RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
NECAP1-223ENST00000640091 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
NECAP1-223ENST00000640091 ZCCHC6Q5VYS8 1495 aaKnown RBP19.97■□□□□ 0.79
NECAP1-223ENST00000640091 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
NECAP1-223ENST00000640091 ABCC9O60706 1549 aa19.91■□□□□ 0.78
NECAP1-223ENST00000640091 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
NECAP1-223ENST00000640091 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
NECAP1-223ENST00000640091 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
NECAP1-223ENST00000640091 NACADO15069 1562 aa19.38■□□□□ 0.69
NECAP1-223ENST00000640091 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
NECAP1-223ENST00000640091 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
NECAP1-223ENST00000640091 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
NECAP1-223ENST00000640091 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
NECAP1-223ENST00000640091 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
NECAP1-223ENST00000640091 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
NECAP1-223ENST00000640091 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
NECAP1-223ENST00000640091 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
NECAP1-223ENST00000640091 MROH2BQ7Z745 1585 aa18.45■□□□□ 0.54
NECAP1-223ENST00000640091 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
NECAP1-223ENST00000640091 SMARCA4P51532 1647 aa18.32■□□□□ 0.52
NECAP1-223ENST00000640091 WIZO95785 1651 aa18.28■□□□□ 0.52
NECAP1-223ENST00000640091 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
NECAP1-223ENST00000640091 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
NECAP1-223ENST00000640091 PEG3Q9GZU2 1588 aa18.06■□□□□ 0.48
NECAP1-223ENST00000640091 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
NECAP1-223ENST00000640091 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
NECAP1-223ENST00000640091 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
NECAP1-223ENST00000640091 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
NECAP1-223ENST00000640091 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
NECAP1-223ENST00000640091 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
NECAP1-223ENST00000640091 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
NECAP1-223ENST00000640091 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
NECAP1-223ENST00000640091 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
NECAP1-223ENST00000640091 TRIM41Q8WV44 630 aa17.61■□□□□ 0.41
NECAP1-223ENST00000640091 CFTRP13569 1480 aa17.53■□□□□ 0.4
NECAP1-223ENST00000640091 ABCC8Q09428 1581 aa17.52■□□□□ 0.4
NECAP1-223ENST00000640091 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.4
NECAP1-223ENST00000640091 NESP48681 1621 aa17.44■□□□□ 0.38
NECAP1-223ENST00000640091 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
NECAP1-223ENST00000640091 FAM9AQ8IZU1 332 aaPredicted RBP17.36■□□□□ 0.37
NECAP1-223ENST00000640091 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
NECAP1-223ENST00000640091 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
NECAP1-223ENST00000640091 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
NECAP1-223ENST00000640091 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
NECAP1-223ENST00000640091 LOC105371045A0A1W2PR82 267 aa17.24■□□□□ 0.35
NECAP1-223ENST00000640091 CUX1P39880 1505 aa17.24■□□□□ 0.35
NECAP1-223ENST00000640091 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
NECAP1-223ENST00000640091 TOP2BQ02880 1626 aa17.21■□□□□ 0.35
NECAP1-223ENST00000640091 SOGA1O94964 1423 aa17.21■□□□□ 0.35
NECAP1-223ENST00000640091 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
NECAP1-223ENST00000640091 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
NECAP1-223ENST00000640091 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
NECAP1-223ENST00000640091 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
NECAP1-223ENST00000640091 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
NECAP1-223ENST00000640091 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
NECAP1-223ENST00000640091 TOPBP1Q92547 1522 aa17.1■□□□□ 0.33
NECAP1-223ENST00000640091 FGD5Q6ZNL6 1462 aa17.08■□□□□ 0.32
NECAP1-223ENST00000640091 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
NECAP1-223ENST00000640091 DNMBPQ6XZF7 1577 aa17.07■□□□□ 0.32
NECAP1-223ENST00000640091 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
NECAP1-223ENST00000640091 EEA1Q15075 1411 aa17.02■□□□□ 0.31
NECAP1-223ENST00000640091 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.31
NECAP1-223ENST00000640091 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.31
NECAP1-223ENST00000640091 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
NECAP1-223ENST00000640091 CUX2O14529 1486 aa16.97■□□□□ 0.31
NECAP1-223ENST00000640091 KIF27Q86VH2 1401 aa16.96■□□□□ 0.31
NECAP1-223ENST00000640091 UBTFP17480 764 aaKnown RBP16.9■□□□□ 0.3
NECAP1-223ENST00000640091 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
NECAP1-223ENST00000640091 ABCA10Q8WWZ4 1543 aa16.89■□□□□ 0.29
NECAP1-223ENST00000640091 WDR62O43379 1518 aa16.89■□□□□ 0.29
NECAP1-223ENST00000640091 IGF1RP08069 1367 aa16.87■□□□□ 0.29
NECAP1-223ENST00000640091 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
NECAP1-223ENST00000640091 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
NECAP1-223ENST00000640091 GOLGA3Q08378 1498 aa16.82■□□□□ 0.28
NECAP1-223ENST00000640091 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
NECAP1-223ENST00000640091 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
NECAP1-223ENST00000640091 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.281e-6■■□□□ 13.1
NECAP1-223ENST00000640091 KIF21BO75037 1637 aa16.79■□□□□ 0.28
NECAP1-223ENST00000640091 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
NECAP1-223ENST00000640091 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
NECAP1-223ENST00000640091 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
NECAP1-223ENST00000640091 WDR97A6NE52 1622 aa16.77■□□□□ 0.28
NECAP1-223ENST00000640091 IFT140Q96RY7 1462 aa16.77■□□□□ 0.28
NECAP1-223ENST00000640091 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
NECAP1-223ENST00000640091 RANGAP1P46060 587 aaPredicted RBP16.75■□□□□ 0.27
NECAP1-223ENST00000640091 ABCA5Q8WWZ7 1642 aa16.73■□□□□ 0.27
NECAP1-223ENST00000640091 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
NECAP1-223ENST00000640091 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
NECAP1-223ENST00000640091 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
NECAP1-223ENST00000640091 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
NECAP1-223ENST00000640091 CUL7Q14999 1698 aa16.61■□□□□ 0.25
NECAP1-223ENST00000640091 PBRM1Q86U86 1689 aa16.6■□□□□ 0.25
NECAP1-223ENST00000640091 CLIP1P30622 1438 aa16.59■□□□□ 0.25
NECAP1-223ENST00000640091 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
NECAP1-223ENST00000640091 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
NECAP1-223ENST00000640091 FBLN2P98095 1184 aa16.55■□□□□ 0.24
NECAP1-223ENST00000640091 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
NECAP1-223ENST00000640091 ADAMTS12P58397 1594 aa16.52■□□□□ 0.23
NECAP1-223ENST00000640091 PPARGC1BQ86YN6 1023 aaKnown RBP16.49■□□□□ 0.23
NECAP1-223ENST00000640091 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms