RNA–Protein interactions for RNA: ENST00000495733.5

BRD2-213, Transcript of bromodomain containing 2, humanhuman

TSL 2

Gene BRD2, Length 3,404 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-213ENST00000495733 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
BRD2-213ENST00000495733 SHROOM4Q9ULL8 1493 aa25.11■■□□□ 1.61
BRD2-213ENST00000495733 HRCP23327 699 aa24.98■■□□□ 1.59
BRD2-213ENST00000495733 PPARGC1BQ86YN6 1023 aaKnown RBP24.92■■□□□ 1.58
BRD2-213ENST00000495733 PELP1Q8IZL8 1130 aaKnown RBP24.91■■□□□ 1.58
BRD2-213ENST00000495733 DCAF8L2P0C7V8 631 aa24.79■■□□□ 1.56
BRD2-213ENST00000495733 PCGF6Q9BYE7 350 aa24.68■■□□□ 1.54
BRD2-213ENST00000495733 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
BRD2-213ENST00000495733 SCAF1Q9H7N4 1312 aaKnown RBP24.12■■□□□ 1.45
BRD2-213ENST00000495733 MYT1Q01538 1121 aa24.04■■□□□ 1.44
BRD2-213ENST00000495733 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
BRD2-213ENST00000495733 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
BRD2-213ENST00000495733 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
BRD2-213ENST00000495733 GTF3C3Q9Y5Q9 886 aa23.4■■□□□ 1.34
BRD2-213ENST00000495733 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
BRD2-213ENST00000495733 NEUROD1Q13562 356 aa23.34■■□□□ 1.33
BRD2-213ENST00000495733 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
BRD2-213ENST00000495733 ACIN1Q9UKV3 1341 aaKnown RBP23.3■■□□□ 1.32
BRD2-213ENST00000495733 TRIM26Q12899 539 aaPredicted RBP23.28■■□□□ 1.32
BRD2-213ENST00000495733 ABCC9O60706 1549 aa23.22■■□□□ 1.31
BRD2-213ENST00000495733 ZEB1P37275 1124 aaPredicted RBP23.2■■□□□ 1.3
BRD2-213ENST00000495733 CENPBP07199 599 aaPredicted RBP23.11■■□□□ 1.29
BRD2-213ENST00000495733 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
BRD2-213ENST00000495733 EHMT2Q96KQ7 1210 aa23.04■■□□□ 1.28
BRD2-213ENST00000495733 YTHDC1Q96MU7 727 aaKnown RBP22.99■■□□□ 1.27
BRD2-213ENST00000495733 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
BRD2-213ENST00000495733 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
BRD2-213ENST00000495733 BCL11AQ9H165 835 aa22.81■■□□□ 1.24
BRD2-213ENST00000495733 DIEXFQ68CQ4 756 aaKnown RBP22.75■■□□□ 1.23
BRD2-213ENST00000495733 CCER1Q8TC90 406 aaPredicted RBP22.66■■□□□ 1.22
BRD2-213ENST00000495733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.66■■□□□ 1.22
BRD2-213ENST00000495733 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
BRD2-213ENST00000495733 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
BRD2-213ENST00000495733 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
BRD2-213ENST00000495733 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
BRD2-213ENST00000495733 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
BRD2-213ENST00000495733 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
BRD2-213ENST00000495733 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.17
BRD2-213ENST00000495733 ANP32EQ9BTT0 268 aa22.31■■□□□ 1.16
BRD2-213ENST00000495733 PRKCSHP14314 528 aaPredicted RBP22.25■■□□□ 1.15
BRD2-213ENST00000495733 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
BRD2-213ENST00000495733 NACADO15069 1562 aa22.24■■□□□ 1.15
BRD2-213ENST00000495733 WIZO95785 1651 aa22.21■■□□□ 1.15
BRD2-213ENST00000495733 MIER1Q8N108 512 aa22.1■■□□□ 1.13
BRD2-213ENST00000495733 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
BRD2-213ENST00000495733 BCANQ96GW7 911 aa21.97■■□□□ 1.11
BRD2-213ENST00000495733 TSHZ2Q9NRE2 1034 aa21.95■■□□□ 1.1
BRD2-213ENST00000495733 SUPT16HQ9Y5B9 1047 aaKnown RBP21.89■■□□□ 1.1
BRD2-213ENST00000495733 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
BRD2-213ENST00000495733 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
BRD2-213ENST00000495733 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
BRD2-213ENST00000495733 BAZ1AQ9NRL2 1556 aaPredicted RBP21.76■■□□□ 1.07
BRD2-213ENST00000495733 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
BRD2-213ENST00000495733 ERICH6Q7L0X2 663 aa21.68■■□□□ 1.06
BRD2-213ENST00000495733 SMARCA4P51532 1647 aa21.68■■□□□ 1.06
BRD2-213ENST00000495733 SOGA1O94964 1423 aa21.61■■□□□ 1.05
BRD2-213ENST00000495733 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
BRD2-213ENST00000495733 RUSC2Q8N2Y8 1516 aa21.58■■□□□ 1.05
BRD2-213ENST00000495733 BICRAQ9NZM4 1560 aa21.58■■□□□ 1.05
BRD2-213ENST00000495733 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
BRD2-213ENST00000495733 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
BRD2-213ENST00000495733 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
BRD2-213ENST00000495733 ITGAEP38570 1179 aa21.51■■□□□ 1.03
BRD2-213ENST00000495733 FKBP8Q14318 412 aa21.49■■□□□ 1.03
BRD2-213ENST00000495733 ANO8Q9HCE9 1232 aaPredicted RBP21.48■■□□□ 1.03
BRD2-213ENST00000495733 RBM19Q9Y4C8 960 aaKnown RBP21.46■■□□□ 1.03
BRD2-213ENST00000495733 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
BRD2-213ENST00000495733 CLSPNQ9HAW4 1339 aa21.36■■□□□ 1.01
BRD2-213ENST00000495733 NEFLP07196 543 aa21.35■■□□□ 1.01
BRD2-213ENST00000495733 CCDC136Q96JN2 1154 aa21.34■■□□□ 1.01
BRD2-213ENST00000495733 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
BRD2-213ENST00000495733 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
BRD2-213ENST00000495733 WRNQ14191 1432 aaPredicted RBP eCLIP21.26■□□□□ 0.99
BRD2-213ENST00000495733 CEP162Q5TB80 1403 aa21.25■□□□□ 0.99
BRD2-213ENST00000495733 DEKP35659 375 aaKnown RBP21.24■□□□□ 0.99
BRD2-213ENST00000495733 MSH5O43196 834 aa21.23■□□□□ 0.99
BRD2-213ENST00000495733 KCNH8Q96L42 1107 aa21.21■□□□□ 0.99
BRD2-213ENST00000495733 NBR1Q14596 966 aa21.19■□□□□ 0.98
BRD2-213ENST00000495733 RTN4Q9NQC3 1192 aaKnown RBP21.19■□□□□ 0.98
BRD2-213ENST00000495733 SALL2Q9Y467 1007 aaPredicted RBP21.17■□□□□ 0.98
BRD2-213ENST00000495733 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
BRD2-213ENST00000495733 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.14■□□□□ 0.97
BRD2-213ENST00000495733 APLP2Q06481 763 aa21.06■□□□□ 0.96
BRD2-213ENST00000495733 TRIM52Q96A61 297 aa21.06■□□□□ 0.96
BRD2-213ENST00000495733 IRX6P78412 446 aaPredicted RBP21.04■□□□□ 0.96
BRD2-213ENST00000495733 TNIKQ9UKE5 1360 aa21.02■□□□□ 0.96
BRD2-213ENST00000495733 RAPGEF2Q9Y4G8 1499 aa20.99■□□□□ 0.95
BRD2-213ENST00000495733 CDK11AQ9UQ88 783 aaPredicted RBP20.99■□□□□ 0.95
BRD2-213ENST00000495733 GOLGA3Q08378 1498 aa20.95■□□□□ 0.95
BRD2-213ENST00000495733 EIF5BO60841 1220 aaKnown RBP20.95■□□□□ 0.94
BRD2-213ENST00000495733 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
BRD2-213ENST00000495733 CLIP1P30622 1438 aa20.9■□□□□ 0.94
BRD2-213ENST00000495733 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
BRD2-213ENST00000495733 RTL5Q5HYW3 569 aaPredicted RBP20.84■□□□□ 0.93
BRD2-213ENST00000495733 IL27Q8NEV9 243 aa20.84■□□□□ 0.93
BRD2-213ENST00000495733 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.92
BRD2-213ENST00000495733 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
BRD2-213ENST00000495733 MYT1LQ9UL68 1186 aa20.82■□□□□ 0.92
BRD2-213ENST00000495733 EEA1Q15075 1411 aa20.81■□□□□ 0.92
BRD2-213ENST00000495733 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms