RNA–Protein interactions for RNA: ENST00000547398.1

ZFC3H1-205, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 2

Gene ZFC3H1, Length 470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-205ENST00000547398 AEBP2Q6ZN18 517 aaPredicted RBP29.67■■■□□ 2.34
ZFC3H1-205ENST00000547398 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
ZFC3H1-205ENST00000547398 PHF23Q9BUL5 403 aaPredicted RBP25.64■■□□□ 1.7
ZFC3H1-205ENST00000547398 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
ZFC3H1-205ENST00000547398 PLPPR3Q6T4P5 718 aa23.93■■□□□ 1.42
ZFC3H1-205ENST00000547398 FOXD1Q16676 465 aa23.66■■□□□ 1.38
ZFC3H1-205ENST00000547398 ADRA2BP18089 450 aa22.5■■□□□ 1.19
ZFC3H1-205ENST00000547398 PPP6R1Q9UPN7 881 aa22.46■■□□□ 1.19
ZFC3H1-205ENST00000547398 POTEDQ86YR6 584 aa22.4■■□□□ 1.18
ZFC3H1-205ENST00000547398 MSH5O43196 834 aa22.23■■□□□ 1.15
ZFC3H1-205ENST00000547398 PIAS4Q8N2W9 510 aaPredicted RBP21.97■■□□□ 1.11
ZFC3H1-205ENST00000547398 KCNA4P22459 653 aa21.14■□□□□ 0.97
ZFC3H1-205ENST00000547398 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
ZFC3H1-205ENST00000547398 NCBP3Q53F19 620 aaKnown RBP20.76■□□□□ 0.91
ZFC3H1-205ENST00000547398 SCAF1Q9H7N4 1312 aaKnown RBP20.68■□□□□ 0.9
ZFC3H1-205ENST00000547398 CNKSR2Q8WXI2 1034 aa20.44■□□□□ 0.86
ZFC3H1-205ENST00000547398 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
ZFC3H1-205ENST00000547398 SLC4A1APQ9BWU0 796 aaKnown RBP20.26■□□□□ 0.83
ZFC3H1-205ENST00000547398 MAPK8IP2Q13387 824 aaPredicted RBP20.25■□□□□ 0.83
ZFC3H1-205ENST00000547398 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
ZFC3H1-205ENST00000547398 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
ZFC3H1-205ENST00000547398 RNF216Q9NWF9 866 aaPredicted RBP19.92■□□□□ 0.78
ZFC3H1-205ENST00000547398 CSRNP3Q8WYN3 585 aa19.72■□□□□ 0.75
ZFC3H1-205ENST00000547398 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
ZFC3H1-205ENST00000547398 HOXD11P31277 338 aaPredicted RBP19.69■□□□□ 0.74
ZFC3H1-205ENST00000547398 ZBTB22O15209 634 aa19.43■□□□□ 0.7
ZFC3H1-205ENST00000547398 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
ZFC3H1-205ENST00000547398 CACNB1Q02641 598 aaPredicted RBP19.3■□□□□ 0.68
ZFC3H1-205ENST00000547398 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
ZFC3H1-205ENST00000547398 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
ZFC3H1-205ENST00000547398 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
ZFC3H1-205ENST00000547398 MYCNP04198 464 aaPredicted RBP18.88■□□□□ 0.61
ZFC3H1-205ENST00000547398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
ZFC3H1-205ENST00000547398 ATXN8OSP0DMR3 200 aa18.65■□□□□ 0.58
ZFC3H1-205ENST00000547398 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
ZFC3H1-205ENST00000547398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
ZFC3H1-205ENST00000547398 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
ZFC3H1-205ENST00000547398 U3KPZ7 1027 aaPredicted RBP18.51■□□□□ 0.55
ZFC3H1-205ENST00000547398 SAMD1Q6SPF0 538 aaPredicted RBP18.47■□□□□ 0.55
ZFC3H1-205ENST00000547398 APLP2Q06481 763 aa18.26■□□□□ 0.51
ZFC3H1-205ENST00000547398 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
ZFC3H1-205ENST00000547398 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
ZFC3H1-205ENST00000547398 FKBP8Q14318 412 aa17.85■□□□□ 0.45
ZFC3H1-205ENST00000547398 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
ZFC3H1-205ENST00000547398 TRHP20396 242 aaPredicted RBP17.84■□□□□ 0.45
ZFC3H1-205ENST00000547398 CAPN15O75808 1086 aa17.82■□□□□ 0.44
ZFC3H1-205ENST00000547398 DSG3P32926 999 aa17.65■□□□□ 0.42
ZFC3H1-205ENST00000547398 POLA2Q14181 598 aa17.64■□□□□ 0.41
ZFC3H1-205ENST00000547398 FBLN2P98095 1184 aa17.57■□□□□ 0.4
ZFC3H1-205ENST00000547398 ABCB7O75027 752 aa17.5■□□□□ 0.39
ZFC3H1-205ENST00000547398 MKRN4PQ13434 485 aaPredicted RBP17.49■□□□□ 0.39
ZFC3H1-205ENST00000547398 POTEHQ6S545 545 aa17.46■□□□□ 0.39
ZFC3H1-205ENST00000547398 ZBTB12Q9Y330 459 aaPredicted RBP17.46■□□□□ 0.39
ZFC3H1-205ENST00000547398 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
ZFC3H1-205ENST00000547398 FBXO3Q9UK99 471 aa17.14■□□□□ 0.33
ZFC3H1-205ENST00000547398 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
ZFC3H1-205ENST00000547398 PROM2Q8N271 834 aa17.12■□□□□ 0.33
ZFC3H1-205ENST00000547398 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
ZFC3H1-205ENST00000547398 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
ZFC3H1-205ENST00000547398 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
ZFC3H1-205ENST00000547398 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
ZFC3H1-205ENST00000547398 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
ZFC3H1-205ENST00000547398 SPDYE2Q495Y8 402 aa16.98■□□□□ 0.31
ZFC3H1-205ENST00000547398 SSUH2Q9Y2M2 353 aa16.86■□□□□ 0.29
ZFC3H1-205ENST00000547398 VASPP50552 380 aaPredicted RBP16.85■□□□□ 0.29
ZFC3H1-205ENST00000547398 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
ZFC3H1-205ENST00000547398 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
ZFC3H1-205ENST00000547398 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
ZFC3H1-205ENST00000547398 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
ZFC3H1-205ENST00000547398 CHRDL2Q6WN34 429 aa16.6■□□□□ 0.25
ZFC3H1-205ENST00000547398 PLCD3Q8N3E9 789 aa16.51■□□□□ 0.23
ZFC3H1-205ENST00000547398 KLHL34Q8N239 644 aa16.49■□□□□ 0.23
ZFC3H1-205ENST00000547398 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
ZFC3H1-205ENST00000547398 MIER1Q8N108 512 aa16.46■□□□□ 0.23
ZFC3H1-205ENST00000547398 PLEKHG5O94827 1062 aa16.41■□□□□ 0.22
ZFC3H1-205ENST00000547398 SPOCK2Q92563 424 aa16.4■□□□□ 0.22
ZFC3H1-205ENST00000547398 SPDYE1Q8NFV5 336 aaPredicted RBP16.38■□□□□ 0.21
ZFC3H1-205ENST00000547398 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.2
ZFC3H1-205ENST00000547398 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
ZFC3H1-205ENST00000547398 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
ZFC3H1-205ENST00000547398 PKD2Q13563 968 aa16.23■□□□□ 0.19
ZFC3H1-205ENST00000547398 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
ZFC3H1-205ENST00000547398 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
ZFC3H1-205ENST00000547398 SP7Q8TDD2 431 aaPredicted RBP16.18■□□□□ 0.18
ZFC3H1-205ENST00000547398 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
ZFC3H1-205ENST00000547398 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
ZFC3H1-205ENST00000547398 ECM2O94769 699 aaPredicted RBP16.11■□□□□ 0.17
ZFC3H1-205ENST00000547398 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
ZFC3H1-205ENST00000547398 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
ZFC3H1-205ENST00000547398 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
ZFC3H1-205ENST00000547398 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
ZFC3H1-205ENST00000547398 GSE1Q14687 1217 aa15.95■□□□□ 0.14
ZFC3H1-205ENST00000547398 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
ZFC3H1-205ENST00000547398 NUBP1P53384 320 aa15.94■□□□□ 0.14
ZFC3H1-205ENST00000547398 MNX1P50219 401 aaPredicted RBP15.92■□□□□ 0.14
ZFC3H1-205ENST00000547398 HAX1O00165 279 aa15.9■□□□□ 0.14
ZFC3H1-205ENST00000547398 RGL2O15211 777 aa15.89■□□□□ 0.13
ZFC3H1-205ENST00000547398 DCAF8Q5TAQ9 597 aa15.88■□□□□ 0.13
ZFC3H1-205ENST00000547398 FAM212AQ96EL1 285 aa15.88■□□□□ 0.13
ZFC3H1-205ENST00000547398 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms