1 ms