RNA–Protein interactions for RNA: ENST00000397778.6

PQLC1-203, Transcript of PQ loop repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PQLC1, Length 2,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC1-203ENST00000397778 NISCHQ9Y2I1 1504 aa54.36■■■■■ 6.29
PQLC1-203ENST00000397778 SHROOM4Q9ULL8 1493 aa46.48■■■■■ 5.03
PQLC1-203ENST00000397778 CCDC180Q9P1Z9 1646 aa46.1■■■■■ 4.97
PQLC1-203ENST00000397778 ZCCHC6Q5VYS8 1495 aaKnown RBP45.9■■■■■ 4.94
PQLC1-203ENST00000397778 SUPT5HO00267 1087 aaKnown RBP45.47■■■■■ 4.87
PQLC1-203ENST00000397778 DCAF8L2P0C7V8 631 aa45.45■■■■■ 4.87
PQLC1-203ENST00000397778 DCAF1Q9Y4B6 1507 aa44.44■■■■■ 4.7
PQLC1-203ENST00000397778 CHIC1Q5VXU3 224 aa44.04■■■■■ 4.64
PQLC1-203ENST00000397778 MYO15BQ96JP2 1530 aa43.82■■■■■ 4.61
PQLC1-203ENST00000397778 SCRIBQ14160 1630 aa43.43■■■■■ 4.54
PQLC1-203ENST00000397778 ABCC9O60706 1549 aa43.24■■■■■ 4.51
PQLC1-203ENST00000397778 RSF1Q96T23 1441 aaPredicted RBP43.03■■■■■ 4.48
PQLC1-203ENST00000397778 LOC105371045A0A1W2PR82 267 aa42.88■■■■■ 4.45
PQLC1-203ENST00000397778 NACADO15069 1562 aa42.76■■■■■ 4.44
PQLC1-203ENST00000397778 CECR2Q9BXF3 1484 aa42.6■■■■■ 4.41
PQLC1-203ENST00000397778 RB1CC1Q8TDY2 1594 aa42.5■■■■■ 4.39
PQLC1-203ENST00000397778 PCGF6Q9BYE7 350 aa42.49■■■■■ 4.39
PQLC1-203ENST00000397778 MROH2BQ7Z745 1585 aa42.35■■■■■ 4.37
PQLC1-203ENST00000397778 TRIM41Q8WV44 630 aa42.26■■■■■ 4.35
PQLC1-203ENST00000397778 HRCP23327 699 aa42.21■■■■■ 4.35
PQLC1-203ENST00000397778 WIZO95785 1651 aa42.09■■■■■ 4.33
PQLC1-203ENST00000397778 FAM9AQ8IZU1 332 aaPredicted RBP42.07■■■■■ 4.33
PQLC1-203ENST00000397778 EHMT2Q96KQ7 1210 aa41.83■■■■■ 4.29
PQLC1-203ENST00000397778 BAZ1AQ9NRL2 1556 aaPredicted RBP41.69■■■■■ 4.26
PQLC1-203ENST00000397778 PPARGC1BQ86YN6 1023 aaKnown RBP41.63■■■■■ 4.25
PQLC1-203ENST00000397778 TRIM26Q12899 539 aaPredicted RBP41.58■■■■■ 4.25
PQLC1-203ENST00000397778 UNC13AQ9UPW8 1703 aa41.58■■■■■ 4.25
PQLC1-203ENST00000397778 PABPN1Q86U42 306 aaKnown RBP eCLIP41.46■■■■■ 4.23
PQLC1-203ENST00000397778 SMARCA4P51532 1647 aa41.41■■■■■ 4.22
PQLC1-203ENST00000397778 EIF4G1Q04637 1599 aaKnown RBP41.31■■■■■ 4.2
PQLC1-203ENST00000397778 TOP2AP11388 1531 aaKnown RBP41.29■■■■■ 4.2
PQLC1-203ENST00000397778 CCDC88BA6NC98 1476 aa41.27■■■■■ 4.2
PQLC1-203ENST00000397778 BICRAQ9NZM4 1560 aa41.13■■■■■ 4.18
PQLC1-203ENST00000397778 SMARCA2P51531 1590 aa41.13■■■■■ 4.17
PQLC1-203ENST00000397778 ABCC8Q09428 1581 aa41.13■■■■■ 4.17
PQLC1-203ENST00000397778 SOGA1O94964 1423 aa40.75■■■■■ 4.11
PQLC1-203ENST00000397778 RUSC2Q8N2Y8 1516 aa40.61■■■■■ 4.09
PQLC1-203ENST00000397778 PEG3Q9GZU2 1588 aa40.55■■■■■ 4.08
PQLC1-203ENST00000397778 ATAD2BQ9ULI0 1458 aa40.48■■■■■ 4.07
PQLC1-203ENST00000397778 CSRNP3Q8WYN3 585 aa40.44■■■■■ 4.06
PQLC1-203ENST00000397778 ZEB1P37275 1124 aaPredicted RBP40.39■■■■■ 4.06
PQLC1-203ENST00000397778 WRNQ14191 1432 aaPredicted RBP eCLIP40.37■■■■■ 4.05
PQLC1-203ENST00000397778 TTBK1Q5TCY1 1321 aaPredicted RBP40.37■■■■■ 4.05
PQLC1-203ENST00000397778 CEP162Q5TB80 1403 aa40.34■■■■■ 4.05
PQLC1-203ENST00000397778 UBTFP17480 764 aaKnown RBP40.31■■■■■ 4.04
PQLC1-203ENST00000397778 BAZ1BQ9UIG0 1483 aaKnown RBP40.31■■■■■ 4.04
PQLC1-203ENST00000397778 TNIKQ9UKE5 1360 aa40.25■■■■■ 4.03
PQLC1-203ENST00000397778 SYNJ1O43426 1573 aa40.2■■■■■ 4.03
PQLC1-203ENST00000397778 EEA1Q15075 1411 aa40.19■■■■■ 4.02
PQLC1-203ENST00000397778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.16■■■■■ 4.02
PQLC1-203ENST00000397778 GOLGA3Q08378 1498 aa40.01■■■■■ 4
PQLC1-203ENST00000397778 CCER1Q8TC90 406 aaPredicted RBP39.9■■■■□ 3.98
PQLC1-203ENST00000397778 CEP164Q9UPV0 1460 aa39.8■■■■□ 3.96
PQLC1-203ENST00000397778 RANGAP1P46060 587 aaPredicted RBP39.75■■■■□ 3.95
PQLC1-203ENST00000397778 RAPGEF2Q9Y4G8 1499 aa39.71■■■■□ 3.95
PQLC1-203ENST00000397778 KIF21BO75037 1637 aa39.69■■■■□ 3.94
PQLC1-203ENST00000397778 NCAPD3P42695 1498 aa39.68■■■■□ 3.94
PQLC1-203ENST00000397778 CLIP1P30622 1438 aa39.63■■■■□ 3.93
PQLC1-203ENST00000397778 TOP2BQ02880 1626 aa39.63■■■■□ 3.93
PQLC1-203ENST00000397778 HMGXB3Q12766 1538 aa39.54■■■■□ 3.92
PQLC1-203ENST00000397778 BIVM-ERCC5R4GMW8 1640 aa39.44■■■■□ 3.9
PQLC1-203ENST00000397778 CUX1P39880 1505 aa39.4■■■■□ 3.9
PQLC1-203ENST00000397778 VPS8Q8N3P4 1428 aa39.38■■■■□ 3.89
PQLC1-203ENST00000397778 HNRNPUL2Q1KMD3 747 aaKnown RBP39.35■■■■□ 3.89
PQLC1-203ENST00000397778 CFTRP13569 1480 aa39.32■■■■□ 3.89
PQLC1-203ENST00000397778 PRXQ9BXM0 1461 aa39.26■■■■□ 3.87
PQLC1-203ENST00000397778 APLP2Q06481 763 aa39.22■■■■□ 3.87
PQLC1-203ENST00000397778 KIF27Q86VH2 1401 aa39.1■■■■□ 3.85
PQLC1-203ENST00000397778 ERICH3Q5RHP9 1530 aa39.09■■■■□ 3.85
PQLC1-203ENST00000397778 ARAP1Q96P48 1450 aa39.03■■■■□ 3.84
PQLC1-203ENST00000397778 KANK4Q5T7N3 995 aaPredicted RBP38.98■■■■□ 3.83
PQLC1-203ENST00000397778 DIEXFQ68CQ4 756 aaKnown RBP38.98■■■■□ 3.83
PQLC1-203ENST00000397778 CADPSQ9ULU8 1353 aa38.96■■■■□ 3.83
PQLC1-203ENST00000397778 CUX2O14529 1486 aa38.85■■■■□ 3.81
PQLC1-203ENST00000397778 IGF1RP08069 1367 aa38.83■■■■□ 3.81
PQLC1-203ENST00000397778 SCAF1Q9H7N4 1312 aaKnown RBP38.83■■■■□ 3.81
PQLC1-203ENST00000397778 CC2D2AQ9P2K1 1620 aa38.83■■■■□ 3.81
PQLC1-203ENST00000397778 PRDM2Q13029 1718 aa38.76■■■■□ 3.79
PQLC1-203ENST00000397778 ARHGAP35Q9NRY4 1499 aa38.75■■■■□ 3.79
PQLC1-203ENST00000397778 ZNF316A6NFI3 1004 aaPredicted RBP38.73■■■■□ 3.79
PQLC1-203ENST00000397778 FGD5Q6ZNL6 1462 aa38.72■■■■□ 3.79
PQLC1-203ENST00000397778 CARMIL1Q5VZK9 1371 aa38.62■■■■□ 3.77
PQLC1-203ENST00000397778 FANCD2Q9BXW9 1451 aa38.57■■■■□ 3.77
PQLC1-203ENST00000397778 NEUROD1Q13562 356 aa38.56■■■■□ 3.76
PQLC1-203ENST00000397778 NESP48681 1621 aa38.52■■■■□ 3.76
PQLC1-203ENST00000397778 RAD54L2Q9Y4B4 1467 aa38.47■■■■□ 3.75
PQLC1-203ENST00000397778 ACIN1Q9UKV3 1341 aaKnown RBP38.46■■■■□ 3.75
PQLC1-203ENST00000397778 P3H3Q8IVL6 736 aa38.44■■■■□ 3.74
PQLC1-203ENST00000397778 ITGAEP38570 1179 aa38.43■■■■□ 3.74
PQLC1-203ENST00000397778 RRBP1Q9P2E9 1410 aaKnown RBP38.42■■■■□ 3.74
PQLC1-203ENST00000397778 DHX57Q6P158 1386 aaKnown RBP38.42■■■■□ 3.74
PQLC1-203ENST00000397778 DNAJC5BQ9UF47 199 aa38.34■■■■□ 3.73
PQLC1-203ENST00000397778 CCNB3Q8WWL7 1395 aa38.33■■■■□ 3.73
PQLC1-203ENST00000397778 POLA1P09884 1462 aaPredicted RBP38.29■■■■□ 3.72
PQLC1-203ENST00000397778 TOPBP1Q92547 1522 aa38.29■■■■□ 3.72
PQLC1-203ENST00000397778 MIER1Q8N108 512 aa38.27■■■■□ 3.72
PQLC1-203ENST00000397778 DNMBPQ6XZF7 1577 aa38.26■■■■□ 3.71
PQLC1-203ENST00000397778 ATP1B4Q9UN42 357 aaPredicted RBP38.23■■■■□ 3.71
PQLC1-203ENST00000397778 ABCA10Q8WWZ4 1543 aa38.19■■■■□ 3.7
PQLC1-203ENST00000397778 TIAM1Q13009 1591 aa38.18■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms