RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 NISCHQ9Y2I1 1504 aa20.61■□□□□ 0.89
SSBP1-208ENST00000469123 CCDC180Q9P1Z9 1646 aa18.37■□□□□ 0.53
SSBP1-208ENST00000469123 ABCC9O60706 1549 aa17.73■□□□□ 0.43
SSBP1-208ENST00000469123 NACADO15069 1562 aa17.24■□□□□ 0.35
SSBP1-208ENST00000469123 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
SSBP1-208ENST00000469123 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.35
SSBP1-208ENST00000469123 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
SSBP1-208ENST00000469123 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
SSBP1-208ENST00000469123 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
SSBP1-208ENST00000469123 UNC13AQ9UPW8 1703 aa16.76■□□□□ 0.27
SSBP1-208ENST00000469123 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
SSBP1-208ENST00000469123 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
SSBP1-208ENST00000469123 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
SSBP1-208ENST00000469123 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
SSBP1-208ENST00000469123 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
SSBP1-208ENST00000469123 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
SSBP1-208ENST00000469123 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
SSBP1-208ENST00000469123 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
SSBP1-208ENST00000469123 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
SSBP1-208ENST00000469123 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
SSBP1-208ENST00000469123 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
SSBP1-208ENST00000469123 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
SSBP1-208ENST00000469123 PEG3Q9GZU2 1588 aa15.87■□□□□ 0.13
SSBP1-208ENST00000469123 ATAD2BQ9ULI0 1458 aa15.86■□□□□ 0.13
SSBP1-208ENST00000469123 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
SSBP1-208ENST00000469123 MROH2BQ7Z745 1585 aa15.83■□□□□ 0.12
SSBP1-208ENST00000469123 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
SSBP1-208ENST00000469123 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
SSBP1-208ENST00000469123 WIZO95785 1651 aa15.66■□□□□ 0.1
SSBP1-208ENST00000469123 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.08
SSBP1-208ENST00000469123 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.07
SSBP1-208ENST00000469123 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
SSBP1-208ENST00000469123 PDS5BQ9NTI5 1447 aa15.36■□□□□ 0.05
SSBP1-208ENST00000469123 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
SSBP1-208ENST00000469123 NESP48681 1621 aa15.35■□□□□ 0.05
SSBP1-208ENST00000469123 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.05
SSBP1-208ENST00000469123 CFTRP13569 1480 aa15.33■□□□□ 0.05
SSBP1-208ENST00000469123 SUPT5HO00267 1087 aaKnown RBP15.29■□□□□ 0.04
SSBP1-208ENST00000469123 PRDM2Q13029 1718 aa15.28■□□□□ 0.04
SSBP1-208ENST00000469123 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
SSBP1-208ENST00000469123 CUX2O14529 1486 aa15.22■□□□□ 0.03
SSBP1-208ENST00000469123 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
SSBP1-208ENST00000469123 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
SSBP1-208ENST00000469123 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
SSBP1-208ENST00000469123 MRC2Q9UBG0 1479 aa15.16■□□□□ 0.02
SSBP1-208ENST00000469123 WDR62O43379 1518 aa15.12■□□□□ 0.01
SSBP1-208ENST00000469123 ABCC8Q09428 1581 aa15.07■□□□□ 0
SSBP1-208ENST00000469123 URB2Q14146 1524 aaKnown RBP15.02□□□□□ -0.01
SSBP1-208ENST00000469123 DNMBPQ6XZF7 1577 aa14.99□□□□□ -0.01
SSBP1-208ENST00000469123 TOPBP1Q92547 1522 aa14.97□□□□□ -0.01
SSBP1-208ENST00000469123 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
SSBP1-208ENST00000469123 CUX1P39880 1505 aa14.86□□□□□ -0.03
SSBP1-208ENST00000469123 POLA1P09884 1462 aaPredicted RBP14.84□□□□□ -0.03
SSBP1-208ENST00000469123 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.031e-7■□□□□ 10.2
SSBP1-208ENST00000469123 WDR97A6NE52 1622 aa14.82□□□□□ -0.04
SSBP1-208ENST00000469123 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
SSBP1-208ENST00000469123 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
SSBP1-208ENST00000469123 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
SSBP1-208ENST00000469123 TARBP1Q13395 1621 aaKnown RBP14.79□□□□□ -0.04
SSBP1-208ENST00000469123 SOGA1O94964 1423 aa14.78□□□□□ -0.04
SSBP1-208ENST00000469123 SYNJ1O43426 1573 aa14.74□□□□□ -0.05
SSBP1-208ENST00000469123 EIF4G3O43432 1585 aaKnown RBP14.73□□□□□ -0.05
SSBP1-208ENST00000469123 ABCA10Q8WWZ4 1543 aa14.72□□□□□ -0.05
SSBP1-208ENST00000469123 ZNF608Q9ULD9 1512 aaPredicted RBP14.72□□□□□ -0.05
SSBP1-208ENST00000469123 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
SSBP1-208ENST00000469123 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.064e-9■□□□□ 8.1
SSBP1-208ENST00000469123 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
SSBP1-208ENST00000469123 ABCA5Q8WWZ7 1642 aa14.64□□□□□ -0.07
SSBP1-208ENST00000469123 GRIN2BQ13224 1484 aa14.63□□□□□ -0.07
SSBP1-208ENST00000469123 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
SSBP1-208ENST00000469123 MAGI1Q96QZ7 1491 aaPredicted RBP14.62□□□□□ -0.07
SSBP1-208ENST00000469123 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
SSBP1-208ENST00000469123 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
SSBP1-208ENST00000469123 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
SSBP1-208ENST00000469123 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
SSBP1-208ENST00000469123 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
SSBP1-208ENST00000469123 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
SSBP1-208ENST00000469123 SYNJ2O15056 1496 aa14.54□□□□□ -0.08
SSBP1-208ENST00000469123 CHD1O14646 1710 aa14.52□□□□□ -0.09
SSBP1-208ENST00000469123 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
SSBP1-208ENST00000469123 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
SSBP1-208ENST00000469123 ADAMTS12P58397 1594 aa14.49□□□□□ -0.09
SSBP1-208ENST00000469123 CHMP7Q8WUX9 453 aaPredicted RBP14.49□□□□□ -0.09
SSBP1-208ENST00000469123 CUL7Q14999 1698 aa14.46□□□□□ -0.09
SSBP1-208ENST00000469123 FBLN2P98095 1184 aa14.46□□□□□ -0.09
SSBP1-208ENST00000469123 GRIN2AQ12879 1464 aa14.43□□□□□ -0.1
SSBP1-208ENST00000469123 IGF1RP08069 1367 aa14.42□□□□□ -0.1
SSBP1-208ENST00000469123 EEA1Q15075 1411 aa14.39□□□□□ -0.11
SSBP1-208ENST00000469123 NUP160Q12769 1436 aa14.38□□□□□ -0.11
SSBP1-208ENST00000469123 CLASP1Q7Z460 1538 aa14.37□□□□□ -0.11
SSBP1-208ENST00000469123 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
SSBP1-208ENST00000469123 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
SSBP1-208ENST00000469123 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
SSBP1-208ENST00000469123 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
SSBP1-208ENST00000469123 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
SSBP1-208ENST00000469123 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
SSBP1-208ENST00000469123 RIMBP3CA6NJZ7 1639 aa14.28□□□□□ -0.12
SSBP1-208ENST00000469123 RIMBP3BA6NNM3 1639 aa14.28□□□□□ -0.12
SSBP1-208ENST00000469123 RIMBP3Q9UFD9 1639 aa14.28□□□□□ -0.12
SSBP1-208ENST00000469123 KIAA0586Q9BVV6 1533 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms