RNA–Protein interactions for RNA: ENST00000640279.1

TCF25-226, Transcript of transcription factor 25, humanhuman

TSL 5

Gene TCF25, Length 2,688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF25-226ENST00000640279 NISCHQ9Y2I1 1504 aa32.06■■■□□ 2.72
TCF25-226ENST00000640279 SHROOM4Q9ULL8 1493 aa27.7■■■□□ 2.02
TCF25-226ENST00000640279 CCDC180Q9P1Z9 1646 aa27.65■■■□□ 2.02
TCF25-226ENST00000640279 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
TCF25-226ENST00000640279 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
TCF25-226ENST00000640279 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
TCF25-226ENST00000640279 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
TCF25-226ENST00000640279 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
TCF25-226ENST00000640279 HRCP23327 699 aa26.37■■□□□ 1.81
TCF25-226ENST00000640279 DCAF1Q9Y4B6 1507 aa26.37■■□□□ 1.81
TCF25-226ENST00000640279 PELP1Q8IZL8 1130 aaKnown RBP26.26■■□□□ 1.79
TCF25-226ENST00000640279 PCGF6Q9BYE7 350 aa26.24■■□□□ 1.79
TCF25-226ENST00000640279 ABCC9O60706 1549 aa26.15■■□□□ 1.78
TCF25-226ENST00000640279 LOC105371045A0A1W2PR82 267 aa25.96■■□□□ 1.75
TCF25-226ENST00000640279 PPARGC1BQ86YN6 1023 aaKnown RBP25.9■■□□□ 1.74
TCF25-226ENST00000640279 SCRIBQ14160 1630 aa25.71■■□□□ 1.71
TCF25-226ENST00000640279 NACADO15069 1562 aa25.71■■□□□ 1.71
TCF25-226ENST00000640279 MYT1Q01538 1121 aa25.67■■□□□ 1.7
TCF25-226ENST00000640279 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
TCF25-226ENST00000640279 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
TCF25-226ENST00000640279 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
TCF25-226ENST00000640279 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
TCF25-226ENST00000640279 FAM9AQ8IZU1 332 aaPredicted RBP25.28■■□□□ 1.64
TCF25-226ENST00000640279 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.62
TCF25-226ENST00000640279 ZEB1P37275 1124 aaPredicted RBP25.08■■□□□ 1.6
TCF25-226ENST00000640279 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
TCF25-226ENST00000640279 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
TCF25-226ENST00000640279 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
TCF25-226ENST00000640279 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.568e-8■■■□□ 18.6
TCF25-226ENST00000640279 BICRAQ9NZM4 1560 aa24.81■■□□□ 1.56
TCF25-226ENST00000640279 WIZO95785 1651 aa24.75■■□□□ 1.55
TCF25-226ENST00000640279 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
TCF25-226ENST00000640279 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
TCF25-226ENST00000640279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.57■■□□□ 1.52
TCF25-226ENST00000640279 SCAF1Q9H7N4 1312 aaKnown RBP24.56■■□□□ 1.52
TCF25-226ENST00000640279 CCER1Q8TC90 406 aaPredicted RBP24.49■■□□□ 1.51
TCF25-226ENST00000640279 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
TCF25-226ENST00000640279 TTBK1Q5TCY1 1321 aaPredicted RBP24.42■■□□□ 1.5
TCF25-226ENST00000640279 ABCC8Q09428 1581 aa24.38■■□□□ 1.49
TCF25-226ENST00000640279 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
TCF25-226ENST00000640279 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
TCF25-226ENST00000640279 CEP162Q5TB80 1403 aa24.24■■□□□ 1.47
TCF25-226ENST00000640279 SOGA1O94964 1423 aa24.24■■□□□ 1.47
TCF25-226ENST00000640279 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.472e-6■■■□□ 15
TCF25-226ENST00000640279 SMARCA2P51531 1590 aa24.2■■□□□ 1.46
TCF25-226ENST00000640279 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
TCF25-226ENST00000640279 DIEXFQ68CQ4 756 aaKnown RBP24.18■■□□□ 1.46
TCF25-226ENST00000640279 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
TCF25-226ENST00000640279 NEUROD1Q13562 356 aa24.17■■□□□ 1.46
TCF25-226ENST00000640279 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.46
TCF25-226ENST00000640279 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
TCF25-226ENST00000640279 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
TCF25-226ENST00000640279 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
TCF25-226ENST00000640279 RUSC2Q8N2Y8 1516 aa24.11■■□□□ 1.45
TCF25-226ENST00000640279 EEA1Q15075 1411 aa24.02■■□□□ 1.44
TCF25-226ENST00000640279 BAZ1BQ9UIG0 1483 aaKnown RBP23.98■■□□□ 1.43
TCF25-226ENST00000640279 CENPBP07199 599 aaPredicted RBP23.97■■□□□ 1.43
TCF25-226ENST00000640279 GTF3C3Q9Y5Q9 886 aa23.96■■□□□ 1.43
TCF25-226ENST00000640279 GOLGA3Q08378 1498 aa23.93■■□□□ 1.42
TCF25-226ENST00000640279 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
TCF25-226ENST00000640279 HNRNPUL2Q1KMD3 747 aaKnown RBP23.84■■□□□ 1.41
TCF25-226ENST00000640279 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
TCF25-226ENST00000640279 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
TCF25-226ENST00000640279 HMGXB3Q12766 1538 aa23.75■■□□□ 1.39
TCF25-226ENST00000640279 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
TCF25-226ENST00000640279 CLIP1P30622 1438 aa23.73■■□□□ 1.39
TCF25-226ENST00000640279 YTHDC1Q96MU7 727 aaKnown RBP23.72■■□□□ 1.39
TCF25-226ENST00000640279 RANGAP1P46060 587 aaPredicted RBP23.69■■□□□ 1.38
TCF25-226ENST00000640279 KIF21BO75037 1637 aa23.66■■□□□ 1.38
TCF25-226ENST00000640279 APLP2Q06481 763 aa23.64■■□□□ 1.37
TCF25-226ENST00000640279 MIER1Q8N108 512 aa23.64■■□□□ 1.37
TCF25-226ENST00000640279 VPS8Q8N3P4 1428 aa23.63■■□□□ 1.37
TCF25-226ENST00000640279 RAPGEF2Q9Y4G8 1499 aa23.6■■□□□ 1.37
TCF25-226ENST00000640279 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.37
TCF25-226ENST00000640279 BCL11AQ9H165 835 aa23.46■■□□□ 1.35
TCF25-226ENST00000640279 CFTRP13569 1480 aa23.39■■□□□ 1.34
TCF25-226ENST00000640279 TOP2BQ02880 1626 aa23.35■■□□□ 1.33
TCF25-226ENST00000640279 KANK4Q5T7N3 995 aaPredicted RBP23.32■■□□□ 1.32
TCF25-226ENST00000640279 DHX57Q6P158 1386 aaKnown RBP23.3■■□□□ 1.32
TCF25-226ENST00000640279 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
TCF25-226ENST00000640279 PRKCSHP14314 528 aaPredicted RBP23.27■■□□□ 1.32
TCF25-226ENST00000640279 PRXQ9BXM0 1461 aa23.27■■□□□ 1.32
TCF25-226ENST00000640279 CADPSQ9ULU8 1353 aa23.25■■□□□ 1.31
TCF25-226ENST00000640279 CLSPNQ9HAW4 1339 aa23.25■■□□□ 1.31
TCF25-226ENST00000640279 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
TCF25-226ENST00000640279 CUX1P39880 1505 aa23.22■■□□□ 1.31
TCF25-226ENST00000640279 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
TCF25-226ENST00000640279 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
TCF25-226ENST00000640279 PRDM2Q13029 1718 aa23.15■■□□□ 1.3
TCF25-226ENST00000640279 RRBP1Q9P2E9 1410 aaKnown RBP23.11■■□□□ 1.29
TCF25-226ENST00000640279 ITGAEP38570 1179 aa23.11■■□□□ 1.29
TCF25-226ENST00000640279 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
TCF25-226ENST00000640279 NESP48681 1621 aa23.1■■□□□ 1.29
TCF25-226ENST00000640279 ERICH6Q7L0X2 663 aa23.07■■□□□ 1.28
TCF25-226ENST00000640279 CCNB3Q8WWL7 1395 aa23.05■■□□□ 1.28
TCF25-226ENST00000640279 ARHGAP35Q9NRY4 1499 aa23.03■■□□□ 1.28
TCF25-226ENST00000640279 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
TCF25-226ENST00000640279 CUX2O14529 1486 aa22.98■■□□□ 1.27
TCF25-226ENST00000640279 SUPT16HQ9Y5B9 1047 aaKnown RBP22.97■■□□□ 1.27
TCF25-226ENST00000640279 RAB3GAP2Q9H2M9 1393 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms