RNA–Protein interactions for RNA: ENST00000602061.5

SYMPK-218, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-218ENST00000602061 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
SYMPK-218ENST00000602061 ABCC9O60706 1549 aa28.89■■■□□ 2.22
SYMPK-218ENST00000602061 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
SYMPK-218ENST00000602061 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
SYMPK-218ENST00000602061 NACADO15069 1562 aa27.22■■□□□ 1.95
SYMPK-218ENST00000602061 DNAJC5BQ9UF47 199 aa27.1■■□□□ 1.93
SYMPK-218ENST00000602061 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
SYMPK-218ENST00000602061 PABPN1Q86U42 306 aaKnown RBP eCLIP26.84■■□□□ 1.89
SYMPK-218ENST00000602061 MYO15BQ96JP2 1530 aa26.77■■□□□ 1.88
SYMPK-218ENST00000602061 UNC13AQ9UPW8 1703 aa26.72■■□□□ 1.87
SYMPK-218ENST00000602061 BICRAQ9NZM4 1560 aa26.56■■□□□ 1.84
SYMPK-218ENST00000602061 ZCCHC6Q5VYS8 1495 aaKnown RBP26.43■■□□□ 1.82
SYMPK-218ENST00000602061 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
SYMPK-218ENST00000602061 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
SYMPK-218ENST00000602061 SCRIBQ14160 1630 aa26.19■■□□□ 1.78
SYMPK-218ENST00000602061 CC2D2AQ9P2K1 1620 aa26.07■■□□□ 1.76
SYMPK-218ENST00000602061 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
SYMPK-218ENST00000602061 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
SYMPK-218ENST00000602061 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
SYMPK-218ENST00000602061 DNAJC5Q9H3Z4 198 aa25.09■■□□□ 1.61
SYMPK-218ENST00000602061 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
SYMPK-218ENST00000602061 CUX2O14529 1486 aa25.01■■□□□ 1.59
SYMPK-218ENST00000602061 ATAD2BQ9ULI0 1458 aa25■■□□□ 1.59
SYMPK-218ENST00000602061 SMARCA2P51531 1590 aa24.98■■□□□ 1.59
SYMPK-218ENST00000602061 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
SYMPK-218ENST00000602061 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
SYMPK-218ENST00000602061 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
SYMPK-218ENST00000602061 BAZ1BQ9UIG0 1483 aaKnown RBP24.81■■□□□ 1.56
SYMPK-218ENST00000602061 NESP48681 1621 aa24.72■■□□□ 1.55
SYMPK-218ENST00000602061 PEG3Q9GZU2 1588 aa24.68■■□□□ 1.54
SYMPK-218ENST00000602061 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
SYMPK-218ENST00000602061 MROH2BQ7Z745 1585 aa24.56■■□□□ 1.52
SYMPK-218ENST00000602061 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
SYMPK-218ENST00000602061 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
SYMPK-218ENST00000602061 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
SYMPK-218ENST00000602061 CADPSQ9ULU8 1353 aa24.34■■□□□ 1.49
SYMPK-218ENST00000602061 MRC2Q9UBG0 1479 aa24.27■■□□□ 1.48
SYMPK-218ENST00000602061 WIZO95785 1651 aa24.26■■□□□ 1.47
SYMPK-218ENST00000602061 WDR62O43379 1518 aa24.19■■□□□ 1.46
SYMPK-218ENST00000602061 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
SYMPK-218ENST00000602061 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
SYMPK-218ENST00000602061 CFTRP13569 1480 aa24.01■■□□□ 1.43
SYMPK-218ENST00000602061 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
SYMPK-218ENST00000602061 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
SYMPK-218ENST00000602061 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
SYMPK-218ENST00000602061 URB2Q14146 1524 aaKnown RBP23.85■■□□□ 1.41
SYMPK-218ENST00000602061 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
SYMPK-218ENST00000602061 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
SYMPK-218ENST00000602061 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
SYMPK-218ENST00000602061 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
SYMPK-218ENST00000602061 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
SYMPK-218ENST00000602061 ABCC8Q09428 1581 aa23.58■■□□□ 1.37
SYMPK-218ENST00000602061 ZNF608Q9ULD9 1512 aaPredicted RBP23.58■■□□□ 1.36
SYMPK-218ENST00000602061 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
SYMPK-218ENST00000602061 RIMBP3CA6NJZ7 1639 aa23.5■■□□□ 1.35
SYMPK-218ENST00000602061 RIMBP3BA6NNM3 1639 aa23.5■■□□□ 1.35
SYMPK-218ENST00000602061 RIMBP3Q9UFD9 1639 aa23.5■■□□□ 1.35
SYMPK-218ENST00000602061 EIF4G3O43432 1585 aaKnown RBP23.49■■□□□ 1.35
SYMPK-218ENST00000602061 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
SYMPK-218ENST00000602061 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
SYMPK-218ENST00000602061 AQRO60306 1485 aaKnown RBP eCLIP23.36■■□□□ 1.331e-8■■■■■ 50.4
SYMPK-218ENST00000602061 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
SYMPK-218ENST00000602061 FBLN2P98095 1184 aa23.32■■□□□ 1.32
SYMPK-218ENST00000602061 CHD1O14646 1710 aa23.32■■□□□ 1.32
SYMPK-218ENST00000602061 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
SYMPK-218ENST00000602061 SOGA1O94964 1423 aa23.25■■□□□ 1.31
SYMPK-218ENST00000602061 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
SYMPK-218ENST00000602061 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
SYMPK-218ENST00000602061 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
SYMPK-218ENST00000602061 FGD5Q6ZNL6 1462 aa23.18■■□□□ 1.3
SYMPK-218ENST00000602061 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
SYMPK-218ENST00000602061 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
SYMPK-218ENST00000602061 TRHP20396 242 aaPredicted RBP23.12■■□□□ 1.29
SYMPK-218ENST00000602061 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
SYMPK-218ENST00000602061 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
SYMPK-218ENST00000602061 CUX1P39880 1505 aa23.1■■□□□ 1.29
SYMPK-218ENST00000602061 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
SYMPK-218ENST00000602061 GRIN2BQ13224 1484 aa23.09■■□□□ 1.29
SYMPK-218ENST00000602061 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
SYMPK-218ENST00000602061 SYNJ2O15056 1496 aa23.03■■□□□ 1.28
SYMPK-218ENST00000602061 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
SYMPK-218ENST00000602061 PBRM1Q86U86 1689 aa22.96■■□□□ 1.27
SYMPK-218ENST00000602061 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
SYMPK-218ENST00000602061 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
SYMPK-218ENST00000602061 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
SYMPK-218ENST00000602061 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
SYMPK-218ENST00000602061 GRIN2AQ12879 1464 aa22.78■■□□□ 1.24
SYMPK-218ENST00000602061 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
SYMPK-218ENST00000602061 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
SYMPK-218ENST00000602061 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
SYMPK-218ENST00000602061 FHAD1B1AJZ9 1412 aa22.68■■□□□ 1.22
SYMPK-218ENST00000602061 NUP160Q12769 1436 aa22.68■■□□□ 1.22
SYMPK-218ENST00000602061 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
SYMPK-218ENST00000602061 ERICH3Q5RHP9 1530 aa22.64■■□□□ 1.21
SYMPK-218ENST00000602061 ERCC6L2Q5T890 1561 aa22.63■■□□□ 1.21
SYMPK-218ENST00000602061 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
SYMPK-218ENST00000602061 SHROOM2Q13796 1616 aa22.58■■□□□ 1.21
SYMPK-218ENST00000602061 PRG4Q92954 1404 aaPredicted RBP22.5■■□□□ 1.19
SYMPK-218ENST00000602061 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
SYMPK-218ENST00000602061 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms