RNA–Protein interactions for RNA: ENST00000463098.5

RBM39-224, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-224ENST00000463098 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
RBM39-224ENST00000463098 CCDC180Q9P1Z9 1646 aa31.07■■■□□ 2.56
RBM39-224ENST00000463098 ABCC9O60706 1549 aa29.75■■■□□ 2.35
RBM39-224ENST00000463098 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
RBM39-224ENST00000463098 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
RBM39-224ENST00000463098 MYO15BQ96JP2 1530 aa29.19■■■□□ 2.26
RBM39-224ENST00000463098 NACADO15069 1562 aa29.04■■■□□ 2.24
RBM39-224ENST00000463098 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
RBM39-224ENST00000463098 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
RBM39-224ENST00000463098 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
RBM39-224ENST00000463098 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
RBM39-224ENST00000463098 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
RBM39-224ENST00000463098 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
RBM39-224ENST00000463098 PABPN1Q86U42 306 aaKnown RBP eCLIP27.8■■■□□ 2.04
RBM39-224ENST00000463098 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
RBM39-224ENST00000463098 CECR2Q9BXF3 1484 aa27.29■■□□□ 1.96
RBM39-224ENST00000463098 BAZ1AQ9NRL2 1556 aaPredicted RBP27.24■■□□□ 1.95
RBM39-224ENST00000463098 EIF4G1Q04637 1599 aaKnown RBP27.21■■□□□ 1.95
RBM39-224ENST00000463098 SMARCA4P51532 1647 aa27.17■■□□□ 1.94
RBM39-224ENST00000463098 MROH2BQ7Z745 1585 aa27.1■■□□□ 1.93
RBM39-224ENST00000463098 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
RBM39-224ENST00000463098 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
RBM39-224ENST00000463098 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
RBM39-224ENST00000463098 CC2D2AQ9P2K1 1620 aa26.92■■□□□ 1.9
RBM39-224ENST00000463098 SMARCA2P51531 1590 aa26.87■■□□□ 1.89
RBM39-224ENST00000463098 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
RBM39-224ENST00000463098 WIZO95785 1651 aa26.8■■□□□ 1.88
RBM39-224ENST00000463098 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
RBM39-224ENST00000463098 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
RBM39-224ENST00000463098 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
RBM39-224ENST00000463098 TOP2AP11388 1531 aaKnown RBP26.63■■□□□ 1.85
RBM39-224ENST00000463098 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
RBM39-224ENST00000463098 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
RBM39-224ENST00000463098 CFTRP13569 1480 aa26.02■■□□□ 1.76
RBM39-224ENST00000463098 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
RBM39-224ENST00000463098 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
RBM39-224ENST00000463098 NESP48681 1621 aa25.85■■□□□ 1.73
RBM39-224ENST00000463098 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
RBM39-224ENST00000463098 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
RBM39-224ENST00000463098 PDS5BQ9NTI5 1447 aa25.72■■□□□ 1.71
RBM39-224ENST00000463098 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
RBM39-224ENST00000463098 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
RBM39-224ENST00000463098 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.69
RBM39-224ENST00000463098 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
RBM39-224ENST00000463098 ABCC8Q09428 1581 aa25.44■■□□□ 1.66
RBM39-224ENST00000463098 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
RBM39-224ENST00000463098 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
RBM39-224ENST00000463098 DNAJC5Q9H3Z4 198 aa25.43■■□□□ 1.66
RBM39-224ENST00000463098 WRNQ14191 1432 aaPredicted RBP eCLIP25.43■■□□□ 1.66
RBM39-224ENST00000463098 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
RBM39-224ENST00000463098 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.66
RBM39-224ENST00000463098 WDR62O43379 1518 aa25.39■■□□□ 1.66
RBM39-224ENST00000463098 CUX1P39880 1505 aa25.39■■□□□ 1.66
RBM39-224ENST00000463098 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
RBM39-224ENST00000463098 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
RBM39-224ENST00000463098 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
RBM39-224ENST00000463098 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
RBM39-224ENST00000463098 POLA1P09884 1462 aaPredicted RBP25.19■■□□□ 1.62
RBM39-224ENST00000463098 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
RBM39-224ENST00000463098 CUX2O14529 1486 aa25.18■■□□□ 1.62
RBM39-224ENST00000463098 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
RBM39-224ENST00000463098 TARBP1Q13395 1621 aaKnown RBP25.07■■□□□ 1.6
RBM39-224ENST00000463098 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
RBM39-224ENST00000463098 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
RBM39-224ENST00000463098 SOGA1O94964 1423 aa25.03■■□□□ 1.6
RBM39-224ENST00000463098 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
RBM39-224ENST00000463098 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
RBM39-224ENST00000463098 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
RBM39-224ENST00000463098 EEA1Q15075 1411 aa24.85■■□□□ 1.57
RBM39-224ENST00000463098 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
RBM39-224ENST00000463098 ZNF608Q9ULD9 1512 aaPredicted RBP24.84■■□□□ 1.57
RBM39-224ENST00000463098 EIF4G3O43432 1585 aaKnown RBP24.81■■□□□ 1.56
RBM39-224ENST00000463098 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
RBM39-224ENST00000463098 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
RBM39-224ENST00000463098 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
RBM39-224ENST00000463098 AQRO60306 1485 aaKnown RBP eCLIP24.75■■□□□ 1.553e-11■■■■■ 27.2
RBM39-224ENST00000463098 ERICH3Q5RHP9 1530 aa24.75■■□□□ 1.55
RBM39-224ENST00000463098 GRIN2BQ13224 1484 aa24.72■■□□□ 1.55
RBM39-224ENST00000463098 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
RBM39-224ENST00000463098 IGF1RP08069 1367 aa24.68■■□□□ 1.54
RBM39-224ENST00000463098 CUL7Q14999 1698 aa24.62■■□□□ 1.53
RBM39-224ENST00000463098 MAGI1Q96QZ7 1491 aaPredicted RBP24.62■■□□□ 1.53
RBM39-224ENST00000463098 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
RBM39-224ENST00000463098 ADAMTS12P58397 1594 aa24.59■■□□□ 1.53
RBM39-224ENST00000463098 CSRNP3Q8WYN3 585 aa24.59■■□□□ 1.53
RBM39-224ENST00000463098 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
RBM39-224ENST00000463098 FHAD1B1AJZ9 1412 aa24.54■■□□□ 1.52
RBM39-224ENST00000463098 KIF21BO75037 1637 aa24.53■■□□□ 1.52
RBM39-224ENST00000463098 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
RBM39-224ENST00000463098 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
RBM39-224ENST00000463098 FAM9AQ8IZU1 332 aaPredicted RBP24.48■■□□□ 1.51
RBM39-224ENST00000463098 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
RBM39-224ENST00000463098 GRIN2AQ12879 1464 aa24.41■■□□□ 1.5
RBM39-224ENST00000463098 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
RBM39-224ENST00000463098 CHD1O14646 1710 aa24.35■■□□□ 1.49
RBM39-224ENST00000463098 NUP160Q12769 1436 aa24.33■■□□□ 1.49
RBM39-224ENST00000463098 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
RBM39-224ENST00000463098 CEP170Q5SW79 1584 aa24.26■■□□□ 1.47
RBM39-224ENST00000463098 CTTNBP2Q8WZ74 1663 aa24.21■■□□□ 1.47
RBM39-224ENST00000463098 KIAA0586Q9BVV6 1533 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms