RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
NECAP1-220ENST00000639841 AEBP2Q6ZN18 517 aaPredicted RBP19.4■□□□□ 0.7
NECAP1-220ENST00000639841 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
NECAP1-220ENST00000639841 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
NECAP1-220ENST00000639841 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
NECAP1-220ENST00000639841 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
NECAP1-220ENST00000639841 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
NECAP1-220ENST00000639841 PLPPR3Q6T4P5 718 aa16.35■□□□□ 0.21
NECAP1-220ENST00000639841 KCNA4P22459 653 aa16.11■□□□□ 0.17
NECAP1-220ENST00000639841 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
NECAP1-220ENST00000639841 FOXD1Q16676 465 aa15.8■□□□□ 0.12
NECAP1-220ENST00000639841 RTN4Q9NQC3 1192 aaKnown RBP15.73■□□□□ 0.11
NECAP1-220ENST00000639841 NISCHQ9Y2I1 1504 aa15.57■□□□□ 0.08
NECAP1-220ENST00000639841 AMER1Q5JTC6 1135 aaPredicted RBP15.51■□□□□ 0.07
NECAP1-220ENST00000639841 ADRA2BP18089 450 aa15.49■□□□□ 0.07
NECAP1-220ENST00000639841 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
NECAP1-220ENST00000639841 MSH5O43196 834 aa15.38■□□□□ 0.05
NECAP1-220ENST00000639841 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
NECAP1-220ENST00000639841 ZBTB22O15209 634 aa14.94□□□□□ -0.02
NECAP1-220ENST00000639841 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
NECAP1-220ENST00000639841 PPP4R3CPQ6ZMV5 832 aa14.67□□□□□ -0.06
NECAP1-220ENST00000639841 PRKCSHP14314 528 aaPredicted RBP14.61□□□□□ -0.07
NECAP1-220ENST00000639841 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
NECAP1-220ENST00000639841 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
NECAP1-220ENST00000639841 DAXXQ9UER7 740 aaPredicted RBP14.43□□□□□ -0.1
NECAP1-220ENST00000639841 TAOK2Q9UL54 1235 aa14.33□□□□□ -0.12
NECAP1-220ENST00000639841 PLCB2Q00722 1185 aa14.29□□□□□ -0.12
NECAP1-220ENST00000639841 FKBP8Q14318 412 aa14.28□□□□□ -0.12
NECAP1-220ENST00000639841 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
NECAP1-220ENST00000639841 BCANQ96GW7 911 aa14.26□□□□□ -0.13
NECAP1-220ENST00000639841 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
NECAP1-220ENST00000639841 ABCC9O60706 1549 aa14.1□□□□□ -0.15
NECAP1-220ENST00000639841 TIMELESSQ9UNS1 1208 aa14.09□□□□□ -0.15
NECAP1-220ENST00000639841 HAP1P54257 671 aaPredicted RBP14.07□□□□□ -0.16
NECAP1-220ENST00000639841 TPRNQ4KMQ1 711 aa14.07□□□□□ -0.16
NECAP1-220ENST00000639841 ARXQ96QS3 562 aa14.02□□□□□ -0.16
NECAP1-220ENST00000639841 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.18
NECAP1-220ENST00000639841 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
NECAP1-220ENST00000639841 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
NECAP1-220ENST00000639841 VSIG10Q8N0Z9 540 aa13.86□□□□□ -0.19
NECAP1-220ENST00000639841 DNAJC5BQ9UF47 199 aa13.82□□□□□ -0.2
NECAP1-220ENST00000639841 KDM2AQ9Y2K7 1162 aa13.7□□□□□ -0.22
NECAP1-220ENST00000639841 GTF3C3Q9Y5Q9 886 aa13.65□□□□□ -0.22
NECAP1-220ENST00000639841 HOMEZQ8IX15 550 aa13.61□□□□□ -0.23
NECAP1-220ENST00000639841 FBLN2P98095 1184 aa13.57□□□□□ -0.24
NECAP1-220ENST00000639841 RB1CC1Q8TDY2 1594 aa13.57□□□□□ -0.24
NECAP1-220ENST00000639841 ATXN8OSP0DMR3 200 aa13.56□□□□□ -0.24
NECAP1-220ENST00000639841 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
NECAP1-220ENST00000639841 NACADO15069 1562 aa13.45□□□□□ -0.26
NECAP1-220ENST00000639841 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
NECAP1-220ENST00000639841 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
NECAP1-220ENST00000639841 TMEM132AQ24JP5 1023 aa13.38□□□□□ -0.27
NECAP1-220ENST00000639841 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
NECAP1-220ENST00000639841 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
NECAP1-220ENST00000639841 PKD2Q13563 968 aa13.29□□□□□ -0.28
NECAP1-220ENST00000639841 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
NECAP1-220ENST00000639841 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
NECAP1-220ENST00000639841 PAXIP1Q6ZW49 1069 aaPredicted RBP13.24□□□□□ -0.29
NECAP1-220ENST00000639841 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
NECAP1-220ENST00000639841 C14orf37Q86TY3 774 aa13.21□□□□□ -0.29
NECAP1-220ENST00000639841 RANGAP1P46060 587 aaPredicted RBP13.2□□□□□ -0.3
NECAP1-220ENST00000639841 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.2□□□□□ -0.3
NECAP1-220ENST00000639841 POTEHQ6S545 545 aa13.2□□□□□ -0.3
NECAP1-220ENST00000639841 FBXO3Q9UK99 471 aa13.19□□□□□ -0.3
NECAP1-220ENST00000639841 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
NECAP1-220ENST00000639841 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
NECAP1-220ENST00000639841 PODXL2Q9NZ53 605 aa13.18□□□□□ -0.3
NECAP1-220ENST00000639841 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
NECAP1-220ENST00000639841 SHROOM4Q9ULL8 1493 aa13.16□□□□□ -0.3
NECAP1-220ENST00000639841 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.3
NECAP1-220ENST00000639841 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
NECAP1-220ENST00000639841 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-220ENST00000639841 UNC13AQ9UPW8 1703 aa13.12□□□□□ -0.31
NECAP1-220ENST00000639841 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-220ENST00000639841 NBR1Q14596 966 aa13.08□□□□□ -0.32
NECAP1-220ENST00000639841 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
NECAP1-220ENST00000639841 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
NECAP1-220ENST00000639841 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
NECAP1-220ENST00000639841 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
NECAP1-220ENST00000639841 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
NECAP1-220ENST00000639841 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.34
NECAP1-220ENST00000639841 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
NECAP1-220ENST00000639841 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
NECAP1-220ENST00000639841 SUPT5HO00267 1087 aaKnown RBP12.93□□□□□ -0.34
NECAP1-220ENST00000639841 PROM2Q8N271 834 aa12.89□□□□□ -0.35
NECAP1-220ENST00000639841 ZCCHC6Q5VYS8 1495 aaKnown RBP12.88□□□□□ -0.35
NECAP1-220ENST00000639841 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
NECAP1-220ENST00000639841 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
NECAP1-220ENST00000639841 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
NECAP1-220ENST00000639841 CECR2Q9BXF3 1484 aa12.81□□□□□ -0.36
NECAP1-220ENST00000639841 ECM2O94769 699 aaPredicted RBP12.81□□□□□ -0.36
NECAP1-220ENST00000639841 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
NECAP1-220ENST00000639841 TRIM26Q12899 539 aaPredicted RBP12.8□□□□□ -0.36
NECAP1-220ENST00000639841 UBTFP17480 764 aaKnown RBP12.78□□□□□ -0.36
NECAP1-220ENST00000639841 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
NECAP1-220ENST00000639841 RGL2O15211 777 aa12.76□□□□□ -0.37
NECAP1-220ENST00000639841 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
NECAP1-220ENST00000639841 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
NECAP1-220ENST00000639841 HRCP23327 699 aa12.69□□□□□ -0.38
NECAP1-220ENST00000639841 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms