RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
AGRN-203ENST00000461111 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
AGRN-203ENST00000461111 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
AGRN-203ENST00000461111 HRCP23327 699 aa21.02■□□□□ 0.96
AGRN-203ENST00000461111 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
AGRN-203ENST00000461111 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
AGRN-203ENST00000461111 DCAF8L2P0C7V8 631 aa20.83■□□□□ 0.93
AGRN-203ENST00000461111 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
AGRN-203ENST00000461111 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
AGRN-203ENST00000461111 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
AGRN-203ENST00000461111 EHMT2Q96KQ7 1210 aa20.13■□□□□ 0.81
AGRN-203ENST00000461111 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
AGRN-203ENST00000461111 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
AGRN-203ENST00000461111 TRIM26Q12899 539 aaPredicted RBP19.85■□□□□ 0.77
AGRN-203ENST00000461111 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
AGRN-203ENST00000461111 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
AGRN-203ENST00000461111 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.73
AGRN-203ENST00000461111 CCDC180Q9P1Z9 1646 aa19.55■□□□□ 0.72
AGRN-203ENST00000461111 NEUROD1Q13562 356 aa19.53■□□□□ 0.72
AGRN-203ENST00000461111 MYT1Q01538 1121 aa19.51■□□□□ 0.71
AGRN-203ENST00000461111 GTF3C3Q9Y5Q9 886 aa19.5■□□□□ 0.71
AGRN-203ENST00000461111 ACIN1Q9UKV3 1341 aaKnown RBP19.49■□□□□ 0.71
AGRN-203ENST00000461111 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
AGRN-203ENST00000461111 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
AGRN-203ENST00000461111 CENPBP07199 599 aaPredicted RBP19.3■□□□□ 0.68
AGRN-203ENST00000461111 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
AGRN-203ENST00000461111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
AGRN-203ENST00000461111 CCER1Q8TC90 406 aaPredicted RBP19.24■□□□□ 0.67
AGRN-203ENST00000461111 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
AGRN-203ENST00000461111 DIEXFQ68CQ4 756 aaKnown RBP19.19■□□□□ 0.66
AGRN-203ENST00000461111 RANGAP1P46060 587 aaPredicted RBP18.78■□□□□ 0.6
AGRN-203ENST00000461111 MIER1Q8N108 512 aa18.71■□□□□ 0.59
AGRN-203ENST00000461111 ZNF316A6NFI3 1004 aaPredicted RBP18.7■□□□□ 0.58
AGRN-203ENST00000461111 UBTFP17480 764 aaKnown RBP18.65■□□□□ 0.58
AGRN-203ENST00000461111 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
AGRN-203ENST00000461111 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
AGRN-203ENST00000461111 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
AGRN-203ENST00000461111 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
AGRN-203ENST00000461111 ANP32EQ9BTT0 268 aa18.43■□□□□ 0.54
AGRN-203ENST00000461111 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
AGRN-203ENST00000461111 ABCC9O60706 1549 aa18.38■□□□□ 0.53
AGRN-203ENST00000461111 BCANQ96GW7 911 aa18.38■□□□□ 0.53
AGRN-203ENST00000461111 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
AGRN-203ENST00000461111 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
AGRN-203ENST00000461111 TSHZ2Q9NRE2 1034 aa18.34■□□□□ 0.53
AGRN-203ENST00000461111 APLP2Q06481 763 aa18.34■□□□□ 0.53
AGRN-203ENST00000461111 CECR2Q9BXF3 1484 aa18.28■□□□□ 0.52
AGRN-203ENST00000461111 ITGAEP38570 1179 aa18.19■□□□□ 0.5
AGRN-203ENST00000461111 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.49
AGRN-203ENST00000461111 FKBP8Q14318 412 aa18.07■□□□□ 0.48
AGRN-203ENST00000461111 NACADO15069 1562 aa18.06■□□□□ 0.48
AGRN-203ENST00000461111 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
AGRN-203ENST00000461111 CEP162Q5TB80 1403 aa18.06■□□□□ 0.48
AGRN-203ENST00000461111 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
AGRN-203ENST00000461111 SOGA1O94964 1423 aa18.03■□□□□ 0.48
AGRN-203ENST00000461111 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
AGRN-203ENST00000461111 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
AGRN-203ENST00000461111 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
AGRN-203ENST00000461111 RBM19Q9Y4C8 960 aaKnown RBP17.95■□□□□ 0.46
AGRN-203ENST00000461111 WIZO95785 1651 aa17.93■□□□□ 0.46
AGRN-203ENST00000461111 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
AGRN-203ENST00000461111 NEFLP07196 543 aa17.9■□□□□ 0.46
AGRN-203ENST00000461111 ERICH6Q7L0X2 663 aa17.9■□□□□ 0.46
AGRN-203ENST00000461111 RUSC2Q8N2Y8 1516 aa17.89■□□□□ 0.45
AGRN-203ENST00000461111 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
AGRN-203ENST00000461111 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
AGRN-203ENST00000461111 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
AGRN-203ENST00000461111 PRKCSHP14314 528 aaPredicted RBP17.79■□□□□ 0.44
AGRN-203ENST00000461111 HIRIP3Q9BW71 556 aaPredicted RBP17.78■□□□□ 0.44
AGRN-203ENST00000461111 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
AGRN-203ENST00000461111 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
AGRN-203ENST00000461111 MSH5O43196 834 aa17.76■□□□□ 0.43
AGRN-203ENST00000461111 IRX6P78412 446 aaPredicted RBP17.72■□□□□ 0.43
AGRN-203ENST00000461111 CLIP1P30622 1438 aa17.72■□□□□ 0.43
AGRN-203ENST00000461111 FAM50AQ14320 339 aaKnown RBP17.63■□□□□ 0.41
AGRN-203ENST00000461111 GOLGA3Q08378 1498 aa17.63■□□□□ 0.41
AGRN-203ENST00000461111 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
AGRN-203ENST00000461111 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
AGRN-203ENST00000461111 CNGB1Q14028 1251 aaPredicted RBP17.6■□□□□ 0.41
AGRN-203ENST00000461111 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
AGRN-203ENST00000461111 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
AGRN-203ENST00000461111 DEKP35659 375 aaKnown RBP17.58■□□□□ 0.4
AGRN-203ENST00000461111 NBR1Q14596 966 aa17.57■□□□□ 0.4
AGRN-203ENST00000461111 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
AGRN-203ENST00000461111 SIN3AQ96ST3 1273 aa17.52■□□□□ 0.4
AGRN-203ENST00000461111 ANO8Q9HCE9 1232 aaPredicted RBP17.52■□□□□ 0.4
AGRN-203ENST00000461111 ANP32CO43423 234 aa17.49■□□□□ 0.39
AGRN-203ENST00000461111 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
AGRN-203ENST00000461111 EEA1Q15075 1411 aa17.46■□□□□ 0.39
AGRN-203ENST00000461111 VPS8Q8N3P4 1428 aa17.44■□□□□ 0.38
AGRN-203ENST00000461111 RAPGEF2Q9Y4G8 1499 aa17.44■□□□□ 0.38
AGRN-203ENST00000461111 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
AGRN-203ENST00000461111 HNRNPUQ00839 825 aaKnown RBP eCLIP17.43■□□□□ 0.38
AGRN-203ENST00000461111 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
AGRN-203ENST00000461111 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
AGRN-203ENST00000461111 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
AGRN-203ENST00000461111 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
AGRN-203ENST00000461111 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
AGRN-203ENST00000461111 SENP3-EIF4A1A0A087X0R7 540 aa17.36■□□□□ 0.37
AGRN-203ENST00000461111 B4GALNT3Q6L9W6 998 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms