RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 NISCHQ9Y2I1 1504 aa33.32■■■□□ 2.92
TRIM27-202ENST00000377199 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
TRIM27-202ENST00000377199 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
TRIM27-202ENST00000377199 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
TRIM27-202ENST00000377199 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
TRIM27-202ENST00000377199 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
TRIM27-202ENST00000377199 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
TRIM27-202ENST00000377199 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.96
TRIM27-202ENST00000377199 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
TRIM27-202ENST00000377199 LOC105371045A0A1W2PR82 267 aa26.8■■□□□ 1.88
TRIM27-202ENST00000377199 PCGF6Q9BYE7 350 aa26.79■■□□□ 1.88
TRIM27-202ENST00000377199 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
TRIM27-202ENST00000377199 ABCC9O60706 1549 aa26.57■■□□□ 1.84
TRIM27-202ENST00000377199 HRCP23327 699 aa26.53■■□□□ 1.84
TRIM27-202ENST00000377199 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
TRIM27-202ENST00000377199 EHMT2Q96KQ7 1210 aa26.4■■□□□ 1.82
TRIM27-202ENST00000377199 FAM9AQ8IZU1 332 aaPredicted RBP26.4■■□□□ 1.82
TRIM27-202ENST00000377199 TRIM41Q8WV44 630 aa26.34■■□□□ 1.81
TRIM27-202ENST00000377199 PPARGC1BQ86YN6 1023 aaKnown RBP26.29■■□□□ 1.8
TRIM27-202ENST00000377199 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
TRIM27-202ENST00000377199 CECR2Q9BXF3 1484 aa26.19■■□□□ 1.78
TRIM27-202ENST00000377199 NACADO15069 1562 aa26.07■■□□□ 1.76
TRIM27-202ENST00000377199 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
TRIM27-202ENST00000377199 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
TRIM27-202ENST00000377199 WIZO95785 1651 aa25.88■■□□□ 1.73
TRIM27-202ENST00000377199 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
TRIM27-202ENST00000377199 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
TRIM27-202ENST00000377199 TTBK1Q5TCY1 1321 aaPredicted RBP25.51■■□□□ 1.67
TRIM27-202ENST00000377199 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
TRIM27-202ENST00000377199 CCDC88BA6NC98 1476 aa25.37■■□□□ 1.65
TRIM27-202ENST00000377199 SMARCA4P51532 1647 aa25.35■■□□□ 1.65
TRIM27-202ENST00000377199 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
TRIM27-202ENST00000377199 TOP2AP11388 1531 aaKnown RBP25.33■■□□□ 1.64
TRIM27-202ENST00000377199 UNC13AQ9UPW8 1703 aa25.3■■□□□ 1.64
TRIM27-202ENST00000377199 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
TRIM27-202ENST00000377199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.24■■□□□ 1.63
TRIM27-202ENST00000377199 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
TRIM27-202ENST00000377199 SOGA1O94964 1423 aa25.21■■□□□ 1.63
TRIM27-202ENST00000377199 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
TRIM27-202ENST00000377199 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
TRIM27-202ENST00000377199 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
TRIM27-202ENST00000377199 CSRNP3Q8WYN3 585 aa25.06■■□□□ 1.6
TRIM27-202ENST00000377199 CEP162Q5TB80 1403 aa25.04■■□□□ 1.6
TRIM27-202ENST00000377199 BICRAQ9NZM4 1560 aa25.02■■□□□ 1.6
TRIM27-202ENST00000377199 RANGAP1P46060 587 aaPredicted RBP24.99■■□□□ 1.59
TRIM27-202ENST00000377199 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
TRIM27-202ENST00000377199 TNIKQ9UKE5 1360 aa24.88■■□□□ 1.57
TRIM27-202ENST00000377199 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
TRIM27-202ENST00000377199 EEA1Q15075 1411 aa24.78■■□□□ 1.56
TRIM27-202ENST00000377199 ATAD2BQ9ULI0 1458 aa24.78■■□□□ 1.56
TRIM27-202ENST00000377199 GOLGA3Q08378 1498 aa24.76■■□□□ 1.55
TRIM27-202ENST00000377199 SYNJ1O43426 1573 aa24.74■■□□□ 1.55
TRIM27-202ENST00000377199 HNRNPUL2Q1KMD3 747 aaKnown RBP24.69■■□□□ 1.54
TRIM27-202ENST00000377199 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
TRIM27-202ENST00000377199 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
TRIM27-202ENST00000377199 CLIP1P30622 1438 aa24.59■■□□□ 1.53
TRIM27-202ENST00000377199 APLP2Q06481 763 aa24.58■■□□□ 1.53
TRIM27-202ENST00000377199 SCAF1Q9H7N4 1312 aaKnown RBP24.55■■□□□ 1.52
TRIM27-202ENST00000377199 RAPGEF2Q9Y4G8 1499 aa24.55■■□□□ 1.52
TRIM27-202ENST00000377199 DIEXFQ68CQ4 756 aaKnown RBP24.54■■□□□ 1.52
TRIM27-202ENST00000377199 KIF21BO75037 1637 aa24.42■■□□□ 1.5
TRIM27-202ENST00000377199 VPS8Q8N3P4 1428 aa24.38■■□□□ 1.49
TRIM27-202ENST00000377199 NEUROD1Q13562 356 aa24.33■■□□□ 1.49
TRIM27-202ENST00000377199 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
TRIM27-202ENST00000377199 ZNF316A6NFI3 1004 aaPredicted RBP24.27■■□□□ 1.48
TRIM27-202ENST00000377199 ACIN1Q9UKV3 1341 aaKnown RBP24.26■■□□□ 1.47
TRIM27-202ENST00000377199 YTHDC1Q96MU7 727 aaKnown RBP24.25■■□□□ 1.47
TRIM27-202ENST00000377199 KANK4Q5T7N3 995 aaPredicted RBP24.2■■□□□ 1.46
TRIM27-202ENST00000377199 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
TRIM27-202ENST00000377199 CUX1P39880 1505 aa24.19■■□□□ 1.46
TRIM27-202ENST00000377199 ITGAEP38570 1179 aa24.15■■□□□ 1.46
TRIM27-202ENST00000377199 CENPBP07199 599 aaPredicted RBP24.15■■□□□ 1.46
TRIM27-202ENST00000377199 BIVM-ERCC5R4GMW8 1640 aa24.14■■□□□ 1.45
TRIM27-202ENST00000377199 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
TRIM27-202ENST00000377199 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
TRIM27-202ENST00000377199 GTF3C3Q9Y5Q9 886 aa24.12■■□□□ 1.45
TRIM27-202ENST00000377199 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
TRIM27-202ENST00000377199 ARAP1Q96P48 1450 aa24.08■■□□□ 1.45
TRIM27-202ENST00000377199 CFTRP13569 1480 aa24.05■■□□□ 1.44
TRIM27-202ENST00000377199 MIER1Q8N108 512 aa24.04■■□□□ 1.44
TRIM27-202ENST00000377199 ERICH3Q5RHP9 1530 aa24.02■■□□□ 1.44
TRIM27-202ENST00000377199 CUX2O14529 1486 aa23.98■■□□□ 1.43
TRIM27-202ENST00000377199 ATP1B4Q9UN42 357 aaPredicted RBP23.98■■□□□ 1.43
TRIM27-202ENST00000377199 P3H3Q8IVL6 736 aa23.97■■□□□ 1.43
TRIM27-202ENST00000377199 ARHGAP35Q9NRY4 1499 aa23.9■■□□□ 1.42
TRIM27-202ENST00000377199 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
TRIM27-202ENST00000377199 IGF1RP08069 1367 aa23.88■■□□□ 1.41
TRIM27-202ENST00000377199 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
TRIM27-202ENST00000377199 CARMIL1Q5VZK9 1371 aa23.82■■□□□ 1.4
TRIM27-202ENST00000377199 FGD5Q6ZNL6 1462 aa23.82■■□□□ 1.4
TRIM27-202ENST00000377199 CCNB3Q8WWL7 1395 aa23.8■■□□□ 1.4
TRIM27-202ENST00000377199 FAM50AQ14320 339 aaKnown RBP23.76■■□□□ 1.39
TRIM27-202ENST00000377199 RRBP1Q9P2E9 1410 aaKnown RBP23.73■■□□□ 1.39
TRIM27-202ENST00000377199 PELP1Q8IZL8 1130 aaKnown RBP23.73■■□□□ 1.39
TRIM27-202ENST00000377199 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
TRIM27-202ENST00000377199 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
TRIM27-202ENST00000377199 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
TRIM27-202ENST00000377199 CLSPNQ9HAW4 1339 aa23.66■■□□□ 1.38
TRIM27-202ENST00000377199 NESP48681 1621 aa23.64■■□□□ 1.38
TRIM27-202ENST00000377199 RAB3GAP2Q9H2M9 1393 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms