Protein–RNA interactions for Protein: P35637

FUS, RNA-binding protein FUS, humanhuman

Known RBP eCLIP

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUSP35637 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.544e-7■■■□□ 15.3
FUSP35637 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.21□□□□□ -0.784e-7■■■□□ 15.3
FUSP35637 SQSTM1-205ENST00000464493 532 ntTSL 49.59□□□□□ -0.874e-7■■■□□ 15.3
FUSP35637 SQSTM1-207ENST00000481335 562 ntTSL 48.09□□□□□ -1.114e-7■■■□□ 15.3
FUSP35637 SQSTM1-203ENST00000422245 628 ntTSL 47.78□□□□□ -1.164e-7■■■□□ 15.3
FUSP35637 MIR600HG-202ENST00000545631 5977 nt11.97□□□□□ -0.491e-6■■■□□ 15.3
FUSP35637 MIR600HG-201ENST00000449175 5984 ntBASIC11.97□□□□□ -0.491e-6■■■□□ 15.3
FUSP35637 NEAT1-202ENST00000501122 22743 ntBASIC3.93□□□□□ -1.782e-22■■■□□ 15.3
FUSP35637 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.71■□□□□ 0.754e-6■■■□□ 15.3
FUSP35637 PAPD7-206ENST00000515721 603 ntTSL 318.86■□□□□ 0.614e-6■■■□□ 15.3
FUSP35637 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.884e-6■■■□□ 15.3
FUSP35637 SEMA4C-203ENST00000449330 839 ntTSL 39.73□□□□□ -0.855e-7■■■□□ 15.3
FUSP35637 UBE2K-207ENST00000513231 871 ntTSL 1 (best)16.1■□□□□ 0.171e-8■■■□□ 15.3
FUSP35637 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.051e-8■■■□□ 15.3
FUSP35637 UBE2K-206ENST00000510934 589 ntTSL 213.77□□□□□ -0.211e-8■■■□□ 15.3
FUSP35637 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.28□□□□□ -0.281e-8■■■□□ 15.3
FUSP35637 UBE2K-202ENST00000438068 2262 ntTSL 212.04□□□□□ -0.481e-8■■■□□ 15.3
FUSP35637 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC11.99□□□□□ -0.491e-8■■■□□ 15.3
FUSP35637 UBE2K-205ENST00000510719 566 ntTSL 35.61□□□□□ -1.511e-8■■■□□ 15.3
FUSP35637 KDM4B-207ENST00000588961 560 ntTSL 45.64□□□□□ -1.511e-6■■■□□ 15.2
FUSP35637 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.652e-6■■■□□ 15.2
FUSP35637 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.12e-6■■■□□ 15.2
FUSP35637 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.351e-6■■■□□ 15.2
FUSP35637 KLHDC4-207ENST00000562155 1757 ntTSL 512.84□□□□□ -0.351e-6■■■□□ 15.2
FUSP35637 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.381e-6■■■□□ 15.2
FUSP35637 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.63□□□□□ -0.391e-6■■■□□ 15.2
FUSP35637 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.28□□□□□ -0.441e-6■■■□□ 15.2
FUSP35637 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)12.16□□□□□ -0.461e-6■■■□□ 15.2
FUSP35637 KLHDC4-217ENST00000566661 2232 ntTSL 511.22□□□□□ -0.611e-6■■■□□ 15.2
FUSP35637 KLHDC4-218ENST00000567298 4572 ntTSL 511.16□□□□□ -0.621e-6■■■□□ 15.2
FUSP35637 KLHDC4-208ENST00000562261 1065 ntTSL 310.26□□□□□ -0.771e-6■■■□□ 15.2
FUSP35637 KLHDC4-212ENST00000564396 563 ntTSL 59.83□□□□□ -0.841e-6■■■□□ 15.2
FUSP35637 KLHDC4-226ENST00000569747 560 ntTSL 49.22□□□□□ -0.931e-6■■■□□ 15.2
FUSP35637 KLHDC4-214ENST00000565328 582 ntTSL 49.21□□□□□ -0.941e-6■■■□□ 15.2
FUSP35637 KLHDC4-213ENST00000564484 562 ntTSL 57.04□□□□□ -1.281e-6■■■□□ 15.2
FUSP35637 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.148e-7■■■□□ 15.2
FUSP35637 UBE2J2-208ENST00000450390 2455 ntTSL 513.93□□□□□ -0.188e-7■■■□□ 15.2
FUSP35637 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC13.53□□□□□ -0.248e-7■■■□□ 15.2
FUSP35637 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.273e-8■■■□□ 15.2
FUSP35637 SYNJ2-202ENST00000367112 5091 ntTSL 27.97□□□□□ -1.131e-8■■■□□ 15.2
FUSP35637 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC7.45□□□□□ -1.221e-8■■■□□ 15.2
FUSP35637 SYNJ2-204ENST00000367122 3029 ntTSL 1 (best) BASIC7.08□□□□□ -1.281e-8■■■□□ 15.2
FUSP35637 NEDD9-203ENST00000397378 470 ntTSL 36.6□□□□□ -1.351e-8■■■□□ 15.2
FUSP35637 NEDD9-214ENST00000513989 587 ntTSL 46.54□□□□□ -1.361e-8■■■□□ 15.2
FUSP35637 NEDD9-211ENST00000508546 581 ntTSL 56.44□□□□□ -1.381e-8■■■□□ 15.2
FUSP35637 NEDD9-204ENST00000448183 4934 ntTSL 1 (best)6.04□□□□□ -1.441e-8■■■□□ 15.2
FUSP35637 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.591e-8■■■□□ 15.2
FUSP35637 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC4.96□□□□□ -1.621e-8■■■□□ 15.2
FUSP35637 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.671e-8■■■□□ 15.2
FUSP35637 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.722e-9■■■□□ 15.2
FUSP35637 UBE2G2-206ENST00000481546 4340 ntTSL 1 (best)6.26□□□□□ -1.412e-9■■■□□ 15.2
FUSP35637 NSUN2-203ENST00000504374 3217 ntTSL 211.23□□□□□ -0.618e-7■■■□□ 15.2
FUSP35637 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.718e-7■■■□□ 15.2
FUSP35637 NSUN2-208ENST00000513888 1290 ntTSL 210.33□□□□□ -0.768e-7■■■□□ 15.2
FUSP35637 NSUN2-205ENST00000505892 3558 ntTSL 1 (best)5.64□□□□□ -1.518e-7■■■□□ 15.2
FUSP35637 AGRN-203ENST00000461111 3385 ntTSL 1 (best)8.52□□□□□ -1.059e-7■■■□□ 15.1
FUSP35637 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.263e-7■■■□□ 15.1
FUSP35637 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.713e-7■■■□□ 15.1
FUSP35637 LENG8-203ENST00000421200 594 ntTSL 39.98□□□□□ -0.813e-7■■■□□ 15.1
FUSP35637 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.531e-6■■■□□ 15.1
FUSP35637 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.72□□□□□ -0.531e-6■■■□□ 15.1
FUSP35637 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.861e-6■■■□□ 15.1
FUSP35637 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.931e-6■■■□□ 15.1
FUSP35637 SHANK3-202ENST00000414786 7394 ntTSL 514.67□□□□□ -0.062e-6■■■□□ 15.1
FUSP35637 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.092e-6■■■□□ 15.1
FUSP35637 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.462e-6■■■□□ 15.1
FUSP35637 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.53■□□□□ 0.729e-7■■■□□ 15.1
FUSP35637 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.249e-7■■■□□ 15.1
FUSP35637 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.29e-7■■■□□ 15.1
FUSP35637 PQLC1-206ENST00000474967 2319 ntTSL 512.7□□□□□ -0.389e-7■■■□□ 15.1
FUSP35637 PQLC1-201ENST00000351365 2414 ntTSL 211.96□□□□□ -0.59e-7■■■□□ 15.1
FUSP35637 PQLC1-204ENST00000466449 2887 ntTSL 211.09□□□□□ -0.639e-7■■■□□ 15.1
FUSP35637 PQLC1-205ENST00000469369 593 ntTSL 49.25□□□□□ -0.939e-7■■■□□ 15.1
FUSP35637 PQLC1-209ENST00000589000 558 ntTSL 47.72□□□□□ -1.179e-7■■■□□ 15.1
FUSP35637 RCC1-209ENST00000430407 1121 ntTSL 511.86□□□□□ -0.511e-6■■■□□ 15.1
FUSP35637 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.61e-6■■■□□ 15.1
FUSP35637 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC9.38□□□□□ -0.911e-6■■■□□ 15.1
FUSP35637 RCC1-205ENST00000411533 1169 ntTSL 59.36□□□□□ -0.911e-6■■■□□ 15.1
FUSP35637 RCC1-207ENST00000427469 903 ntTSL 58.79□□□□□ -11e-6■■■□□ 15.1
FUSP35637 RCC1-210ENST00000434290 1070 ntTSL 58.69□□□□□ -1.021e-6■■■□□ 15.1
FUSP35637 RCC1-206ENST00000419074 997 ntTSL 58.59□□□□□ -1.031e-6■■■□□ 15.1
FUSP35637 RCC1-208ENST00000429051 538 ntTSL 37.67□□□□□ -1.181e-6■■■□□ 15.1
FUSP35637 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.211e-6■■■□□ 15.1
FUSP35637 DGCR2-204ENST00000473832 606 ntTSL 57.18□□□□□ -1.267e-7■■■□□ 15.1
FUSP35637 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.271e-6■■■□□ 15.1
FUSP35637 TCF25-207ENST00000562256 1879 ntTSL 1 (best)11.88□□□□□ -0.512e-7■■■□□ 15.1
FUSP35637 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC10.88□□□□□ -0.672e-7■■■□□ 15.1
FUSP35637 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.672e-7■■■□□ 15.1
FUSP35637 TCF25-226ENST00000640279 2688 ntTSL 510.63□□□□□ -0.712e-7■■■□□ 15.1
FUSP35637 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.62e-6■■■□□ 15.1
FUSP35637 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.752e-6■■■□□ 15.1
FUSP35637 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.752e-6■■■□□ 15.1
FUSP35637 RERE-207ENST00000464972 743 ntTSL 55.83□□□□□ -1.482e-6■■■□□ 15.1
FUSP35637 RERE-203ENST00000400907 2973 ntTSL 5 BASIC5.22□□□□□ -1.572e-6■■■□□ 15.1
FUSP35637 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.053e-6■■■□□ 15.1
FUSP35637 SLC22A18-210ENST00000492567 684 ntTSL 213.12□□□□□ -0.313e-6■■■□□ 15.1
FUSP35637 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.433e-6■■■□□ 15.1
FUSP35637 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.493e-6■■■□□ 15.1
FUSP35637 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.05□□□□□ -0.643e-6■■■□□ 15.1
FUSP35637 CXXC5-209ENST00000507139 472 ntTSL 414.66□□□□□ -0.062e-6■■■□□ 15.1
Retrieved 100 of 7,397 protein–RNA pairs in 608.2 ms